FFCP PHASE1:Hg19::chr3:189654013..189654016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:189654013..189654016,- | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr3:189654013..189654016,- | |description=CAGE_peak_at_chr3:189654013..189654016,- | ||
|id=chr3:189654013..189654016,- | |id=chr3:189654013..189654016,- | ||
|ontology_enrichment_celltype=CL:0002621!4.21e-25!3;CL:0002076!9.51e-25!43;CL:0002368!9.52e-22!13;CL:0000223!1.31e-20!59;CL:0000317!1.16e-17!2;CL:1000448!1.16e-17!2;CL:0002308!1.16e-17!2;CL:0002140!1.16e-17!2;CL:0002159!6.23e-16!13;CL:0000622!2.48e-15!5;CL:0000066!1.79e-14!254;CL:0000154!7.20e-13!6;CL:0002166!4.12e-12!3;CL:0002328!1.16e-11!3;CL:0002231!1.29e-11!3;CL:0000362!5.64e-10!8;CL:0000220!1.61e-09!246;CL:0002321!2.05e-09!248;CL:0000150!9.55e-09!9;CL:0002202!1.34e-08!9;CL:0002632!1.34e-08!9;CL:0002077!1.59e-08!33 | |ontology_enrichment_celltype=CL:0002621!4.21e-25!3;CL:0002076!9.51e-25!43;CL:0002368!9.52e-22!13;CL:0000223!1.31e-20!59;CL:0000317!1.16e-17!2;CL:1000448!1.16e-17!2;CL:0002308!1.16e-17!2;CL:0002140!1.16e-17!2;CL:0002159!6.23e-16!13;CL:0000622!2.48e-15!5;CL:0000066!1.79e-14!254;CL:0000154!7.20e-13!6;CL:0002166!4.12e-12!3;CL:0002328!1.16e-11!3;CL:0002231!1.29e-11!3;CL:0000362!5.64e-10!8;CL:0000220!1.61e-09!246;CL:0002321!2.05e-09!248;CL:0000150!9.55e-09!9;CL:0002202!1.34e-08!9;CL:0002632!1.34e-08!9;CL:0002077!1.59e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.64e-40;2!CL:1000448;1.64e-40;2!CL:0002308;1.64e-40;2!CL:0002140;1.64e-40;2!CL:0002159;1.51e-35;14!CL:0002166;2.08e-27;3!CL:0002621;4.06e-27;3!CL:0000362;1.37e-20;9!CL:0000622;6.93e-17;5!CL:0000154;3.04e-14;6!CL:0002077;5.28e-14;34!CL:0000150;8.09e-10;9!CL:0002231;7.02e-08;3!CL:0002076;1.43e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.34e-40,2;CL:1000448,1.34e-40,2;CL:0002308,1.34e-40,2;CL:0002140,1.34e-40,2;CL:0002159,1.18e-35,14;CL:0002166,1.59e-27,3;CL:0002621,4.65e-27,3;CL:0000362,1.24e-20,9;CL:0000622,6.40e-17,5;CL:0002077,7.82e-15,34;CL:0000154,2.85e-14,6;CL:0000150,7.74e-10,9;CL:0002231,6.78e-08,3;CL:0002076,6.97e-08,42;CL:0000066,2.35e-07,253;CL:0000221,7.33e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.21e-25!3;UBERON:0002419!1.16e-17!2;UBERON:0007771!1.16e-17!2;UBERON:0003297!1.16e-17!2;UBERON:0001821!1.16e-17!2;UBERON:0003487!1.16e-17!2;UBERON:0001820!1.16e-17!2;UBERON:0005089!1.16e-17!2;UBERON:0005088!1.16e-17!2;UBERON:0004815!1.16e-11!3;UBERON:0002031!1.16e-11!3;UBERON:0001828!9.11e-10!8;UBERON:0001004!1.45e-09!72;UBERON:0001708!2.66e-09!4;UBERON:0001704!2.66e-09!4;UBERON:0004119!4.36e-09!169;UBERON:0000925!4.36e-09!169;UBERON:0006595!4.36e-09!169;UBERON:0002185!5.74e-09!4;UBERON:0000161!8.06e-08!35;UBERON:0004807!4.39e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.64e-40;2!UBERON:0007771;1.64e-40;2!UBERON:0003297;1.64e-40;2!UBERON:0001821;1.64e-40;2!UBERON:0003487;1.64e-40;2!UBERON:0001820;1.64e-40;2!UBERON:0001949;4.06e-27;3!UBERON:0001708;7.73e-21;4!UBERON:0008895;7.73e-21;4!UBERON:0011159;6.93e-17;5!UBERON:0010371;4.27e-16;31!UBERON:0001003;1.22e-12;15!UBERON:0007376;1.22e-12;15!UBERON:0003929;3.15e-12;7!UBERON:0003350;8.06e-11;8!UBERON:0001828;8.06e-11;8!UBERON:0011137;3.37e-08;11!UBERON:0010323;3.37e-08;11!UBERON:0000486;1.62e-07;12!UBERON:0003729;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.34e-40,2;UBERON:0007771,1.34e-40,2;UBERON:0003297,1.34e-40,2;UBERON:0001821,1.34e-40,2;UBERON:0003487,1.34e-40,2;UBERON:0001820,1.34e-40,2;UBERON:0005089,1.34e-40,2;UBERON:0005088,1.34e-40,2;UBERON:0001949,4.65e-27,3;UBERON:0001708,6.33e-21,4;UBERON:0008895,6.33e-21,4;UBERON:0011159,5.91e-17,5;UBERON:0010188,2.66e-14,6;UBERON:0002539,2.66e-14,6;UBERON:0008816,2.66e-14,6;UBERON:0001003,1.15e-12,15;UBERON:0007376,1.15e-12,15;UBERON:0007383,1.15e-12,15;UBERON:0003102,1.69e-12,99;UBERON:0003350,8.47e-11,8;UBERON:0001828,8.47e-11,8;UBERON:0010323,3.14e-08,11;UBERON:0003729,5.42e-07,13 | |||
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|short_description=p@chr3:189654013..189654016,- | |short_description=p@chr3:189654013..189654016,- | ||
}} | }} |
Latest revision as of 19:24, 29 July 2015
Short description: | p@chr3:189654013..189654016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:189654013..189654016, - |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.34e-40 | 2 |
epithelial cell of sweat gland | 1.34e-40 | 2 |
epithelial cell of skin gland | 1.34e-40 | 2 |
acinar cell of sebaceous gland | 1.34e-40 | 2 |
general ecto-epithelial cell | 1.18e-35 | 14 |
epithelial cell of Malassez | 1.59e-27 | 3 |
gingival epithelial cell | 4.65e-27 | 3 |
epidermal cell | 1.24e-20 | 9 |
acinar cell | 6.40e-17 | 5 |
ecto-epithelial cell | 7.82e-15 | 34 |
protein secreting cell | 2.85e-14 | 6 |
glandular epithelial cell | 7.74e-10 | 9 |
epithelial cell of prostate | 6.78e-08 | 3 |
endo-epithelial cell | 6.97e-08 | 42 |
epithelial cell | 2.35e-07 | 253 |
ectodermal cell | 7.33e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.34e-40 | 2 |
epidermis gland | 1.34e-40 | 2 |
gland of integumental system | 1.34e-40 | 2 |
sebaceous gland | 1.34e-40 | 2 |
skin sebaceous gland | 1.34e-40 | 2 |
sweat gland | 1.34e-40 | 2 |
sweat gland placode | 1.34e-40 | 2 |
sebaceous gland placode | 1.34e-40 | 2 |
gingival epithelium | 4.65e-27 | 3 |
jaw skeleton | 6.33e-21 | 4 |
splanchnocranium | 6.33e-21 | 4 |
primary subdivision of cranial skeletal system | 5.91e-17 | 5 |
protuberance | 2.66e-14 | 6 |
pharyngeal arch | 2.66e-14 | 6 |
embryonic head | 2.66e-14 | 6 |
skin epidermis | 1.15e-12 | 15 |
outer epithelium | 1.15e-12 | 15 |
enveloping layer of ectoderm | 1.15e-12 | 15 |
surface structure | 1.69e-12 | 99 |
epithelium of mucosa | 8.47e-11 | 8 |
gingiva | 8.47e-11 | 8 |
cranial skeletal system | 3.14e-08 | 11 |
mouth mucosa | 5.42e-07 | 13 |