FFCP PHASE1:Hg19::chr9:21975088..21975104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=P42771 | |UniProt=P42771 | ||
|association_with_transcript=0bp_to_ENST00000304494_5end | |association_with_transcript=0bp_to_ENST00000304494_5end | ||
|cluster_id=chr9:21975088..21975104,- | |||
|coexpression_cluster_id=C1550 | |||
|description=CAGE_peak_11_at_CDKN2A_5end | |description=CAGE_peak_11_at_CDKN2A_5end | ||
|id=chr9:21975088..21975104,- | |id=chr9:21975088..21975104,- | ||
|ontology_enrichment_celltype=CL:0000359!1.40e-14!32;CL:0000548!3.86e-12!679;CL:0000004!3.86e-12!679;CL:0000255!3.86e-12!679;CL:0000012!1.01e-11!682;CL:0000192!1.13e-10!42;CL:0000514!1.13e-10!42;CL:0000003!1.78e-08!722;CL:0000055!4.18e-08!180;CL:0002371!3.50e-07!591;CL:0000680!5.69e-07!57;CL:0000056!5.69e-07!57;CL:0000355!5.69e-07!57 | |ontology_enrichment_celltype=CL:0000359!1.40e-14!32;CL:0000548!3.86e-12!679;CL:0000004!3.86e-12!679;CL:0000255!3.86e-12!679;CL:0000012!1.01e-11!682;CL:0000192!1.13e-10!42;CL:0000514!1.13e-10!42;CL:0000003!1.78e-08!722;CL:0000055!4.18e-08!180;CL:0002371!3.50e-07!591;CL:0000680!5.69e-07!57;CL:0000056!5.69e-07!57;CL:0000355!5.69e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.19e-16;32!CL:0000192;1.54e-09;43!CL:0002595;3.87e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.94e-17,32;CL:0000192,2.03e-12,43;CL:0000514,2.03e-12,43;CL:0000680,2.75e-09,58;CL:0000056,2.75e-09,58;CL:0000355,2.75e-09,58;CL:0002595,2.23e-08,5;CL:0000187,2.58e-08,55;CL:0000393,6.43e-07,61;CL:0000211,6.43e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.31e-17!42;UBERON:0003509!2.31e-17!42;UBERON:0004572!2.31e-17!42;UBERON:0004573!1.26e-13!33;UBERON:0004571!1.26e-13!33;UBERON:0002049!1.26e-12!79;UBERON:0007798!1.26e-12!79;UBERON:0001981!1.31e-12!60;UBERON:0007500!1.31e-12!60;UBERON:0004537!1.31e-12!60;UBERON:0006965!1.31e-12!60;UBERON:0000055!1.04e-11!69;UBERON:0004872!3.19e-09!84;UBERON:0001737!2.32e-08!9;UBERON:0000914!4.99e-08!83;UBERON:0002329!4.99e-08!83;UBERON:0003077!4.99e-08!83;UBERON:0003059!4.99e-08!83;UBERON:0007282!4.99e-08!83;UBERON:0009618!4.99e-08!83;UBERON:0007285!4.99e-08!83;UBERON:0004535!1.05e-07!110;UBERON:0000486!1.25e-07!82;UBERON:0001009!1.79e-07!113;UBERON:0004290!8.86e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.61e-13;9!UBERON:0001557;2.61e-13;9!UBERON:0004573;2.15e-11;33!UBERON:0004571;2.15e-11;33!UBERON:0001637;4.45e-11;42!UBERON:0003509;4.45e-11;42!UBERON:0004572;4.45e-11;42!UBERON:0003834;3.87e-08;5!UBERON:0001533;3.87e-08;5!UBERON:0007500;4.21e-07;56!UBERON:0001981;4.21e-07;56!UBERON:0004537;4.21e-07;56!UBERON:0000072;5.20e-07;37!UBERON:0010371;5.38e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.01e-15,42;UBERON:0003509,1.01e-15,42;UBERON:0004572,1.01e-15,42;UBERON:0004573,7.16e-14,33;UBERON:0004571,7.16e-14,33;UBERON:0001737,1.09e-13,9;UBERON:0000486,3.80e-11,83;UBERON:0007500,5.31e-11,59;UBERON:0001981,5.31e-11,59;UBERON:0004537,5.31e-11,59;UBERON:0006965,5.31e-11,59;UBERON:0002329,1.31e-10,71;UBERON:0003059,1.31e-10,71;UBERON:0007282,1.31e-10,71;UBERON:0004290,1.31e-10,71;UBERON:0009618,1.31e-10,71;UBERON:0007503,2.21e-10,78;UBERON:0003077,2.40e-10,72;UBERON:0007285,2.40e-10,72;UBERON:0007524,4.30e-10,73;UBERON:0000055,2.27e-09,68;UBERON:0002049,1.03e-08,78;UBERON:0007798,1.03e-08,78;UBERON:0003834,2.23e-08,5;UBERON:0001533,2.23e-08,5;UBERON:0001134,2.92e-08,62;UBERON:0002036,2.92e-08,62;UBERON:0003082,2.92e-08,62;UBERON:0002385,8.42e-08,64;UBERON:0001015,8.42e-08,64;UBERON:0000383,8.42e-08,64;UBERON:0004872,2.78e-07,83;UBERON:0008947,4.63e-07,38;UBERON:0003258,4.63e-07,38 | |||
|phase1_expression=0.726713517082227,1.2846031433459,1.69145284915165,1.0007329835313,7.59833860526389,0,0,6.31719873426831,1.82829939739887,0,0,0.218441372130172,0,0.74259811776028,2.65117900582333,3.36162573225888,0.602694528023977,0,0.975865597581014,0,1.22400414746552,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0.795285947051099,0.486634870302636,0.378139268656271,1.77383517970051,0.43917392846563,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0.775250277507987,0.71153252537342,0,0.805658634218294,0.760272105718513,1.46437234528902,0.735326160691737,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,1.49091585508596,2.02608818663328,3.97227542439656,1.43418310374407,0.709336764396714,0,0,4.9333509683432,0,0.404132016209064,0.490385709340376,0.151357427644931,0,0,1.87296046098192,2.2818872861778,3.43731965269142,0,0,0,1.22492502752936,0,0.929932030581889,1.18800285728205,0.247266929278557,0,1.43723628363248,0,0,0.831192346452549,0.438977620880838,0.612975591598039,0,0.680593098960126,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0,0.68205903612839,0,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0,0.57978255948989,0.272746120590835,1.72082757233402,0,0,0,0,0,0,3.12899064659632,2.57296375277154,0,3.25057549622385,5.77503585335668,3.31259040111563,4.21461725195254,1.92808823906786,2.75734931830985,2.61455332910887,2.84724742933316,4.44943316928543,3.13954344200554,3.8474715694639,0,0,0,0,0,0,0,0,0,2.05881372358231,2.19500570817251,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,1.44331342025273,0.231860809950154,3.87448690978212,0.144366447761074,0,0,0,0,0,0,0.148631162288728,2.81201501960331,0.335964256397719,0.141775097242386,0,0,0.383382679165211,0,0.44024217006613,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,2.45616259939778,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0,0,3.91871190177462,9.58686804460323,1.3996218765488,0,0,0,2.15662369942424,0,0,1.88215698667853,1.64381058040307,0.358121926479791,0,0,0,0,1.77866236955724,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,1.62759014219841,0.623912584592421,0.356857977594324,0,0.234282829985426,6.62081419400982,9.09630016223939,0,0,1.10621501125022,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,1.24053903909388,0,0.280660094433074,1.79394808957981,0,2.73451665944133,5.93672265779964,0,0.177561725313127,0.657017248110473,0,0,0,3.40860999515584,0.276242966807689,0.229628896329213,0.182091168006717,1.18011973463482,0,0,0,0,0.633309773357254,1.13733384070897,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0.254876273045038,0,1.34324852833307,0.219259876645935,0,0,0.656029291399411,0.325378394664303,0,2.65551447973196,1.65018999841176,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.382838137483752,0.6069466851333,3.71876439437829,0,1.3940745403212,2.7723022215848,3.19383618190213,0,3.33583594387056,2.28999818787186,0,0.316379424718726,0.571890581771475,0.255897791311334,0,1.90921948755562,3.92474320099615,0,0,0,3.03273722359974,6.34041284692033,1.26377536871694,0,4.6305563029944,3.16950440270266,0.136499911407986,1.27264888758341,1.13008116620243,2.75682671773062,1.99031692572366,4.38450885253763,0,0,3.04365565444056,1.239293992399,1.69017361519345,0.573645408816206,2.06322986127554,0.7133421029625,0,0,0,0,0,0.0962221127255121,1.34060455107157,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,1.2700414963433,0.324621940274555,0.842391534340376,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,7.04935025439248,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.25966373927138,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,1.0241410345695,0,0.236387681767936,3.10269035917318,3.49925536059905,3.81974988853243,0,0,0,0,0,0,2.72346158797475,0.557694977114413,0,3.07643550786903,0,0,0,0,0,0,0,1.72678282034527,0,0,0,0,0,0.317873157960757,0,0.816164040795739,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,2.27687636823834,0,0.347119476670262,0,2.08942095792966,0,0,2.70917727609438,2.77739404927505,3.28461828212837,0,0.176512253383001,0,0,2.58328995213887,0.126621591911757,0.195551382734803,0,0,1.79828648623917,0,0,0.343189995723929,5.90624671751414,0,2.35694034616795,0,0,0,4.04530825862126,0,0.136905378891993,0,0,1.05154941711726,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447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| ||
|short_description=p11@CDKN2A | |short_description=p11@CDKN2A | ||
}} | }} |
Latest revision as of 23:15, 16 September 2015
Short description: | p11@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CDKN2A_5end |
Coexpression cluster: | C1550_Osteoblast_Mesothelial_acute_leukemia_Prostate_Fibroblast_Lens |
Association with transcript: | 0bp_to_ENST00000304494_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | P42771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.94e-17 | 32 |
smooth muscle cell | 2.03e-12 | 43 |
smooth muscle myoblast | 2.03e-12 | 43 |
muscle precursor cell | 2.75e-09 | 58 |
myoblast | 2.75e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.75e-09 | 58 |
smooth muscle cell of the subclavian artery | 2.23e-08 | 5 |
muscle cell | 2.58e-08 | 55 |
electrically responsive cell | 6.43e-07 | 61 |
electrically active cell | 6.43e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 1.01e-15 | 42 |
arterial blood vessel | 1.01e-15 | 42 |
arterial system | 1.01e-15 | 42 |
systemic artery | 7.16e-14 | 33 |
systemic arterial system | 7.16e-14 | 33 |
larynx | 1.09e-13 | 9 |
multilaminar epithelium | 3.80e-11 | 83 |
epithelial tube open at both ends | 5.31e-11 | 59 |
blood vessel | 5.31e-11 | 59 |
blood vasculature | 5.31e-11 | 59 |
vascular cord | 5.31e-11 | 59 |
somite | 1.31e-10 | 71 |
presomitic mesoderm | 1.31e-10 | 71 |
presumptive segmental plate | 1.31e-10 | 71 |
dermomyotome | 1.31e-10 | 71 |
trunk paraxial mesoderm | 1.31e-10 | 71 |
epithelial vesicle | 2.21e-10 | 78 |
paraxial mesoderm | 2.40e-10 | 72 |
presumptive paraxial mesoderm | 2.40e-10 | 72 |
dense mesenchyme tissue | 4.30e-10 | 73 |
vessel | 2.27e-09 | 68 |
vasculature | 1.03e-08 | 78 |
vascular system | 1.03e-08 | 78 |
thoracic segment blood vessel | 2.23e-08 | 5 |
subclavian artery | 2.23e-08 | 5 |
skeletal muscle tissue | 2.92e-08 | 62 |
striated muscle tissue | 2.92e-08 | 62 |
myotome | 2.92e-08 | 62 |
muscle tissue | 8.42e-08 | 64 |
musculature | 8.42e-08 | 64 |
musculature of body | 8.42e-08 | 64 |
splanchnic layer of lateral plate mesoderm | 2.78e-07 | 83 |
respiratory primordium | 4.63e-07 | 38 |
endoderm of foregut | 4.63e-07 | 38 |