Personal tools

FFCP PHASE1:Hg19::chr7:43153309..43153331,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=23072
|EntrezGene=23072
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=22195
|HGNC=22195
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-8bp_to_ENST00000492310,uc003tie.1_5end
|association_with_transcript=-8bp_to_ENST00000492310,uc003tie.1_5end
|cluster_id=chr7:43153309..43153331,+
|coexpression_cluster_id=C3
|description=CAGE_peak_11_at_HECW1_5end
|description=CAGE_peak_11_at_HECW1_5end
|id=chr7:43153309..43153331,+
|id=chr7:43153309..43153331,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006601;7.49e-13;82!UBERON:0006238;4.80e-09;10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.86e-70!57;UBERON:0005068!9.86e-70!57;UBERON:0006241!9.86e-70!57;UBERON:0007135!9.86e-70!57;UBERON:0001017!6.96e-68!82;UBERON:0000955!1.71e-66!69;UBERON:0006238!1.71e-66!69;UBERON:0005743!2.43e-64!86;UBERON:0002616!3.51e-63!59;UBERON:0002780!1.57e-58!41;UBERON:0001890!1.57e-58!41;UBERON:0006240!1.57e-58!41;UBERON:0000073!1.94e-57!94;UBERON:0001016!1.94e-57!94;UBERON:0003080!5.31e-57!42;UBERON:0001893!5.24e-56!34;UBERON:0002020!1.13e-55!34;UBERON:0003528!1.13e-55!34;UBERON:0002619!5.93e-55!22;UBERON:0001869!6.68e-55!32;UBERON:0001950!1.91e-54!20;UBERON:0002791!9.69e-53!33;UBERON:0003075!4.12e-49!86;UBERON:0007284!4.12e-49!86;UBERON:0000956!5.05e-48!25;UBERON:0000203!5.05e-48!25;UBERON:0002346!1.52e-46!90;UBERON:0007023!1.79e-39!115;UBERON:0003056!2.56e-37!61;UBERON:0000033!9.24e-36!123;UBERON:0000153!1.10e-33!129;UBERON:0007811!1.10e-33!129;UBERON:0004121!5.22e-28!169;UBERON:0000924!3.82e-27!173;UBERON:0006601!3.82e-27!173;UBERON:0000200!1.52e-22!6;UBERON:0001872!2.70e-19!5;UBERON:0001871!3.69e-16!7;UBERON:0000025!1.16e-15!194;UBERON:0003076!1.09e-13!15;UBERON:0003057!1.09e-13!15;UBERON:0004733!1.87e-13!12;UBERON:0002028!1.87e-13!12;UBERON:0007277!1.87e-13!12;UBERON:0002021!1.60e-12!5;UBERON:0004732!2.42e-12!13;UBERON:0002771!7.13e-12!3;UBERON:0004111!8.15e-12!241;UBERON:0000988!3.01e-11!3;UBERON:0002298!1.18e-10!8;UBERON:0000475!1.25e-10!365;UBERON:0000477!4.04e-10!286;UBERON:0002308!8.64e-10!9;UBERON:0000125!8.64e-10!9;UBERON:0002680!9.15e-10!9;UBERON:0001895!9.15e-10!9;UBERON:0010092!9.15e-10!9;UBERON:0000483!2.02e-09!309;UBERON:0000119!3.04e-09!312;UBERON:0001870!7.63e-09!2;UBERON:0001897!1.80e-08!2;UBERON:0000064!1.83e-08!219;UBERON:0000062!5.45e-08!511;UBERON:0002360!6.62e-08!2;UBERON:0002148!6.62e-08!2;UBERON:0009662!6.62e-08!2;UBERON:0000094!6.62e-08!2;UBERON:0007645!6.62e-08!2;UBERON:0000349!3.94e-07!5
|ontology_enrichment_uberon=UBERON:0001049!9.86e-70!57;UBERON:0005068!9.86e-70!57;UBERON:0006241!9.86e-70!57;UBERON:0007135!9.86e-70!57;UBERON:0001017!6.96e-68!82;UBERON:0000955!1.71e-66!69;UBERON:0006238!1.71e-66!69;UBERON:0005743!2.43e-64!86;UBERON:0002616!3.51e-63!59;UBERON:0002780!1.57e-58!41;UBERON:0001890!1.57e-58!41;UBERON:0006240!1.57e-58!41;UBERON:0000073!1.94e-57!94;UBERON:0001016!1.94e-57!94;UBERON:0003080!5.31e-57!42;UBERON:0001893!5.24e-56!34;UBERON:0002020!1.13e-55!34;UBERON:0003528!1.13e-55!34;UBERON:0002619!5.93e-55!22;UBERON:0001869!6.68e-55!32;UBERON:0001950!1.91e-54!20;UBERON:0002791!9.69e-53!33;UBERON:0003075!4.12e-49!86;UBERON:0007284!4.12e-49!86;UBERON:0000956!5.05e-48!25;UBERON:0000203!5.05e-48!25;UBERON:0002346!1.52e-46!90;UBERON:0007023!1.79e-39!115;UBERON:0003056!2.56e-37!61;UBERON:0000033!9.24e-36!123;UBERON:0000153!1.10e-33!129;UBERON:0007811!1.10e-33!129;UBERON:0004121!5.22e-28!169;UBERON:0000924!3.82e-27!173;UBERON:0006601!3.82e-27!173;UBERON:0000200!1.52e-22!6;UBERON:0001872!2.70e-19!5;UBERON:0001871!3.69e-16!7;UBERON:0000025!1.16e-15!194;UBERON:0003076!1.09e-13!15;UBERON:0003057!1.09e-13!15;UBERON:0004733!1.87e-13!12;UBERON:0002028!1.87e-13!12;UBERON:0007277!1.87e-13!12;UBERON:0002021!1.60e-12!5;UBERON:0004732!2.42e-12!13;UBERON:0002771!7.13e-12!3;UBERON:0004111!8.15e-12!241;UBERON:0000988!3.01e-11!3;UBERON:0002298!1.18e-10!8;UBERON:0000475!1.25e-10!365;UBERON:0000477!4.04e-10!286;UBERON:0002308!8.64e-10!9;UBERON:0000125!8.64e-10!9;UBERON:0002680!9.15e-10!9;UBERON:0001895!9.15e-10!9;UBERON:0010092!9.15e-10!9;UBERON:0000483!2.02e-09!309;UBERON:0000119!3.04e-09!312;UBERON:0001870!7.63e-09!2;UBERON:0001897!1.80e-08!2;UBERON:0000064!1.83e-08!219;UBERON:0000062!5.45e-08!511;UBERON:0002360!6.62e-08!2;UBERON:0002148!6.62e-08!2;UBERON:0009662!6.62e-08!2;UBERON:0000094!6.62e-08!2;UBERON:0007645!6.62e-08!2;UBERON:0000349!3.94e-07!5
|ontology_enrichment_uberon_v019=UBERON:0001950;4.22e-70;20!UBERON:0002619;7.07e-64;22!UBERON:0000956;2.47e-56;25!UBERON:0000203;2.47e-56;25!UBERON:0001869;6.51e-54;32!UBERON:0001893;1.32e-50;34!UBERON:0002791;1.20e-45;32!UBERON:0003528;4.70e-44;34!UBERON:0002020;4.70e-44;34!UBERON:0002780;1.85e-38;41!UBERON:0001890;1.85e-38;41!UBERON:0001872;3.30e-34;5!UBERON:0000955;5.59e-29;68!UBERON:0000200;2.69e-28;6!UBERON:0000073;3.96e-27;53!UBERON:0002616;3.96e-27;53!UBERON:0001017;6.25e-21;75!UBERON:0002021;1.49e-19;5!UBERON:0001016;1.36e-16;83!UBERON:0001870;4.93e-15;3!UBERON:0002902;2.63e-12;1!UBERON:0009899;2.63e-12;1!UBERON:0002581;4.06e-12;1!UBERON:0002022;4.06e-12;1!UBERON:0007190;4.06e-12;1!UBERON:0001882;1.07e-11;1!UBERON:0005403;1.07e-11;1!UBERON:0007023;1.68e-08;114!UBERON:0011216;8.05e-08;132!UBERON:0001871;7.86e-07;6
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.99e-70,20;UBERON:0002619,6.72e-64,22;UBERON:0001869,3.50e-60,32;UBERON:0001893,1.22e-56,34;UBERON:0000956,2.36e-56,25;UBERON:0000203,2.36e-56,25;UBERON:0002780,4.04e-54,41;UBERON:0001890,4.04e-54,41;UBERON:0003080,4.04e-54,41;UBERON:0006240,4.04e-54,41;UBERON:0002791,1.03e-51,32;UBERON:0000955,1.46e-51,68;UBERON:0006238,1.46e-51,68;UBERON:0003528,1.16e-48,34;UBERON:0002020,1.16e-48,34;UBERON:0000073,1.91e-47,53;UBERON:0002616,1.91e-47,53;UBERON:0001049,7.68e-45,56;UBERON:0005068,7.68e-45,56;UBERON:0006241,7.68e-45,56;UBERON:0007135,7.68e-45,56;UBERON:0001017,3.79e-43,81;UBERON:0001016,1.03e-38,89;UBERON:0003056,5.02e-36,61;UBERON:0001872,4.66e-34,5;UBERON:0003075,3.89e-30,82;UBERON:0007284,3.89e-30,82;UBERON:0002346,1.19e-28,86;UBERON:0000200,4.10e-28,6;UBERON:0007023,2.01e-27,114;UBERON:0010371,2.29e-23,104;UBERON:0002021,1.40e-19,5;UBERON:0004121,2.22e-19,171;UBERON:0000924,2.22e-19,171;UBERON:0006601,2.22e-19,171;UBERON:0010314,5.64e-18,132;UBERON:0001870,4.60e-15,3;UBERON:0011216,2.76e-14,223;UBERON:0002902,2.63e-12,1;UBERON:0009899,2.63e-12,1;UBERON:0002022,3.27e-12,1;UBERON:0007190,4.53e-12,1;UBERON:0002581,5.62e-12,1;UBERON:0000025,1.15e-11,192;UBERON:0001882,1.32e-11,1;UBERON:0005403,1.32e-11,1;UBERON:0004111,7.34e-09,240;UBERON:0001871,7.63e-07,6;UBERON:0001897,9.44e-07,2;UBERON:0010225,9.44e-07,2
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,2.36923270966296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.876336514945499,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,1.41696576325585,0.478901577171454,1.8460472781668,0,4.08027789538886,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,2.34323429584154,1.65349437200947,2.15613754659283,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,2.10472875401117,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97175321553653,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.20686599172379,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,2.36923270966296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.876336514945499,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,1.41696576325585,0.478901577171454,1.8460472781668,0,4.08027789538886,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,2.34323429584154,1.65349437200947,2.15613754659283,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,2.10472875401117,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97175321553653,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.20686599172379,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p11@HECW1
|short_description=p11@HECW1
}}
}}

Latest revision as of 15:21, 18 September 2015

Short description:p11@HECW1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_11_at_HECW1_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: -8bp_to_ENST00000492310, uc003tie.1_5end
EntrezGene:HECW1
HGNC: 22195
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data