FFCP PHASE1:Hg19::chr15:39882160..39882178,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39882160..39882178,+
|short_description=p@chr15:39882160..39882178,+
|description=CAGE_peak_at_chr15:39882160..39882178,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39882160..39882178,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39882160..39882178,+ | |||
|id=chr15:39882160..39882178,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.81e-15!591;CL:0000057!2.27e-14!75;CL:0000055!4.86e-13!180;CL:0000115!2.10e-12!35;CL:0000144!3.33e-12!625;CL:0002139!4.04e-12!24;CL:0000222!9.85e-11!119;CL:0002078!6.11e-10!44;CL:0000220!7.81e-10!246;CL:0002321!1.75e-09!248;CL:0000548!3.84e-09!679;CL:0000004!3.84e-09!679;CL:0000255!3.84e-09!679;CL:0000012!9.65e-09!682;CL:0000071!1.86e-08!18;CL:0002546!1.86e-08!18;CL:0002334!2.16e-08!12;CL:0000213!1.31e-07!57;CL:0000215!1.31e-07!57;CL:0002620!1.81e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.48e-17;24!CL:0000115;3.06e-15;36!CL:0002078;1.17e-10;45!CL:0000071;1.37e-10;18!CL:0002334;1.98e-10;12!CL:0002138;1.71e-08;6!CL:0002620;1.10e-07;23!CL:0000057;6.60e-07;73!CL:0000213;6.77e-07;58!CL:0000215;6.77e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-19,76;CL:0000115,6.13e-18,36;CL:0002139,6.61e-17,24;CL:0002078,2.39e-15,45;CL:0000213,4.18e-11,58;CL:0000215,4.18e-11,58;CL:0002334,1.17e-10,12;CL:0000071,1.31e-10,18;CL:0002546,1.31e-10,18;CL:0000222,3.84e-09,121;CL:0005020,1.89e-08,6;CL:0002138,1.89e-08,6;CL:0005022,1.89e-08,6;CL:0002620,1.02e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002546;1.37e-10;18!CL:0005022;1.71e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.65e-07;5!DOID:450;2.65e-07;5!DOID:66;2.65e-07;5!DOID:423;2.65e-07;5!DOID:0080000;2.65e-07;5!DOID:11722;2.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.29e-07,5;DOID:450,1.29e-07,5;DOID:66,1.29e-07,5;DOID:423,1.29e-07,5;DOID:0080000,1.29e-07,5;DOID:11722,1.29e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.32e-17!84;UBERON:0000055!7.52e-16!69;UBERON:0002049!3.27e-14!79;UBERON:0007798!3.27e-14!79;UBERON:0001981!3.35e-14!60;UBERON:0007500!3.35e-14!60;UBERON:0004537!3.35e-14!60;UBERON:0006965!3.35e-14!60;UBERON:0004535!8.83e-13!110;UBERON:0001009!2.51e-12!113;UBERON:0003914!2.81e-11!118;UBERON:0000468!1.30e-09!659;UBERON:0001637!2.07e-09!42;UBERON:0003509!2.07e-09!42;UBERON:0004572!2.07e-09!42;UBERON:0000490!5.15e-09!138;UBERON:0003102!8.05e-09!95;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.86e-08!626;UBERON:0001986!1.86e-08!18;UBERON:0004638!1.86e-08!18;UBERON:0004852!1.86e-08!18;UBERON:0002097!1.39e-07!40;UBERON:0000487!1.58e-07!22;UBERON:0006914!1.85e-07!25;UBERON:0002199!3.47e-07!45;UBERON:0002416!3.47e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.37e-10;18!UBERON:0001986;1.37e-10;18!UBERON:0004852;1.37e-10;18!UBERON:0000487;2.43e-09;22!UBERON:0000055;2.94e-09;65!UBERON:0006914;5.62e-09;25!UBERON:0003688;1.52e-08;6!UBERON:0002358;1.52e-08;6!UBERON:0003684;1.52e-08;6!UBERON:0001178;1.52e-08;6!UBERON:0001637;1.65e-08;42!UBERON:0003509;1.65e-08;42!UBERON:0004572;1.65e-08;42!UBERON:0002097;2.37e-08;41!UBERON:0007500;5.16e-08;56!UBERON:0001981;5.16e-08;56!UBERON:0004537;5.16e-08;56!UBERON:0002199;5.02e-07;46!UBERON:0002416;5.02e-07;46!UBERON:0004457;5.30e-07;9!UBERON:0000042;5.30e-07;9!UBERON:0000947;7.21e-07;21!UBERON:0010191;7.21e-07;21!UBERON:0002049;7.96e-07;75!UBERON:0007798;7.96e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.77e-17,68;UBERON:0004872,8.00e-15,83;UBERON:0002049,2.51e-14,78;UBERON:0007798,2.51e-14,78;UBERON:0004535,1.83e-13,109;UBERON:0007500,2.99e-13,59;UBERON:0001981,2.99e-13,59;UBERON:0004537,2.99e-13,59;UBERON:0006965,2.99e-13,59;UBERON:0001009,9.15e-13,112;UBERON:0003914,7.56e-11,117;UBERON:0004638,1.31e-10,18;UBERON:0001986,1.31e-10,18;UBERON:0004852,1.31e-10,18;UBERON:0002199,2.70e-10,46;UBERON:0002416,2.70e-10,46;UBERON:0002097,4.80e-10,41;UBERON:0001637,9.60e-10,42;UBERON:0003509,9.60e-10,42;UBERON:0004572,9.60e-10,42;UBERON:0000487,2.17e-09,22;UBERON:0006914,5.57e-09,25;UBERON:0003688,1.28e-08,6;UBERON:0002358,1.28e-08,6;UBERON:0003684,1.28e-08,6;UBERON:0001178,1.28e-08,6;UBERON:0003102,6.67e-07,99;UBERON:0000947,7.80e-07,21;UBERON:0010191,7.80e-07,21 | |||
|phase1_expression=3.45188920614058,7.70761886007539,1.69145284915165,7.00513088471913,3.12872766099101,16.574431957907,0,0,0,0.245733936501509,1.39560233594486,1.31064823278103,1.58260186937072,0.866364470720326,0.331397375727916,4.70627602516243,6.62963980826375,5.11217063271161,5.36726078669558,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0,0,0,0,0,3.40925560699241,0.217010870715852,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0,0.697287110717054,0,0,2.01384674625505,0,0,2.41321976515633,0,0,0.941211697713023,0,0,1.83650335422542,0.641858054152187,0,0,0.199463657621632,0,3.77272010217159,0.56738522469114,0,1.00499466102697,0,0,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.66221330396589,0.722878304769133,1.00267582127178,1.15877215168659,0,3.89307896242109,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,3.47140501607594,0.56530794192401,3.77549492588915,2.75118041940067,1.46296476575767,1.8089173141853,1.06729878806013,1.33888245105868,3.62546385398232,3.80136052859256,2.68468263302986,6.98559852657151,4.86085168729056,3.03619076165871,0.673588117878509,1.0135033243499,1.53316637465883,0,1.64881569537367,0,0,0.436094052142534,7.9515512271251,5.82500353657067,1.19168262731897,3.72887606973458,0.354668382198357,3.92474320099615,3.20246987189115,7.4000264525148,0,0.67355336034844,1.79808093424805,0,1.72852777344,0,0,0,0.597794722207204,0,0.323745888736263,0.140450806702248,0,0.491337269247072,0.413303124703062,0,7.17074094907815,0,0,0,0.250237039743928,0.277064115484183,1.31693286264251,7.35570709917647,1.95309476578576,3.85669422744072,15.9656775763087,1.92201649936711,3.17897851739343,3.60109315301283,1.95799805553034,7.72921620136887,3.16398655763703,1.35021065793013,1.07180705677318,3.78650661366172,3.31379635112278,0.969876340912871,5.68015348026583,0.705264687593482,1.3564847384839,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,6.43240938192885,4.14404764057442,8.8229906326076,5.77503585335668,0.354920400119532,0,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,1.86575485194663,0,0.603173834469785,1.94435734832912,0,0,0,0,0.234817388471643,4.90845922387651,9.25971025153221,10.6542325251375,0,0,0,0,0,0,1.51183915378974,1.13420077793909,1.16426079513703,0.871901815541886,1.91691339582606,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,2.08014873822732,0,0,0,0.714889968290738,0.542621605391443,0,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,0,0,0,1.67737398844108,0,0,0.723906533337896,0.61642896765115,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.49076596687656,0,0.542530047399471,10.1905722150095,32.2956469722863,10.0929545621718,5.73992933464295,0.902838299183157,0,0,0.664225598535437,0.368738337083406,5.03924963914881,0.195801157462741,0.343143423810856,0,0,0,0.909382714338778,0,2.72151263996712,2.23297027036899,7.51963669111506,8.41980283299221,1.66580894032411,3.58195074346692,4.3430558708774,7.42090332224955,1.54209693802656,1.9531789784444,0.410635780069046,1.55776328755086,0.813472649219715,0.120859449591622,1.80455823272956,0.184161977871793,0.918515585316854,0.546273504020151,0.786746489756545,0,0,0,0,0,2.27466768141793,0.680374821106063,2.37507507712353,7.71136263451447,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,1.14853107599234,1.95018073810956,1.6068392984416,0,0,0.307007349452259,0.413509717453592,0.537101224341368,0.145016693914229,0.170453254832202,0.445160178233687,1.32227932288782,2.30628080838127,1.02090169995667,0.10115778085555,0,6.2962469366128,0,0.308033580176089,0,0,1.29726953372744,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0.719489830333259,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,1.46228093778771,1.05650146756755,0.136499911407986,0.848432591722276,0,0,6.6343897524122,0.876901770507525,1.15755106853338,0.655894752046633,1.21746226177622,3.0982349809975,0.563391205064483,0.573645408816206,0.491245205065606,0.7133421029625,0,1.26664581178598,0.329294892959902,0,0,0.384888450902048,0,2.17781969722645,0.188287601553558,1.72202149068492,1.68471475667626,1.7737206141467,2.75668080248351,0,0,0,0,0,0,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,6.14321404198464,0,0,0,0,0,0.398495976502139,0,0,0,0,2.17727711363265,1.52776196950456,0,0,0.295930216910801,2.3948309234694,3.33410970433911,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.11394205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| ||
|short_description=p@chr15:39882160..39882178,+ | |||
}} | }} |
Latest revision as of 01:17, 25 July 2015
Short description: | p@chr15:39882160..39882178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39882160..39882178, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.62e-19 | 76 |
endothelial cell | 6.13e-18 | 36 |
endothelial cell of vascular tree | 6.61e-17 | 24 |
meso-epithelial cell | 2.39e-15 | 45 |
lining cell | 4.18e-11 | 58 |
barrier cell | 4.18e-11 | 58 |
preadipocyte | 1.17e-10 | 12 |
blood vessel endothelial cell | 1.31e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-10 | 18 |
mesodermal cell | 3.84e-09 | 121 |
lymphangioblast | 1.89e-08 | 6 |
endothelial cell of lymphatic vessel | 1.89e-08 | 6 |
vascular lymphangioblast | 1.89e-08 | 6 |
skin fibroblast | 1.02e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.77e-17 | 68 |
splanchnic layer of lateral plate mesoderm | 8.00e-15 | 83 |
vasculature | 2.51e-14 | 78 |
vascular system | 2.51e-14 | 78 |
cardiovascular system | 1.83e-13 | 109 |
epithelial tube open at both ends | 2.99e-13 | 59 |
blood vessel | 2.99e-13 | 59 |
blood vasculature | 2.99e-13 | 59 |
vascular cord | 2.99e-13 | 59 |
circulatory system | 9.15e-13 | 112 |
epithelial tube | 7.56e-11 | 117 |
blood vessel endothelium | 1.31e-10 | 18 |
endothelium | 1.31e-10 | 18 |
cardiovascular system endothelium | 1.31e-10 | 18 |
integument | 2.70e-10 | 46 |
integumental system | 2.70e-10 | 46 |
skin of body | 4.80e-10 | 41 |
artery | 9.60e-10 | 42 |
arterial blood vessel | 9.60e-10 | 42 |
arterial system | 9.60e-10 | 42 |
simple squamous epithelium | 2.17e-09 | 22 |
squamous epithelium | 5.57e-09 | 25 |
omentum | 1.28e-08 | 6 |
peritoneum | 1.28e-08 | 6 |
abdominal cavity | 1.28e-08 | 6 |
visceral peritoneum | 1.28e-08 | 6 |
surface structure | 6.67e-07 | 99 |
aorta | 7.80e-07 | 21 |
aortic system | 7.80e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.29e-07 | 5 |
myotonic disease | 1.29e-07 | 5 |
muscle tissue disease | 1.29e-07 | 5 |
myopathy | 1.29e-07 | 5 |
muscular disease | 1.29e-07 | 5 |
myotonic dystrophy | 1.29e-07 | 5 |