FFCP PHASE1:Hg19::chr7:115863017..115863029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26136 | |EntrezGene=26136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14620 | |HGNC=14620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc003vhp.2,uc010lka.1_5end | |association_with_transcript=-5bp_to_uc003vhp.2,uc010lka.1_5end | ||
|cluster_id=chr7:115863017..115863029,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_17_at_TES_5end | |description=CAGE_peak_17_at_TES_5end | ||
|id=chr7:115863017..115863029,+ | |id=chr7:115863017..115863029,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.56e-19;1!UBERON:0000358;3.25e-19;1!UBERON:0007297;1.89e-10;2!UBERON:0006603;6.61e-10;65!UBERON:0005795;3.90e-08;10!UBERON:0009847;2.55e-07;3!UBERON:0003353;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.97e-15!3;UBERON:0004054!2.97e-15!3;UBERON:0004175!6.77e-14!25;UBERON:0007023!3.79e-13!115;UBERON:0005156!1.13e-12!59;UBERON:0000990!1.13e-12!59;UBERON:0003133!8.23e-12!48;UBERON:0005904!1.47e-11!4;UBERON:0003135!7.97e-11!11;UBERON:0003101!9.95e-10!22;UBERON:0000079!9.95e-10!22;UBERON:0005795!3.09e-07!22;UBERON:0003975!3.51e-07!22 | |ontology_enrichment_uberon=UBERON:0006947!2.97e-15!3;UBERON:0004054!2.97e-15!3;UBERON:0004175!6.77e-14!25;UBERON:0007023!3.79e-13!115;UBERON:0005156!1.13e-12!59;UBERON:0000990!1.13e-12!59;UBERON:0003133!8.23e-12!48;UBERON:0005904!1.47e-11!4;UBERON:0003135!7.97e-11!11;UBERON:0003101!9.95e-10!22;UBERON:0000079!9.95e-10!22;UBERON:0005795!3.09e-07!22;UBERON:0003975!3.51e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.99e-25;3!UBERON:0004054;2.99e-25;3!UBERON:0001000;1.30e-19;1!UBERON:0005352;1.30e-19;1!UBERON:0000998;1.56e-19;1!UBERON:0006868;1.56e-19;1!UBERON:0005795;1.88e-19;1!UBERON:0005904;3.26e-19;4!UBERON:0006834;4.69e-19;1!UBERON:0004175;4.09e-14;21!UBERON:0001255;1.43e-10;2!UBERON:0001556;1.43e-10;2!UBERON:0000058;2.92e-08;10!UBERON:0003101;4.61e-08;22!UBERON:0000079;4.61e-08;22!UBERON:0003135;1.37e-07;11!UBERON:0003133;5.04e-07;44!UBERON:0003937;5.55e-07;12!UBERON:0005399;5.55e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.99e-25,3;UBERON:0004054,2.99e-25,3;UBERON:0001000,1.30e-19,1;UBERON:0005352,1.30e-19,1;UBERON:0000998,1.56e-19,1;UBERON:0006868,1.56e-19,1;UBERON:0005904,3.26e-19,4;UBERON:0006834,3.91e-19,1;UBERON:0004175,6.21e-12,25;UBERON:0005156,7.28e-11,59;UBERON:0000990,7.28e-11,59;UBERON:0001255,1.43e-10,2;UBERON:0001556,1.43e-10,2;UBERON:0007023,1.07e-09,114;UBERON:0003133,1.78e-09,48;UBERON:0003101,4.66e-08,22;UBERON:0000079,4.66e-08,22;UBERON:0005795,5.39e-08,22;UBERON:0003135,1.37e-07,11;UBERON:0003937,5.64e-07,12;UBERON:0005399,5.64e-07,12 | |||
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|short_description=p17@TES | |short_description=p17@TES | ||
}} | }} |
Latest revision as of 06:52, 25 September 2015
Short description: | p17@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TES_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -5bp_to_uc003vhp.2, uc010lka.1_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.99e-25 | 3 |
internal male genitalia | 2.99e-25 | 3 |
vas deferens | 1.30e-19 | 1 |
spermatic cord | 1.30e-19 | 1 |
seminal vesicle | 1.56e-19 | 1 |
seminal fluid secreting gland | 1.56e-19 | 1 |
duct of male reproductive system | 3.26e-19 | 4 |
uterus or analog | 3.91e-19 | 1 |
internal genitalia | 6.21e-12 | 25 |
reproductive structure | 7.28e-11 | 59 |
reproductive system | 7.28e-11 | 59 |
urinary bladder | 1.43e-10 | 2 |
lower urinary tract | 1.43e-10 | 2 |
adult organism | 1.07e-09 | 114 |
reproductive organ | 1.78e-09 | 48 |
male organism | 4.66e-08 | 22 |
male reproductive system | 4.66e-08 | 22 |
embryonic uterus | 5.39e-08 | 22 |
male reproductive organ | 1.37e-07 | 11 |
sex gland | 5.64e-07 | 12 |
male reproductive gland | 5.64e-07 | 12 |