FFCP PHASE1:Hg19::chr3:145879113..145879126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5352 | |EntrezGene=5352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9082 | |HGNC=9082 | ||
|TSSclassifier=strong | |||
|UniProt=O00469 | |UniProt=O00469 | ||
|association_with_transcript=155bp_to_NM_000935,NM_182943,uc003evr.1,uc003evs.1_5end | |association_with_transcript=155bp_to_NM_000935,NM_182943,uc003evr.1,uc003evs.1_5end | ||
|cluster_id=chr3:145879113..145879126,- | |||
|coexpression_cluster_id=C1512 | |||
|description=CAGE_peak_2_at_PLOD2_5end | |description=CAGE_peak_2_at_PLOD2_5end | ||
|id=chr3:145879113..145879126,- | |id=chr3:145879113..145879126,- | ||
|ontology_enrichment_celltype=CL:0000055!3.77e-23!180;CL:0000222!4.33e-19!119;CL:0000220!7.93e-19!246;CL:0002321!2.81e-18!248;CL:0000359!4.70e-17!32;CL:0000680!6.83e-15!57;CL:0000056!6.83e-15!57;CL:0000355!6.83e-15!57;CL:0000187!1.60e-13!54;CL:0000192!2.40e-13!42;CL:0000514!2.40e-13!42;CL:0000393!7.72e-12!60;CL:0000211!7.72e-12!60;CL:0000183!2.14e-11!59;CL:0000057!9.90e-10!75;CL:0000066!2.86e-07!254;CL:0002539!8.74e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.77e-23!180;CL:0000222!4.33e-19!119;CL:0000220!7.93e-19!246;CL:0002321!2.81e-18!248;CL:0000359!4.70e-17!32;CL:0000680!6.83e-15!57;CL:0000056!6.83e-15!57;CL:0000355!6.83e-15!57;CL:0000187!1.60e-13!54;CL:0000192!2.40e-13!42;CL:0000514!2.40e-13!42;CL:0000393!7.72e-12!60;CL:0000211!7.72e-12!60;CL:0000183!2.14e-11!59;CL:0000057!9.90e-10!75;CL:0000066!2.86e-07!254;CL:0002539!8.74e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.89e-16;32!CL:0000192;7.85e-10;43!CL:0000187;1.76e-07;55!CL:0000134;3.03e-07;55!CL:0002539;6.87e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.68e-18,121;CL:0000359,2.35e-17,32;CL:0002321,1.47e-15,250;CL:0000680,1.43e-14,58;CL:0000056,1.43e-14,58;CL:0000355,1.43e-14,58;CL:0000187,3.39e-13,55;CL:0000192,6.40e-13,43;CL:0000514,6.40e-13,43;CL:0000393,3.25e-11,61;CL:0000211,3.25e-11,61;CL:0000057,3.43e-10,76;CL:0002539,6.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.85e-10;43!CL:0000355;1.39e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.02e-07!14 | |ontology_enrichment_disease=DOID:2394!1.02e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.11e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.26e-22!84;UBERON:0002049!2.45e-21!79;UBERON:0007798!2.45e-21!79;UBERON:0001981!3.65e-21!60;UBERON:0007500!3.65e-21!60;UBERON:0004537!3.65e-21!60;UBERON:0006965!3.65e-21!60;UBERON:0000055!6.40e-21!69;UBERON:0001637!3.70e-20!42;UBERON:0003509!3.70e-20!42;UBERON:0004572!3.70e-20!42;UBERON:0000490!4.06e-19!138;UBERON:0003914!7.01e-18!118;UBERON:0004573!1.01e-16!33;UBERON:0004571!1.01e-16!33;UBERON:0000477!3.27e-15!286;UBERON:0000914!8.94e-15!83;UBERON:0002329!8.94e-15!83;UBERON:0003077!8.94e-15!83;UBERON:0003059!8.94e-15!83;UBERON:0007282!8.94e-15!83;UBERON:0009618!8.94e-15!83;UBERON:0007285!8.94e-15!83;UBERON:0004535!1.73e-14!110;UBERON:0001009!1.95e-14!113;UBERON:0000483!6.06e-14!309;UBERON:0000119!6.48e-14!312;UBERON:0000475!1.19e-13!365;UBERON:0000486!1.21e-13!82;UBERON:0002100!1.55e-13!216;UBERON:0005256!1.98e-13!143;UBERON:0001134!4.20e-13!61;UBERON:0002036!4.20e-13!61;UBERON:0003082!4.20e-13!61;UBERON:0004290!7.49e-13!70;UBERON:0002385!9.55e-13!63;UBERON:0001015!9.55e-13!63;UBERON:0000383!9.55e-13!63;UBERON:0004111!2.65e-12!241;UBERON:0000481!3.63e-12!347;UBERON:0000468!4.20e-12!659;UBERON:0003104!4.66e-11!238;UBERON:0009142!4.66e-11!238;UBERON:0000025!1.09e-10!194;UBERON:0000947!1.15e-09!21;UBERON:0010191!1.15e-09!21;UBERON:0000467!1.20e-09!625;UBERON:0000480!2.13e-09!626;UBERON:0001048!2.40e-07!168;UBERON:0004237!8.74e-07!10;UBERON:0004695!8.74e-07!10;UBERON:0002111!8.74e-07!10;UBERON:0004178!8.74e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.93e-15;33!UBERON:0004571;1.93e-15;33!UBERON:0001637;1.03e-14;42!UBERON:0003509;1.03e-14;42!UBERON:0004572;1.03e-14;42!UBERON:0007500;2.27e-11;56!UBERON:0001981;2.27e-11;56!UBERON:0004537;2.27e-11;56!UBERON:0000947;8.57e-10;21!UBERON:0010191;8.57e-10;21!UBERON:0000055;8.87e-10;65!UBERON:0002049;1.62e-08;75!UBERON:0007798;1.62e-08;75!UBERON:0004237;6.87e-07;10!UBERON:0004695;6.87e-07;10!UBERON:0002111;6.87e-07;10!UBERON:0004178;6.87e-07;10 | |||
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| ||
|short_description=p2@PLOD2 | |short_description=p2@PLOD2 | ||
}} | }} |
Latest revision as of 06:23, 25 September 2015
Short description: | p2@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLOD2_5end |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | 155bp_to_NM_000935, NM_182943, uc003evr.1, uc003evs.1_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | O00469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.68e-18 | 121 |
vascular associated smooth muscle cell | 2.35e-17 | 32 |
embryonic cell | 1.47e-15 | 250 |
muscle precursor cell | 1.43e-14 | 58 |
myoblast | 1.43e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-14 | 58 |
muscle cell | 3.39e-13 | 55 |
smooth muscle cell | 6.40e-13 | 43 |
smooth muscle myoblast | 6.40e-13 | 43 |
electrically responsive cell | 3.25e-11 | 61 |
electrically active cell | 3.25e-11 | 61 |
fibroblast | 3.43e-10 | 76 |
aortic smooth muscle cell | 6.91e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.11e-08 | 14 |