FFCP PHASE1:Hg19::chrX:152774275..152774309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=399bp_to_U11686_5end | |association_with_transcript=399bp_to_U11686_5end | ||
|cluster_id=chrX:152774275..152774309,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_3_at_BGN_5end | |description=CAGE_peak_3_at_BGN_5end | ||
|id=chrX:152774275..152774309,+ | |id=chrX:152774275..152774309,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.33e-25!180;CL:0000183!1.69e-15!59;CL:0000187!2.26e-14!54;CL:0000680!8.78e-14!57;CL:0000056!8.78e-14!57;CL:0000355!8.78e-14!57;CL:0000057!1.51e-13!75;CL:0000393!2.74e-13!60;CL:0000211!2.74e-13!60;CL:0000359!4.66e-12!32;CL:0000192!2.43e-11!42;CL:0000514!2.43e-11!42;CL:0000222!3.99e-11!119;CL:0002494!4.78e-08!16 | |ontology_enrichment_celltype=CL:0000055!4.33e-25!180;CL:0000183!1.69e-15!59;CL:0000187!2.26e-14!54;CL:0000680!8.78e-14!57;CL:0000056!8.78e-14!57;CL:0000355!8.78e-14!57;CL:0000057!1.51e-13!75;CL:0000393!2.74e-13!60;CL:0000211!2.74e-13!60;CL:0000359!4.66e-12!32;CL:0000192!2.43e-11!42;CL:0000514!2.43e-11!42;CL:0000222!3.99e-11!119;CL:0002494!4.78e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.81e-10;32!CL:0002494;2.66e-08;16!CL:0000327;6.48e-08;15!CL:0002334;8.93e-08;12!CL:0000192;1.52e-07;43!CL:0000187;2.44e-07;55!CL:0002539;9.02e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.58e-13,76;CL:0000187,1.87e-12,55;CL:0000680,3.41e-11,58;CL:0000056,3.41e-11,58;CL:0000355,3.41e-11,58;CL:0000359,1.59e-10,32;CL:0000393,4.47e-10,61;CL:0000211,4.47e-10,61;CL:0000192,4.02e-09,43;CL:0000514,4.02e-09,43;CL:0000222,1.33e-08,121;CL:0000048,1.55e-08,427;CL:0002494,2.97e-08,16;CL:0000723,6.29e-08,433;CL:0000327,7.07e-08,15;CL:0002334,7.95e-08,12;CL:0000034,3.68e-07,441;CL:0002539,7.03e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.52e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.71e-23!84;UBERON:0002049!6.04e-20!79;UBERON:0007798!6.04e-20!79;UBERON:0001009!2.50e-18!113;UBERON:0004535!3.15e-18!110;UBERON:0000055!1.14e-17!69;UBERON:0001981!1.42e-17!60;UBERON:0007500!1.42e-17!60;UBERON:0004537!1.42e-17!60;UBERON:0006965!1.42e-17!60;UBERON:0001637!8.57e-17!42;UBERON:0003509!8.57e-17!42;UBERON:0004572!8.57e-17!42;UBERON:0003914!9.55e-15!118;UBERON:0000477!1.61e-14!286;UBERON:0004573!1.89e-14!33;UBERON:0004571!1.89e-14!33;UBERON:0002385!2.20e-14!63;UBERON:0001015!2.20e-14!63;UBERON:0000383!2.20e-14!63;UBERON:0001134!2.29e-14!61;UBERON:0002036!2.29e-14!61;UBERON:0003082!2.29e-14!61;UBERON:0004290!4.83e-14!70;UBERON:0000914!7.39e-14!83;UBERON:0002329!7.39e-14!83;UBERON:0003077!7.39e-14!83;UBERON:0003059!7.39e-14!83;UBERON:0007282!7.39e-14!83;UBERON:0009618!7.39e-14!83;UBERON:0007285!7.39e-14!83;UBERON:0004111!2.59e-13!241;UBERON:0000475!4.28e-12!365;UBERON:0000025!5.41e-12!194;UBERON:0000948!1.36e-11!24;UBERON:0005498!1.36e-11!24;UBERON:0004140!1.36e-11!24;UBERON:0009881!1.36e-11!24;UBERON:0004141!1.36e-11!24;UBERON:0003084!1.36e-11!24;UBERON:0007005!1.36e-11!24;UBERON:0004139!1.36e-11!24;UBERON:0004291!1.36e-11!24;UBERON:0007100!3.20e-11!27;UBERON:0000486!1.18e-10!82;UBERON:0005256!2.37e-10!143;UBERON:0000119!3.22e-10!312;UBERON:0000947!1.73e-09!21;UBERON:0010191!1.73e-09!21;UBERON:0000483!1.78e-09!309;UBERON:0000490!1.79e-08!138;UBERON:0000468!3.30e-08!659;UBERON:0000481!4.58e-08!347;UBERON:0002100!1.93e-07!216;UBERON:0007023!8.43e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.34e-12;33!UBERON:0004571;4.34e-12;33!UBERON:0000948;5.38e-12;22!UBERON:0007100;6.65e-12;25!UBERON:0001637;2.99e-11;42!UBERON:0003509;2.99e-11;42!UBERON:0004572;2.99e-11;42!UBERON:0000947;1.05e-08;21!UBERON:0010191;1.05e-08;21!UBERON:0004237;9.02e-07;10!UBERON:0004695;9.02e-07;10!UBERON:0002111;9.02e-07;10!UBERON:0004178;9.02e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.13e-20,83;UBERON:0001009,9.08e-16,112;UBERON:0004535,1.88e-15,109;UBERON:0002049,5.01e-15,78;UBERON:0007798,5.01e-15,78;UBERON:0001637,2.18e-14,42;UBERON:0003509,2.18e-14,42;UBERON:0004572,2.18e-14,42;UBERON:0000055,5.91e-14,68;UBERON:0007500,6.34e-14,59;UBERON:0001981,6.34e-14,59;UBERON:0004537,6.34e-14,59;UBERON:0006965,6.34e-14,59;UBERON:0004573,1.86e-13,33;UBERON:0004571,1.86e-13,33;UBERON:0003914,3.20e-13,117;UBERON:0000948,7.68e-13,24;UBERON:0005498,7.68e-13,24;UBERON:0004140,7.68e-13,24;UBERON:0009881,7.68e-13,24;UBERON:0004141,7.68e-13,24;UBERON:0003084,7.68e-13,24;UBERON:0007005,7.68e-13,24;UBERON:0004139,7.68e-13,24;UBERON:0004291,7.68e-13,24;UBERON:0007100,1.04e-12,27;UBERON:0001134,4.13e-11,62;UBERON:0002036,4.13e-11,62;UBERON:0003082,4.13e-11,62;UBERON:0007503,8.94e-11,78;UBERON:0007524,1.78e-10,73;UBERON:0002385,2.18e-10,64;UBERON:0001015,2.18e-10,64;UBERON:0000383,2.18e-10,64;UBERON:0002329,2.97e-10,71;UBERON:0003059,2.97e-10,71;UBERON:0007282,2.97e-10,71;UBERON:0004290,2.97e-10,71;UBERON:0009618,2.97e-10,71;UBERON:0003077,6.15e-10,72;UBERON:0007285,6.15e-10,72;UBERON:0003104,4.78e-09,160;UBERON:0009142,4.78e-09,160;UBERON:0005256,5.10e-09,122;UBERON:0000947,1.02e-08,21;UBERON:0010191,1.02e-08,21;UBERON:0000486,1.77e-08,83;UBERON:0000926,4.15e-08,315;UBERON:0004120,4.15e-08,315;UBERON:0006603,4.15e-08,315;UBERON:0003103,2.59e-07,68;UBERON:0004237,7.03e-07,10;UBERON:0004695,7.03e-07,10;UBERON:0002111,7.03e-07,10;UBERON:0004178,7.03e-07,10 | |||
|phase1_expression=1.81678379270557,4.71021152560163,0.986680828671798,4.00293193412522,6.70441641640932,1.74467704820074,5.06599756336621,1.26343974685366,0,0,0,0,0,0.866364470720326,2.98257638155124,7.39557661096953,7.8350288643117,7.30310090387373,3.90346239032406,0.369363174230364,2.04000691244253,2.82109249330279,0,0,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.40648818027883,19.8791533811511,12.0321098552613,21.4372848062019,31.811437882044,55.9630100848031,0.0945348171640679,0.665188192387692,0.43917392846563,1.17881167947941,0,0,0,0,0,0,0,0,0.993812036833525,0,4.16568601929113,1.13061588384802,2.93649605346934,1.92582629358047,0.835979866147242,0.258416759169329,0,2.67776490211736,0,0,2.92874469057803,0.735326160691737,5.67099363517232,1.60739510911344,0,0.675668882899933,0,0.949265659568129,1.28241220751285,0,0,0,10.4364109856017,23.6799056812764,0.794455084879313,59.3751804950044,9.22137793715728,6.72813120170769,43.767088249179,21.7067442607101,0.933633106199299,3.90660949002095,2.12500474047496,20.7359675873556,16.13292588544,0.70296429550139,0,0.570471821544449,0.747243402759005,0.469737994575059,0,0,0,0.245668634623536,0.413303124703062,0,5.68713937340681,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0.438977620880838,1.22595118319608,2.25357088359895,2.26864366320042,7.17558542755448,4.91181994282705,6.99375273826554,6.00182192168805,4.53431128649131,5.41045134095821,5.58350568994769,7.42615861861571,9.84113752128106,7.06814567883521,4.05019554026117,11.8001621477733,12.7803453305981,3.72782763442269,4.0694542154517,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,3.12899064659632,6.43240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,14.0241773803446,0.8231480226628,1.47008711385542,0,0.982827216677626,10.6342183202653,0,0,1.02940686179115,0,0,0,0,0.325808305310325,0,0,0,0.939269553886573,5.05282567163758,6.94478268864916,8.56143685055692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.308482478109971,0,0,6.39147180768556,1.30788020649984,7.0404754388112,4.13669490424889,21.4593867511129,4.22651376278,2.12750493267896,2.08014873822732,0.771622122786426,1.41849132023278,0.266422179016099,0.57191197463259,3.25572963234866,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,11.501993063596,37.9044388252576,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,3.0672872929785,6.5022167737758,2.98391526069709,33.0673669833983,36.0426557370267,23.6553622550902,20.1483233787467,6.62081419400982,18.1926003244788,18.6251528326509,16.6056399633859,2.02806085395873,0.955719759148911,39.9434361223991,37.7457766191941,0,0,0,0,0,0,5.45837177201309,5.83155498494637,16.8396056659844,3.45975702990393,6.65219423786715,14.6377068240683,0,4.1636617326717,14.027376299737,1.97105174433142,2.07701771673448,3.02146983995894,1.69203229428271,0,0,0.229628896329213,3.09554985611419,1.44236856455367,0,0,0,0,0,0,0,2.37507507712353,33.9299955918637,1.08378575017541,1.50506932156456,0,0,0,0,0,0,0,1.30151357865721,3.60643540767028,0,0,0,0,1.6068392984416,7.15363315361703,1.3864375540318,2.30255512089194,1.51620229732984,1.28904293841928,2.75531718437034,1.78975917573812,17.0941508441736,0,0,0,0.10115778085555,5.57814659156743,26.4442371337738,0.6970372701606,4.62050370264133,3.72614221221915,2.60979897622522,6.11569923042936,0.572499546967965,2.97726695487734,1.89827654831236,0.190630193923825,0.255897791311334,1.71175595213568,0.95460974377781,18.0538187245823,0.359744915166629,0,0.235624804691373,4.24583211303964,14.2659289055707,1.26377536871694,0,4.38684281336312,3.16950440270266,1.36499911407986,1.1312434556297,3.39024349860728,1.65409603063837,9.28814565337708,9.20746859032902,0.578775534266688,1.31178950409327,0.608731130888112,2.16876448669825,5.07052084558035,0,0.687743287091848,0.7133421029625,2.12856638442359,9.28873595309722,13.501090611356,0,1.74967360122491,0,0.670302275535787,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0,0,0,0.422008249231538,0,0,1.26675244876796,31.2819341554179,0.552567831062295,0,0,0,7.77598969154519,0,0,0,1.67693789582787,0,0,0.969332746095218,0.834912883456661,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,2.77020930613669,0.341826167541004,0,0,0,0.957003479195758,2.65633020865401,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,3.21031058919516,0.702793337176017,0,0,0,1.18375320854817,2.41981432097328,0.61214552326098,6.00272506470636,0,0,0,0,0,0,0,0,0,0,0,2.4461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| ||
|short_description=p3@BGN | |short_description=p3@BGN | ||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p3@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 399bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.58e-13 | 76 |
muscle cell | 1.87e-12 | 55 |
muscle precursor cell | 3.41e-11 | 58 |
myoblast | 3.41e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-11 | 58 |
vascular associated smooth muscle cell | 1.59e-10 | 32 |
electrically responsive cell | 4.47e-10 | 61 |
electrically active cell | 4.47e-10 | 61 |
smooth muscle cell | 4.02e-09 | 43 |
smooth muscle myoblast | 4.02e-09 | 43 |
mesodermal cell | 1.33e-08 | 121 |
multi fate stem cell | 1.55e-08 | 427 |
cardiocyte | 2.97e-08 | 16 |
somatic stem cell | 6.29e-08 | 433 |
extracellular matrix secreting cell | 7.07e-08 | 15 |
preadipocyte | 7.95e-08 | 12 |
stem cell | 3.68e-07 | 441 |
aortic smooth muscle cell | 7.03e-07 | 10 |