FFCP PHASE1:Hg19::chrX:53449816..53449827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158787 | |EntrezGene=158787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26537 | |HGNC=26537 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDU2,Q8N443 | |UniProt=E9PDU2,Q8N443 | ||
|association_with_transcript=11bp_to_,-11bp_to_ENST00000414955,ENST00000457095,NM_144968,uc004dsj.1,uc004dsk.2,uc011mog.1_5end | |association_with_transcript=11bp_to_,-11bp_to_ENST00000414955,ENST00000457095,NM_144968,uc004dsj.1,uc004dsk.2,uc011mog.1_5end | ||
|cluster_id=chrX:53449816..53449827,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_RIBC1_5end | |description=CAGE_peak_3_at_RIBC1_5end | ||
|id=chrX:53449816..53449827,+ | |id=chrX:53449816..53449827,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.25e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.25e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.67e-17;2!UBERON:0009117;3.40e-13;10!UBERON:0005564;3.40e-13;10 | |||
|ontology_enrichment_disease=DOID:0050687!2.45e-08!143;DOID:305!3.48e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.25e-09;1!DOID:2152;3.25e-09;1!DOID:1357;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.25e-09,1;DOID:0050619,4.50e-09,1;DOID:1357,4.50e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-15!115;UBERON:0001049!1.08e-12!57;UBERON:0005068!1.08e-12!57;UBERON:0006241!1.08e-12!57;UBERON:0007135!1.08e-12!57;UBERON:0005743!2.25e-11!86;UBERON:0003075!4.71e-11!86;UBERON:0007284!4.71e-11!86;UBERON:0000073!5.31e-11!94;UBERON:0001016!5.31e-11!94;UBERON:0001017!6.01e-11!82;UBERON:0002346!9.53e-11!90;UBERON:0000955!3.35e-10!69;UBERON:0006238!3.35e-10!69;UBERON:0002616!5.78e-10!59;UBERON:0002780!6.72e-09!41;UBERON:0001890!6.72e-09!41;UBERON:0006240!6.72e-09!41;UBERON:0003080!1.61e-08!42;UBERON:0003056!9.74e-08!61;UBERON:0002298!6.94e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;4.67e-17;2!UBERON:0001896;4.47e-12;3!UBERON:0005290;4.47e-12;3!UBERON:0005383;1.09e-11;3!UBERON:0005382;1.09e-11;3!UBERON:0002336;3.25e-09;1!UBERON:0004911;3.25e-09;1!UBERON:0001764;3.25e-09;1!UBERON:0011215;3.25e-09;1!UBERON:0001018;3.25e-09;1!UBERON:0001825;3.25e-09;1!UBERON:0002473;3.25e-09;1!UBERON:0005340;3.25e-09;1!UBERON:0003544;3.25e-09;1!UBERON:0005970;3.25e-09;1!UBERON:0002316;3.25e-09;1!UBERON:0001020;3.25e-09;1!UBERON:0002437;3.25e-09;1!UBERON:0000369;5.51e-09;4!UBERON:0002435;5.51e-09;4!UBERON:0000204;5.51e-09;4!UBERON:0003296;8.20e-09;4!UBERON:0010133;8.20e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,4.68e-17,2;UBERON:0010122,4.68e-17,2;UBERON:0001896,5.13e-12,3;UBERON:0005290,5.13e-12,3;UBERON:0010096,5.13e-12,3;UBERON:0005383,1.10e-11,3;UBERON:0005382,1.10e-11,3;UBERON:0007023,1.21e-09,114;UBERON:0002336,1.99e-09,1;UBERON:0011215,1.99e-09,1;UBERON:0001018,1.99e-09,1;UBERON:0002473,1.99e-09,1;UBERON:0005340,1.99e-09,1;UBERON:0003544,1.99e-09,1;UBERON:0005970,1.99e-09,1;UBERON:0002316,1.99e-09,1;UBERON:0001020,1.99e-09,1;UBERON:0002437,1.99e-09,1;UBERON:0004911,3.25e-09,1;UBERON:0001764,4.50e-09,1;UBERON:0001825,4.50e-09,1;UBERON:0000369,5.51e-09,4;UBERON:0002435,5.51e-09,4;UBERON:0000204,5.51e-09,4;UBERON:0010082,5.51e-09,4;UBERON:0003296,5.97e-09,4;UBERON:0010133,5.97e-09,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,2.35762335895883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0.504867548488229,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0.530119073285941,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.485442086998054,0,0,0,0,0.614321404198464,0,0.562677665642051,0.111308705022906,0,1.05562704063997,0.597743964753209,0.276283915531148,0.503865495708552,0,0.369254416383208,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0.7812832832557,0,0,0,0.254253650292766,0,0.689486746482929,0.291604613383254,0,2.65722415744152,1.32656082487949,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,1.63232808159148,0,0,0,0,0,0,0,0,1.7524294574976,0,0.702793337176017,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,2.60339607502696,0,0,0.698906672968121,0,0,0,0,0,0.529536760149002,0.90392296312213,0,0,0.126621591911757,0.586654148204409,0,0.426905989478705,0,0.288180834308212,0,1.02956998717179,0,0.248505071130865,0.707082103850386,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,1.28767814440971,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0.415440338029185,0,0,0.182248669974074,0,0.551639951094387,0.786818822024972,0.105600336519406,0.179287339332845,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0.904980694530854,0.52893040697076,0,2.81926008926669,1.17466153824464,6.9169894243853,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,1.25643277000187,0,0.488105059607853,0.1251909307065,6.88091034828085,2.3295100822739,0.683060432355218,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0.943595651135378,0,0,0.425149840203366,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0,1.65462722368366,0.40341013740704,0,0,0.163771917510097,0.295712172434091,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0.535701835878287,1.3451348888753,0,1.82129753081038,0,0.230467975111559,0,0.203909198930495,0.197318320688547,0.118193840883968,0.222462803784138,0.078493092850514,0.471346769748006,0,0,0,0.9555033757741,0.357382720883282,0.316027223465453,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,1.34226518157351,0.196300467230486,0,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0.475680363110274,0,0.439762066981716,0.603851374266694,0,0,0.470317296361523,0,0.235676547101626,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.253397002022874,0.203977659483963,0.26721740526556,0.0918948995348449,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| ||
|short_description=p3@RIBC1 | |short_description=p3@RIBC1 | ||
}} | }} |
Latest revision as of 00:19, 16 September 2015
Short description: | p3@RIBC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RIBC1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 11bp_to_, -11bp_to_ENST00000414955, ENST00000457095, NM_144968, uc004dsj.1, uc004dsk.2, uc011mog.1_5end |
EntrezGene: | RIBC1 |
HGNC: | 26537 |
UniProt: | E9PDU2Q8N443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 4.68e-17 | 2 |
future caudate nucleus | 4.68e-17 | 2 |
medulla oblongata | 5.13e-12 | 3 |
myelencephalon | 5.13e-12 | 3 |
future myelencephalon | 5.13e-12 | 3 |
caudate-putamen | 1.10e-11 | 3 |
dorsal striatum | 1.10e-11 | 3 |
adult organism | 1.21e-09 | 114 |
corpus callosum | 1.99e-09 | 1 |
central nervous system cell part cluster | 1.99e-09 | 1 |
axon tract | 1.99e-09 | 1 |
intercerebral commissure | 1.99e-09 | 1 |
dorsal telencephalic commissure | 1.99e-09 | 1 |
brain white matter | 1.99e-09 | 1 |
brain commissure | 1.99e-09 | 1 |
white matter | 1.99e-09 | 1 |
nervous system commissure | 1.99e-09 | 1 |
cerebral hemisphere white matter | 1.99e-09 | 1 |
epithelium of female gonad | 3.25e-09 | 1 |
maxillary sinus | 4.50e-09 | 1 |
paranasal sinus | 4.50e-09 | 1 |
corpus striatum | 5.51e-09 | 4 |
striatum | 5.51e-09 | 4 |
ventral part of telencephalon | 5.51e-09 | 4 |
future corpus striatum | 5.51e-09 | 4 |
gland of diencephalon | 5.97e-09 | 4 |
neuroendocrine gland | 5.97e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.25e-09 | 1 |
paranasal sinus cancer | 4.50e-09 | 1 |
maxillary sinus cancer | 4.50e-09 | 1 |