FFCP PHASE1:Hg19::chrX:21776185..21776201,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23676 | |EntrezGene=23676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11122 | |HGNC=11122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc004daa.2_5end | |association_with_transcript=28bp_to_uc004daa.2_5end | ||
|cluster_id=chrX:21776185..21776201,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_SMPX_5end | |description=CAGE_peak_3_at_SMPX_5end | ||
|id=chrX:21776185..21776201,- | |id=chrX:21776185..21776201,- | ||
|ontology_enrichment_celltype=CL:0000188!6.97e-10!9 | |ontology_enrichment_celltype=CL:0000188!6.97e-10!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.21e-10;4!UBERON:0007284;1.21e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.24e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.15e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-53!115;UBERON:0001950!1.10e-23!20;UBERON:0002619!3.32e-21!22;UBERON:0000956!3.27e-18!25;UBERON:0000203!3.27e-18!25;UBERON:0001049!1.93e-17!57;UBERON:0005068!1.93e-17!57;UBERON:0006241!1.93e-17!57;UBERON:0007135!1.93e-17!57;UBERON:0001893!1.98e-17!34;UBERON:0002780!4.70e-17!41;UBERON:0001890!4.70e-17!41;UBERON:0006240!4.70e-17!41;UBERON:0001869!5.94e-17!32;UBERON:0003075!6.93e-17!86;UBERON:0007284!6.93e-17!86;UBERON:0003080!1.62e-16!42;UBERON:0002791!3.65e-16!33;UBERON:0002346!9.82e-16!90;UBERON:0002020!1.26e-15!34;UBERON:0003528!1.26e-15!34;UBERON:0002616!4.19e-15!59;UBERON:0005743!7.47e-14!86;UBERON:0000955!7.91e-13!69;UBERON:0006238!7.91e-13!69;UBERON:0001017!1.01e-12!82;UBERON:0003056!7.28e-12!61;UBERON:0000200!7.38e-12!6;UBERON:0000073!8.54e-12!94;UBERON:0001016!8.54e-12!94;UBERON:0000153!1.05e-11!129;UBERON:0007811!1.05e-11!129;UBERON:0001871!2.69e-11!7;UBERON:0000481!3.70e-11!347;UBERON:0000033!4.85e-10!123;UBERON:0004121!2.45e-09!169;UBERON:0000924!6.77e-09!173;UBERON:0006601!6.77e-09!173;UBERON:0004151!6.57e-08!3;UBERON:0003978!9.15e-08!3;UBERON:0009751!9.15e-08!3;UBERON:0000946!9.15e-08!3;UBERON:0002523!9.15e-08!3;UBERON:0005983!9.15e-08!3;UBERON:0002165!9.15e-08!3;UBERON:0002062!9.15e-08!3;UBERON:0007280!9.15e-08!3;UBERON:0000483!5.32e-07!309;UBERON:0002021!5.71e-07!5;UBERON:0000119!8.22e-07!312;UBERON:0002771!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.49e-53!115;UBERON:0001950!1.10e-23!20;UBERON:0002619!3.32e-21!22;UBERON:0000956!3.27e-18!25;UBERON:0000203!3.27e-18!25;UBERON:0001049!1.93e-17!57;UBERON:0005068!1.93e-17!57;UBERON:0006241!1.93e-17!57;UBERON:0007135!1.93e-17!57;UBERON:0001893!1.98e-17!34;UBERON:0002780!4.70e-17!41;UBERON:0001890!4.70e-17!41;UBERON:0006240!4.70e-17!41;UBERON:0001869!5.94e-17!32;UBERON:0003075!6.93e-17!86;UBERON:0007284!6.93e-17!86;UBERON:0003080!1.62e-16!42;UBERON:0002791!3.65e-16!33;UBERON:0002346!9.82e-16!90;UBERON:0002020!1.26e-15!34;UBERON:0003528!1.26e-15!34;UBERON:0002616!4.19e-15!59;UBERON:0005743!7.47e-14!86;UBERON:0000955!7.91e-13!69;UBERON:0006238!7.91e-13!69;UBERON:0001017!1.01e-12!82;UBERON:0003056!7.28e-12!61;UBERON:0000200!7.38e-12!6;UBERON:0000073!8.54e-12!94;UBERON:0001016!8.54e-12!94;UBERON:0000153!1.05e-11!129;UBERON:0007811!1.05e-11!129;UBERON:0001871!2.69e-11!7;UBERON:0000481!3.70e-11!347;UBERON:0000033!4.85e-10!123;UBERON:0004121!2.45e-09!169;UBERON:0000924!6.77e-09!173;UBERON:0006601!6.77e-09!173;UBERON:0004151!6.57e-08!3;UBERON:0003978!9.15e-08!3;UBERON:0009751!9.15e-08!3;UBERON:0000946!9.15e-08!3;UBERON:0002523!9.15e-08!3;UBERON:0005983!9.15e-08!3;UBERON:0002165!9.15e-08!3;UBERON:0002062!9.15e-08!3;UBERON:0007280!9.15e-08!3;UBERON:0000483!5.32e-07!309;UBERON:0002021!5.71e-07!5;UBERON:0000119!8.22e-07!312;UBERON:0002771!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.59e-14;3!UBERON:0003978;4.91e-14;3!UBERON:0000946;4.91e-14;3!UBERON:0007100;3.28e-13;25!UBERON:0005090;2.53e-10;2!UBERON:0001630;2.53e-10;2!UBERON:0000341;3.79e-10;2!UBERON:0002081;6.06e-10;2!UBERON:0002133;8.07e-10;2!UBERON:0001134;1.43e-09;16!UBERON:0002036;1.43e-09;16!UBERON:0001829;1.89e-09;2!UBERON:0003127;2.01e-09;2!UBERON:0001723;3.03e-07;3!UBERON:0001033;3.03e-07;3!UBERON:0000948;7.22e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.03e-23,114;UBERON:0004151,2.53e-14,3;UBERON:0003978,4.91e-14,3;UBERON:0009751,4.91e-14,3;UBERON:0000946,4.91e-14,3;UBERON:0002523,4.91e-14,3;UBERON:0005983,4.91e-14,3;UBERON:0002165,4.91e-14,3;UBERON:0002062,4.91e-14,3;UBERON:0007280,4.91e-14,3;UBERON:0003103,4.39e-13,68;UBERON:0007100,4.14e-12,27;UBERON:0005090,2.53e-10,2;UBERON:0001630,2.53e-10,2;UBERON:0000341,3.79e-10,2;UBERON:0002081,5.93e-10,2;UBERON:0010227,5.93e-10,2;UBERON:0002133,8.08e-10,2;UBERON:0003127,1.93e-09,2;UBERON:0001829,1.93e-09,2;UBERON:0001723,3.03e-07,3;UBERON:0001033,3.03e-07,3;UBERON:0010056,3.03e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0.767518373630648,0.551346289938122,0,0.145016693914229,1.19317278382541,12.6425490618367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69983884210687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,1.47773809476774,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,77.0474541406837,0.468528891450678,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,5.41652671550293,0,0,0,0,2.90967049465258,0,7.6833451865381,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2975689106861,52.7068975226872,5.74298419661451,24.7601960618749,57.9455164984371,110.023528518843,84.0465240808946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,64.322579373603,98.6517035844493,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,1.001527445652,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,2.8339315265117,0.638535436228605,1.8460472781668,0,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,1.03343398250592,0.760989722326882,0,2.74128883428591,23.3219253842968,0,0,0,0,0,0,0,0,0,0,1.05236437700559,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,68.6274567419168,128.739159797734,35.9542473714842,12.6284858195376,0,0,0,0,0,0,0.694567422971502,0,0,0.735444965261716,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,3.66983426723633,0,0,0.203974470572744,0,1.0580536810308,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,3.31667775783512,0,61.4113867874825,33.5670848363874,0,0.0620747142958579,0,0.700118741059814,6.46775004666302,82.7323642008453,153.320518886206,4.91669987006489,1.29099969706817,11.6431124791105,0,0,0,0,14.0784565442073,0,0,0,2.41528552309231,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0.767518373630648,0.551346289938122,0,0.145016693914229,1.19317278382541,12.6425490618367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69983884210687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,1.47773809476774,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,77.0474541406837,0.468528891450678,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,5.41652671550293,0,0,0,0,2.90967049465258,0,7.6833451865381,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2975689106861,52.7068975226872,5.74298419661451,24.7601960618749,57.9455164984371,110.023528518843,84.0465240808946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,64.322579373603,98.6517035844493,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,1.001527445652,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,2.8339315265117,0.638535436228605,1.8460472781668,0,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,1.03343398250592,0.760989722326882,0,2.74128883428591,23.3219253842968,0,0,0,0,0,0,0,0,0,0,1.05236437700559,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,68.6274567419168,128.739159797734,35.9542473714842,12.6284858195376,0,0,0,0,0,0,0.694567422971502,0,0,0.735444965261716,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,3.66983426723633,0,0,0.203974470572744,0,1.0580536810308,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,3.31667775783512,0,61.4113867874825,33.5670848363874,0,0.0620747142958579,0,0.700118741059814,6.46775004666302,82.7323642008453,153.320518886206,4.91669987006489,1.29099969706817,11.6431124791105,0,0,0,0,14.0784565442073,0,0,0,2.41528552309231,0 | ||
|short_description=p3@SMPX | |short_description=p3@SMPX | ||
}} | }} |
Latest revision as of 16:52, 24 September 2015
Short description: | p3@SMPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMPX_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 28bp_to_uc004daa.2_5end |
EntrezGene: | SMPX |
HGNC: | 11122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.03e-23 | 114 |
cardiac chamber | 2.53e-14 | 3 |
valve | 4.91e-14 | 3 |
cardiac mesenchyme | 4.91e-14 | 3 |
cardial valve | 4.91e-14 | 3 |
tunica intima | 4.91e-14 | 3 |
heart layer | 4.91e-14 | 3 |
endocardium | 4.91e-14 | 3 |
endocardial cushion | 4.91e-14 | 3 |
presumptive endocardium | 4.91e-14 | 3 |
compound organ | 4.39e-13 | 68 |
primary circulatory organ | 4.14e-12 | 27 |
muscle structure | 2.53e-10 | 2 |
muscle organ | 2.53e-10 | 2 |
throat | 3.79e-10 | 2 |
cardiac atrium | 5.93e-10 | 2 |
future cardiac atrium | 5.93e-10 | 2 |
atrioventricular valve | 8.08e-10 | 2 |
open tracheal system trachea | 1.93e-09 | 2 |
major salivary gland | 1.93e-09 | 2 |
tongue | 3.03e-07 | 3 |
gustatory system | 3.03e-07 | 3 |
future tongue | 3.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.15e-10 | 2 |