FFCP PHASE1:Hg19::chr5:10442309..10442325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83853 | |EntrezGene=83853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24060 | |HGNC=24060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000512022_5end | |association_with_transcript=116bp_to_ENST00000512022_5end | ||
|cluster_id=chr5:10442309..10442325,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_ROPN1L_5end | |description=CAGE_peak_4_at_ROPN1L_5end | ||
|id=chr5:10442309..10442325,+ | |id=chr5:10442309..10442325,+ | ||
|ontology_enrichment_celltype=CL:0000775!1.27e-20!3;CL:0000094!4.92e-08!8;CL:0002127!2.17e-07!1;CL:0000914!2.17e-07!1;CL:0000911!2.17e-07!1;CL:0000814!2.17e-07!1;CL:0002042!2.17e-07!1;CL:0002039!2.17e-07!1;CL:0002040!2.17e-07!1;CL:0002041!2.17e-07!1 | |ontology_enrichment_celltype=CL:0000775!1.27e-20!3;CL:0000094!4.92e-08!8;CL:0002127!2.17e-07!1;CL:0000914!2.17e-07!1;CL:0000911!2.17e-07!1;CL:0000814!2.17e-07!1;CL:0002042!2.17e-07!1;CL:0002039!2.17e-07!1;CL:0002040!2.17e-07!1;CL:0002041!2.17e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.96e-66;3!CL:0000094;1.18e-25;8!CL:0000081;5.38e-19;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.68e-66,3;CL:0000094,1.26e-25,8;CL:0000081,5.63e-19,11 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.12e-21;10!UBERON:0005564;8.12e-21;10 | |||
|ontology_enrichment_disease=DOID:8552!1.58e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.39e-07!1;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1 | |ontology_enrichment_uberon=UBERON:0001301!1.39e-07!1;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.04e-25;8!UBERON:0003135;4.91e-19;11!UBERON:0000991;1.65e-10;21!UBERON:0003101;4.43e-10;22!UBERON:0000079;4.43e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.81e-26,8;UBERON:0003135,4.69e-19,11;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0004176,4.33e-10,22;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22 | |||
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|short_description=p4@ROPN1L | |short_description=p4@ROPN1L | ||
}} | }} |
Latest revision as of 14:21, 19 September 2015
Short description: | p4@ROPN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ROPN1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 116bp_to_ENST00000512022_5end |
EntrezGene: | ROPN1L |
HGNC: | 24060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.68e-66 | 3 |
granulocyte | 1.26e-25 | 8 |
blood cell | 5.63e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
testis | 9.81e-26 | 8 |
male reproductive organ | 4.69e-19 | 11 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
external genitalia | 4.33e-10 | 22 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |