FFCP PHASE1:Hg19::chr4:55143418..55143448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5156 | |EntrezGene=5156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8803 | |HGNC=8803 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000507536,uc003hao.1_5end | |association_with_transcript=75bp_to_ENST00000507536,uc003hao.1_5end | ||
|cluster_id=chr4:55143418..55143448,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_7_at_PDGFRA_5end | |description=CAGE_peak_7_at_PDGFRA_5end | ||
|id=chr4:55143418..55143448,+ | |id=chr4:55143418..55143448,+ | ||
|ontology_enrichment_celltype=CL:0000839!7.37e-10!70;CL:0000557!1.38e-09!71;CL:0002194!2.03e-09!63;CL:0000576!2.03e-09!63;CL:0000040!2.03e-09!63;CL:0000559!2.03e-09!63;CL:0000766!4.85e-09!76;CL:0002009!7.31e-09!65;CL:0002322!5.96e-07!5 | |ontology_enrichment_celltype=CL:0000839!7.37e-10!70;CL:0000557!1.38e-09!71;CL:0002194!2.03e-09!63;CL:0000576!2.03e-09!63;CL:0000040!2.03e-09!63;CL:0000559!2.03e-09!63;CL:0000766!4.85e-09!76;CL:0002009!7.31e-09!65;CL:0002322!5.96e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.36e-18;39!CL:0000234;7.36e-18;39!CL:0002322;2.93e-13;5!CL:0000860;6.79e-13;33!CL:0002057;6.79e-13;33!CL:0000235;1.48e-11;6!CL:0000990;2.79e-07;8!CL:0000576;6.18e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.97e-17,48;CL:0000234,6.97e-17,48;CL:0002194,1.06e-16,59;CL:0000576,1.06e-16,59;CL:0000040,1.06e-16,59;CL:0000559,1.06e-16,59;CL:0002009,4.98e-16,61;CL:0000839,1.57e-14,66;CL:0000557,2.95e-14,67;CL:0002322,4.63e-13,5;CL:0000766,5.26e-13,72;CL:0000235,1.78e-11,6;CL:0000860,2.07e-10,42;CL:0002057,2.07e-10,42;CL:0002087,6.60e-10,115;CL:0000738,9.77e-10,136;CL:0000763,1.18e-09,108;CL:0000049,1.18e-09,108;CL:0002031,2.62e-09,120;CL:0000990,1.66e-07,8;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,5.80e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-08;42 | |||
|ontology_enrichment_disease=DOID:2394!3.74e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.40e-12!112;UBERON:0002390!1.16e-10!102;UBERON:0003061!1.16e-10!102;UBERON:0003081!1.27e-08!216;UBERON:0002405!2.23e-08!115;UBERON:0003688!7.18e-08!6;UBERON:0002358!7.18e-08!6;UBERON:0003684!7.18e-08!6;UBERON:0001178!7.18e-08!6;UBERON:0002371!1.78e-07!80 | |ontology_enrichment_uberon=UBERON:0002193!1.40e-12!112;UBERON:0002390!1.16e-10!102;UBERON:0003061!1.16e-10!102;UBERON:0003081!1.27e-08!216;UBERON:0002405!2.23e-08!115;UBERON:0003688!7.18e-08!6;UBERON:0002358!7.18e-08!6;UBERON:0003684!7.18e-08!6;UBERON:0001178!7.18e-08!6;UBERON:0002371!1.78e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.56e-11;6!UBERON:0002358;4.56e-11;6!UBERON:0003684;4.56e-11;6!UBERON:0001178;4.56e-11;6!UBERON:0004457;2.12e-07;9!UBERON:0000042;2.12e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.02e-12,76;UBERON:0002390,5.11e-11,98;UBERON:0003061,5.11e-11,98;UBERON:0004765,5.24e-11,90;UBERON:0001474,5.83e-11,82;UBERON:0003688,9.88e-11,6;UBERON:0002358,9.88e-11,6;UBERON:0003684,9.88e-11,6;UBERON:0001178,9.88e-11,6;UBERON:0001434,9.92e-11,100;UBERON:0002193,1.32e-09,108;UBERON:0002405,3.17e-09,93 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.26858963686374,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0,26.4677000936378,44.3158022295344,43.2762480696111,0,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0,0,0,30.6761709173646,47.8712778291916,36.229103795279,0,0,0,28.8935965045255,40.1541847183555,37.5736701339852,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,0.696518949197069,1.72845348674525,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,1.20848795132744,0,0.488124115096339,0.367663080345869,0,0,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0.993943903390637,0,0.264818361626438,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22595118319608,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.276149695926898,0,0,0,0,1.54608682530637,0.272746120590835,0.573609190778008,1.34171076742555,0.530119073285941,1.16193942869518,1.24393266018445,2.27088765788066,1.09493207722749,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0.761016608938393,0,0,4.18568910348575,4.21207677250628,5.7966153292604,0.93733833986777,0.671928512795438,1.98485136139341,0,0,0,0,0,0.414656231081544,0.864719720501769,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94749944296634,9.58686804460323,5.89840647974137,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,1.02511319404561,1.02341449813341,0.482561763430822,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0.429374660225974,0,0,0.38126038784765,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,1.5602073798847,0,0,0,0,0,0,0.445234820091624,1.48323486804084,0,0,0.276283915531148,0,0.306806047506464,0,7.15391051622157,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.593042257361244,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.67952103036807,0.523014231561666,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,1.44677833618517,0.550157746388935,1.66176135211674,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0.63718706865481,1.34940933649081,0,0,0.53168342911599,0.521745061811734,0.150257608997218,6.85449381903832,0.406870733204662,0.545545977607678,0.644463342254931,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.86010776438708,1.63565394255844,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13549782351571,0.655593431782173,0,0.203977659483963,0,0.643264296743914,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0.224263725161227,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 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| ||
|short_description=p7@PDGFRA | |short_description=p7@PDGFRA | ||
}} | }} |
Latest revision as of 00:52, 18 September 2015
Short description: | p7@PDGFRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PDGFRA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 75bp_to_ENST00000507536, uc003hao.1_5end |
EntrezGene: | PDGFRA |
HGNC: | 8803 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.97e-17 | 48 |
phagocyte | 6.97e-17 | 48 |
monopoietic cell | 1.06e-16 | 59 |
monocyte | 1.06e-16 | 59 |
monoblast | 1.06e-16 | 59 |
promonocyte | 1.06e-16 | 59 |
macrophage dendritic cell progenitor | 4.98e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.57e-14 | 66 |
granulocyte monocyte progenitor cell | 2.95e-14 | 67 |
embryonic stem cell | 4.63e-13 | 5 |
myeloid leukocyte | 5.26e-13 | 72 |
macrophage | 1.78e-11 | 6 |
classical monocyte | 2.07e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-10 | 42 |
nongranular leukocyte | 6.60e-10 | 115 |
leukocyte | 9.77e-10 | 136 |
myeloid cell | 1.18e-09 | 108 |
common myeloid progenitor | 1.18e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 2.62e-09 | 120 |
conventional dendritic cell | 1.66e-07 | 8 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 5.80e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.02e-12 | 76 |
hematopoietic system | 5.11e-11 | 98 |
blood island | 5.11e-11 | 98 |
skeletal element | 5.24e-11 | 90 |
bone element | 5.83e-11 | 82 |
omentum | 9.88e-11 | 6 |
peritoneum | 9.88e-11 | 6 |
abdominal cavity | 9.88e-11 | 6 |
visceral peritoneum | 9.88e-11 | 6 |
skeletal system | 9.92e-11 | 100 |
hemolymphoid system | 1.32e-09 | 108 |
immune system | 3.17e-09 | 93 |