FFCP PHASE1:Hg19::chr4:1166363..1166378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=254bp_to_ENST00000512888_5end | |association_with_transcript=254bp_to_ENST00000512888_5end | ||
|cluster_id=chr4:1166363..1166378,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_1_at_SPON2_5end | |description=CAGE_peak_1_at_SPON2_5end | ||
|id=chr4:1166363..1166378,- | |id=chr4:1166363..1166378,- | ||
|ontology_enrichment_celltype=CL:0000057!1.94e-16!75;CL:0000055!2.86e-15!180;CL:0000048!5.77e-13!430;CL:0000723!5.70e-12!436;CL:0000034!7.32e-12!444;CL:0002320!1.24e-09!365;CL:0000134!2.63e-08!358;CL:0000136!6.64e-08!15;CL:0002334!9.32e-08!12;CL:0000219!4.62e-07!390 | |ontology_enrichment_celltype=CL:0000057!1.94e-16!75;CL:0000055!2.86e-15!180;CL:0000048!5.77e-13!430;CL:0000723!5.70e-12!436;CL:0000034!7.32e-12!444;CL:0002320!1.24e-09!365;CL:0000134!2.63e-08!358;CL:0000136!6.64e-08!15;CL:0002334!9.32e-08!12;CL:0000219!4.62e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.97e-11;55!CL:0000723;2.72e-10;61!CL:0000048;4.68e-10;58!CL:0000034;2.68e-08;69!CL:0002334;2.68e-08;12!CL:0000057;1.45e-07;73!CL:0000136;2.20e-07;13!CL:0002320;4.20e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.39e-18,76;CL:0000048,5.75e-16,427;CL:0000723,5.72e-15,433;CL:0000034,4.60e-14,441;CL:0002320,4.73e-12,361;CL:0000134,1.76e-10,354;CL:0000219,9.86e-09,386;CL:0000136,1.85e-08,15;CL:0002334,2.67e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.15e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.13e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.24e-10!83;UBERON:0002329!3.24e-10!83;UBERON:0003077!3.24e-10!83;UBERON:0003059!3.24e-10!83;UBERON:0007282!3.24e-10!83;UBERON:0009618!3.24e-10!83;UBERON:0007285!3.24e-10!83;UBERON:0005256!1.08e-09!143;UBERON:0002384!7.03e-09!375;UBERON:0000479!8.05e-09!787;UBERON:0004290!1.07e-08!70;UBERON:0001013!1.81e-08!14;UBERON:0000468!1.12e-07!659;UBERON:0003102!1.43e-07!95;UBERON:0000486!5.57e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!3.24e-10!83;UBERON:0002329!3.24e-10!83;UBERON:0003077!3.24e-10!83;UBERON:0003059!3.24e-10!83;UBERON:0007282!3.24e-10!83;UBERON:0009618!3.24e-10!83;UBERON:0007285!3.24e-10!83;UBERON:0005256!1.08e-09!143;UBERON:0002384!7.03e-09!375;UBERON:0000479!8.05e-09!787;UBERON:0004290!1.07e-08!70;UBERON:0001013!1.81e-08!14;UBERON:0000468!1.12e-07!659;UBERON:0003102!1.43e-07!95;UBERON:0000486!5.57e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.51e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.34e-11,371;UBERON:0005256,3.15e-10,122;UBERON:0000479,4.10e-10,773;UBERON:0003104,8.16e-10,160;UBERON:0009142,8.16e-10,160;UBERON:0002329,2.85e-09,71;UBERON:0003059,2.85e-09,71;UBERON:0007282,2.85e-09,71;UBERON:0004290,2.85e-09,71;UBERON:0009618,2.85e-09,71;UBERON:0001013,4.51e-09,14;UBERON:0000926,5.70e-09,315;UBERON:0004120,5.70e-09,315;UBERON:0006603,5.70e-09,315;UBERON:0007503,6.17e-09,78;UBERON:0007524,6.43e-09,73;UBERON:0003077,7.06e-09,72;UBERON:0007285,7.06e-09,72;UBERON:0003102,2.57e-08,99;UBERON:0004923,5.45e-08,66;UBERON:0002199,1.10e-07,46;UBERON:0002416,1.10e-07,46;UBERON:0000486,4.68e-07,83;UBERON:0002385,8.59e-07,64;UBERON:0001015,8.59e-07,64;UBERON:0000383,8.59e-07,64 | |||
|phase1_expression=694.011408813526,331.855812031024,639.792040191613,528.387015304529,1045.44199986543,77.6381286449328,818.158606483643,248.897630130171,196.933963662678,18.6757791741147,9.76921635161399,0.218441372130172,31.9158043656429,98.7655496621172,119.30305526205,5.3786011716142,2.41077811209591,1.46062018077475,1.95173119516203,0.984968464614303,3.06001036866379,1.56727360739044,2.0036519099174,0.958120975510189,2.88748071068046,0,0,0,20.0615781192941,13.4340289334024,19.1971992911934,0,0.30120591877825,0,0,0,0,12.1878989877013,9.82667792603694,16.7098370451206,0.223915474239924,0.971680998056939,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,1.43846196161075,0.256160706529101,0,0,2.5819387343353,0,0.564727018627814,1.09162460023138,0.449446968890169,0.918251677112708,0.962787081228281,0,0.989553900560148,0.199463657621632,0,1.45104619314292,0.56738522469114,1.86846674698672,4.52247597462138,3.12889751052121,0.868755378820466,4.84319602106695,0.368277635987565,1.26584954976354,0.211255286311942,0,0.628975936525128,0,0,0.48217676009124,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.17447437874188,1.14681968437569,1.32171328579026,9.52864557068611,0.263384084775077,0,1.96505381374582,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,1.03088233644789,0.759059076058509,4.45991580053735,7.1619179924206,4.75226022224187,11.7448592880663,9.85496905889022,4.99722906209383,7.81364931745256,9.85353596305256,10.6851573909108,25.1393784036497,5.21367853978076,165.788669093494,144.871385695985,30.9427399661343,1.80719576192283,6.01605492763067,7.9665585428453,2.3858578411533,7.78615792484217,1.22895262313288,2.88248216701333,0.527008714158756,16.1104262862187,0.364295288292542,1.48313777113772,10.7100639906045,9.5771355514597,32.7076582876408,25.9954780492823,8.57992366170192,10.4008100372278,0,10.3228151412735,0,0,0.419499436209906,0,0,0,6.75955899104749,1.33888245105868,0,0,1.70843440283719,0,0,0,0,0,0,0,0.366403487860815,0,3.87780264148325,0.872188104285069,0.993943903390637,0.379891534993739,3.04541115870403,50.77008187254,18.0880874921162,4.48542080113846,0,1.48000529050296,114.836872062514,8.89090435659941,40.5385519721378,35.5689954965589,84.1216849740798,10.7787858643546,599.971667667876,34.7987811142114,164.841894648637,26.3053276962033,39.6588713701922,45.0847089514218,20.6195712967442,24.4440291450418,34.5108109127057,185.328445736,158.992635526112,276.68905402916,1693.06434211906,15.6552585977282,8.88341491090946,15.5155904671142,15.8031943517102,32.1812185588971,60.8464138571717,12.8178366970824,18.6565221116416,15.1625746061183,15.471028784648,158.14800763648,50.4957393268351,26.5369756246998,26.2424767427542,3.20675031258406,2.43592512902997,10.0973509697646,8.83679026966074,42.997851113804,29.465796178879,8.96693674225998,12.7170444232866,3.47869535693934,1.09098448236334,2.00763216772303,0.365921118388786,0.530119073285941,0.929551542956147,1.34759371519982,0.756962552626885,0.36497735907583,28.1609158193669,133.79411514412,52.4912701139426,165.314982379385,891.521159861938,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,1.4763109092493,150.058697969687,269.580977422067,757.094863635541,36.7589600983309,42.2615703171379,132.927729003316,0,0,9.43622956641891,5.48751427043128,0,0,0.185176890317059,34.2098720575841,180.948652638647,0,2.55046890945169,0.587043471179108,1.58803092537181,0,0,0,0,2.70838706696137,45.8648359672906,54.3990053976745,2.81201501960331,1.6798212819886,0.141775097242386,0,0,4.60059214998253,0,0,0.414656231081544,0.432359860250884,0.25248486685276,10.2866588753314,70.2858703027231,24.6156639141099,59.8753561079468,8.43185440167253,64.8741004942862,3.71574362419752,15.5862207240051,28.3374044741632,9.5339771567235,953.508175429369,1065.81620863861,131.02192664618,797.548411638027,556.439787475809,4.11531798819427,9.92943924162948,14.3867976668694,209.319782715528,2007.15731834295,457.721627250107,84.6914079163711,215.722912886725,273.223396162033,3.61727252471503,5.22920075160176,0.799783929456456,40.1358476115929,1.00451418286425,14.7583757638122,4.31324739884849,2.29723871668228,0,40.5387658669222,9.45191083731764,4.1184021545176,0,48.666597769876,51.7506179662842,76.1074205138908,21.0898538104645,2.60279707715243,0,2.34522771468088,3.18969375826582,0,0,0.414415513436035,36.0712985654271,27.0092081372226,10.8506009479894,28.6999788912514,1.60586089917446,7.7274183366628,0.468565659970853,1.50473049863859,22.7407504055985,25.8682678231262,0.664225598535437,3.50301420229236,115.381440013614,51.6915055701635,10.9805895619474,10.958705384513,24.1599904916851,28.1760752601093,1.81876542867756,18.3078983461547,6.65258645325297,298.721800613807,71.0528936323729,157.450312976954,409.788999319732,244.596065053884,453.768911546117,60.8514072424463,117.507786677624,109.733146243513,100.68789327293,167.71918062631,135.501301284312,0,0.20050647030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|phase1_expression=694.011408813526,331.855812031024,639.792040191613,528.387015304529,1045.44199986543,77.6381286449328,818.158606483643,248.897630130171,196.933963662678,18.6757791741147,9.76921635161399,0.218441372130172,31.9158043656429,98.7655496621172,119.30305526205,5.3786011716142,2.41077811209591,1.46062018077475,1.95173119516203,0.984968464614303,3.06001036866379,1.56727360739044,2.0036519099174,0.958120975510189,2.88748071068046,0,0,0,20.0615781192941,13.4340289334024,19.1971992911934,0,0.30120591877825,0,0,0,0,12.1878989877013,9.82667792603694,16.7098370451206,0.223915474239924,0.971680998056939,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,1.43846196161075,0.256160706529101,0,0,2.5819387343353,0,0.564727018627814,1.09162460023138,0.449446968890169,0.918251677112708,0.962787081228281,0,0.989553900560148,0.199463657621632,0,1.45104619314292,0.56738522469114,1.86846674698672,4.52247597462138,3.12889751052121,0.868755378820466,4.84319602106695,0.368277635987565,1.26584954976354,0.211255286311942,0,0.628975936525128,0,0,0.48217676009124,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.17447437874188,1.14681968437569,1.32171328579026,9.52864557068611,0.263384084775077,0,1.96505381374582,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,1.03088233644789,0.759059076058509,4.45991580053735,7.1619179924206,4.75226022224187,11.7448592880663,9.85496905889022,4.99722906209383,7.81364931745256,9.85353596305256,10.6851573909108,25.1393784036497,5.21367853978076,165.788669093494,144.871385695985,30.9427399661343,1.80719576192283,6.01605492763067,7.9665585428453,2.3858578411533,7.78615792484217,1.22895262313288,2.88248216701333,0.527008714158756,16.1104262862187,0.364295288292542,1.48313777113772,10.7100639906045,9.5771355514597,32.7076582876408,25.9954780492823,8.57992366170192,10.4008100372278,0,10.3228151412735,0,0,0.419499436209906,0,0,0,6.75955899104749,1.33888245105868,0,0,1.70843440283719,0,0,0,0,0,0,0,0.366403487860815,0,3.87780264148325,0.872188104285069,0.993943903390637,0.379891534993739,3.04541115870403,50.77008187254,18.0880874921162,4.48542080113846,0,1.48000529050296,114.836872062514,8.89090435659941,40.5385519721378,35.5689954965589,84.1216849740798,10.7787858643546,599.971667667876,34.7987811142114,164.841894648637,26.3053276962033,39.6588713701922,45.0847089514218,20.6195712967442,24.4440291450418,34.5108109127057,185.328445736,158.992635526112,276.68905402916,1693.06434211906,15.6552585977282,8.88341491090946,15.5155904671142,15.8031943517102,32.1812185588971,60.8464138571717,12.8178366970824,18.6565221116416,15.1625746061183,15.471028784648,158.14800763648,50.4957393268351,26.5369756246998,26.2424767427542,3.20675031258406,2.43592512902997,10.0973509697646,8.83679026966074,42.997851113804,29.465796178879,8.96693674225998,12.7170444232866,3.47869535693934,1.09098448236334,2.00763216772303,0.365921118388786,0.530119073285941,0.929551542956147,1.34759371519982,0.756962552626885,0.36497735907583,28.1609158193669,133.79411514412,52.4912701139426,165.314982379385,891.521159861938,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,1.4763109092493,150.058697969687,269.580977422067,757.094863635541,36.7589600983309,42.2615703171379,132.927729003316,0,0,9.43622956641891,5.48751427043128,0,0,0.185176890317059,34.2098720575841,180.948652638647,0,2.55046890945169,0.587043471179108,1.58803092537181,0,0,0,0,2.70838706696137,45.8648359672906,54.3990053976745,2.81201501960331,1.6798212819886,0.141775097242386,0,0,4.60059214998253,0,0,0.414656231081544,0.432359860250884,0.25248486685276,10.2866588753314,70.2858703027231,24.6156639141099,59.8753561079468,8.43185440167253,64.8741004942862,3.71574362419752,15.5862207240051,28.3374044741632,9.5339771567235,953.508175429369,1065.81620863861,131.02192664618,797.548411638027,556.439787475809,4.11531798819427,9.92943924162948,14.3867976668694,209.319782715528,2007.15731834295,457.721627250107,84.6914079163711,215.722912886725,273.223396162033,3.61727252471503,5.22920075160176,0.799783929456456,40.1358476115929,1.00451418286425,14.7583757638122,4.31324739884849,2.29723871668228,0,40.5387658669222,9.45191083731764,4.1184021545176,0,48.666597769876,51.7506179662842,76.1074205138908,21.0898538104645,2.60279707715243,0,2.34522771468088,3.18969375826582,0,0,0.414415513436035,36.0712985654271,27.0092081372226,10.8506009479894,28.6999788912514,1.60586089917446,7.7274183366628,0.468565659970853,1.50473049863859,22.7407504055985,25.8682678231262,0.664225598535437,3.50301420229236,115.381440013614,51.6915055701635,10.9805895619474,10.958705384513,24.1599904916851,28.1760752601093,1.81876542867756,18.3078983461547,6.65258645325297,298.721800613807,71.0528936323729,157.450312976954,409.788999319732,244.596065053884,453.768911546117,60.8514072424463,117.507786677624,109.733146243513,100.68789327293,167.71918062631,135.501301284312,0,0.20050647030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| ||
|short_description=p1@SPON2 | |short_description=p1@SPON2 | ||
}} | }} |
Latest revision as of 20:29, 24 September 2015
Short description: | p1@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 254bp_to_ENST00000512888_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.39e-18 | 76 |
multi fate stem cell | 5.75e-16 | 427 |
somatic stem cell | 5.72e-15 | 433 |
stem cell | 4.60e-14 | 441 |
connective tissue cell | 4.73e-12 | 361 |
mesenchymal cell | 1.76e-10 | 354 |
motile cell | 9.86e-09 | 386 |
fat cell | 1.85e-08 | 15 |
preadipocyte | 2.67e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.34e-11 | 371 |
trunk mesenchyme | 3.15e-10 | 122 |
tissue | 4.10e-10 | 773 |
mesenchyme | 8.16e-10 | 160 |
entire embryonic mesenchyme | 8.16e-10 | 160 |
somite | 2.85e-09 | 71 |
presomitic mesoderm | 2.85e-09 | 71 |
presumptive segmental plate | 2.85e-09 | 71 |
dermomyotome | 2.85e-09 | 71 |
trunk paraxial mesoderm | 2.85e-09 | 71 |
adipose tissue | 4.51e-09 | 14 |
mesoderm | 5.70e-09 | 315 |
mesoderm-derived structure | 5.70e-09 | 315 |
presumptive mesoderm | 5.70e-09 | 315 |
epithelial vesicle | 6.17e-09 | 78 |
dense mesenchyme tissue | 6.43e-09 | 73 |
paraxial mesoderm | 7.06e-09 | 72 |
presumptive paraxial mesoderm | 7.06e-09 | 72 |
surface structure | 2.57e-08 | 99 |
organ component layer | 5.45e-08 | 66 |
integument | 1.10e-07 | 46 |
integumental system | 1.10e-07 | 46 |
multilaminar epithelium | 4.68e-07 | 83 |
muscle tissue | 8.59e-07 | 64 |
musculature | 8.59e-07 | 64 |
musculature of body | 8.59e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.13e-07 | 14 |