FFCP PHASE1:Hg19::chr8:136469749..136469760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10656 | |EntrezGene=10656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18117 | |HGNC=18117 | ||
|TSSclassifier=strong | |||
|UniProt=O75525 | |UniProt=O75525 | ||
|association_with_transcript=33bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end | |association_with_transcript=33bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end | ||
|cluster_id=chr8:136469749..136469760,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_KHDRBS3_5end | |description=CAGE_peak_8_at_KHDRBS3_5end | ||
|id=chr8:136469749..136469760,+ | |id=chr8:136469749..136469760,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;8.34e-34;1!CL:0000557;8.34e-34;1!CL:0000346;3.06e-12;3!CL:1000428;3.06e-12;3!CL:0002559;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0002559,7.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.65e-20!94;UBERON:0001016!2.65e-20!94;UBERON:0001049!2.50e-19!57;UBERON:0005068!2.50e-19!57;UBERON:0006241!2.50e-19!57;UBERON:0007135!2.50e-19!57;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0001893!1.77e-18!34;UBERON:0002616!2.08e-18!59;UBERON:0002020!2.12e-18!34;UBERON:0003528!2.12e-18!34;UBERON:0001017!3.53e-18!82;UBERON:0005743!4.82e-18!86;UBERON:0002791!4.96e-17!33;UBERON:0000956!8.00e-17!25;UBERON:0000203!8.00e-17!25;UBERON:0001950!1.09e-16!20;UBERON:0002780!3.10e-16!41;UBERON:0001890!3.10e-16!41;UBERON:0006240!3.10e-16!41;UBERON:0001869!3.70e-16!32;UBERON:0003080!1.03e-15!42;UBERON:0002619!6.79e-15!22;UBERON:0003075!2.68e-14!86;UBERON:0007284!2.68e-14!86;UBERON:0002346!2.78e-13!90;UBERON:0004121!1.56e-12!169;UBERON:0003056!2.64e-12!61;UBERON:0000033!2.75e-12!123;UBERON:0000153!5.05e-12!129;UBERON:0007811!5.05e-12!129;UBERON:0000924!5.68e-12!173;UBERON:0006601!5.68e-12!173;UBERON:0007023!1.47e-11!115;UBERON:0001872!4.07e-11!5;UBERON:0000025!9.45e-09!194;UBERON:0000200!2.43e-08!6;UBERON:0002298!1.54e-07!8;UBERON:0004111!8.25e-07!241 | |ontology_enrichment_uberon=UBERON:0000073!2.65e-20!94;UBERON:0001016!2.65e-20!94;UBERON:0001049!2.50e-19!57;UBERON:0005068!2.50e-19!57;UBERON:0006241!2.50e-19!57;UBERON:0007135!2.50e-19!57;UBERON:0000955!1.68e-18!69;UBERON:0006238!1.68e-18!69;UBERON:0001893!1.77e-18!34;UBERON:0002616!2.08e-18!59;UBERON:0002020!2.12e-18!34;UBERON:0003528!2.12e-18!34;UBERON:0001017!3.53e-18!82;UBERON:0005743!4.82e-18!86;UBERON:0002791!4.96e-17!33;UBERON:0000956!8.00e-17!25;UBERON:0000203!8.00e-17!25;UBERON:0001950!1.09e-16!20;UBERON:0002780!3.10e-16!41;UBERON:0001890!3.10e-16!41;UBERON:0006240!3.10e-16!41;UBERON:0001869!3.70e-16!32;UBERON:0003080!1.03e-15!42;UBERON:0002619!6.79e-15!22;UBERON:0003075!2.68e-14!86;UBERON:0007284!2.68e-14!86;UBERON:0002346!2.78e-13!90;UBERON:0004121!1.56e-12!169;UBERON:0003056!2.64e-12!61;UBERON:0000033!2.75e-12!123;UBERON:0000153!5.05e-12!129;UBERON:0007811!5.05e-12!129;UBERON:0000924!5.68e-12!173;UBERON:0006601!5.68e-12!173;UBERON:0007023!1.47e-11!115;UBERON:0001872!4.07e-11!5;UBERON:0000025!9.45e-09!194;UBERON:0000200!2.43e-08!6;UBERON:0002298!1.54e-07!8;UBERON:0004111!8.25e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000412;3.06e-12;3!UBERON:0001992;3.06e-12;3!UBERON:0002073;7.25e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000412,2.89e-12,3;UBERON:0001992,2.89e-12,3;UBERON:0002073,7.01e-08,5;UBERON:0005086,7.01e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p8@KHDRBS3 | |short_description=p8@KHDRBS3 | ||
}} | }} |
Latest revision as of 18:09, 16 September 2015
Short description: | p8@KHDRBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KHDRBS3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 33bp_to_NM_006558, uc003yuv.2, uc003yuw.2_5end |
EntrezGene: | KHDRBS3 |
HGNC: | 18117 |
UniProt: | O75525 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.89e-12 | 3 |
stem cell of epidermis | 2.89e-12 | 3 |
hair follicle cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
dermal papilla | 2.89e-12 | 3 |
papillary layer of dermis | 2.89e-12 | 3 |
hair follicle | 7.01e-08 | 5 |
hair follicle placode | 7.01e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |