FFCP PHASE1:Hg19::chr5:175837706..175837718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:175837706..175837718,- | |||
|coexpression_cluster_id=C1597 | |||
|description=CAGE_peak_at_chr5:175837706..175837718,- | |description=CAGE_peak_at_chr5:175837706..175837718,- | ||
|id=chr5:175837706..175837718,- | |id=chr5:175837706..175837718,- | ||
|ontology_enrichment_celltype=CL:0002076!2.41e-19!43;CL:0002251!5.64e-17!21;CL:0000223!6.72e-15!59;CL:0000622!3.02e-13!5;CL:0002623!5.67e-13!3;CL:0002621!6.96e-12!3;CL:0000154!4.77e-11!6;CL:0002159!1.47e-10!13;CL:0000066!7.87e-10!254;CL:0000575!3.08e-09!2;CL:0000150!2.27e-07!9;CL:0002368!4.01e-07!13 | |ontology_enrichment_celltype=CL:0002076!2.41e-19!43;CL:0002251!5.64e-17!21;CL:0000223!6.72e-15!59;CL:0000622!3.02e-13!5;CL:0002623!5.67e-13!3;CL:0002621!6.96e-12!3;CL:0000154!4.77e-11!6;CL:0002159!1.47e-10!13;CL:0000066!7.87e-10!254;CL:0000575!3.08e-09!2;CL:0000150!2.27e-07!9;CL:0002368!4.01e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002623;9.63e-17;3!CL:0002577;2.57e-16;3!CL:0000622;2.00e-10;5!CL:0000154;7.77e-09;6!CL:0000575;3.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.08e-16,3;CL:0002577,2.20e-16,3;CL:0000622,2.14e-10,5;CL:0000154,8.24e-09,6;CL:0000575,3.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.18e-13;1!UBERON:0008814;2.28e-07;2!UBERON:0010056;2.28e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!6.91e-07!14 | |ontology_enrichment_disease=DOID:1749!6.91e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!4.75e-21!21;UBERON:0000165!3.59e-18!28;UBERON:0000930!3.59e-18!28;UBERON:0001004!6.66e-15!72;UBERON:0000161!7.03e-14!35;UBERON:0001444!2.81e-13!48;UBERON:0001949!6.96e-12!3;UBERON:0004119!2.74e-11!169;UBERON:0000925!2.74e-11!169;UBERON:0006595!2.74e-11!169;UBERON:0003102!1.45e-10!95;UBERON:0001042!8.30e-10!10;UBERON:0009145!8.30e-10!10;UBERON:0003408!1.51e-09!10;UBERON:0000974!1.57e-09!10;UBERON:0006562!6.93e-09!11;UBERON:0005795!6.36e-08!22;UBERON:0003729!7.26e-08!5;UBERON:0000078!8.93e-08!18;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0004121!9.77e-07!169 | |ontology_enrichment_uberon=UBERON:0000166!4.75e-21!21;UBERON:0000165!3.59e-18!28;UBERON:0000930!3.59e-18!28;UBERON:0001004!6.66e-15!72;UBERON:0000161!7.03e-14!35;UBERON:0001444!2.81e-13!48;UBERON:0001949!6.96e-12!3;UBERON:0004119!2.74e-11!169;UBERON:0000925!2.74e-11!169;UBERON:0006595!2.74e-11!169;UBERON:0003102!1.45e-10!95;UBERON:0001042!8.30e-10!10;UBERON:0009145!8.30e-10!10;UBERON:0003408!1.51e-09!10;UBERON:0000974!1.57e-09!10;UBERON:0006562!6.93e-09!11;UBERON:0005795!6.36e-08!22;UBERON:0003729!7.26e-08!5;UBERON:0000078!8.93e-08!18;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0004121!9.77e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.47e-17;3!UBERON:0001033;6.47e-17;3!UBERON:0000165;7.70e-15;28!UBERON:0005795;2.18e-13;1!UBERON:0002372;3.54e-13;1!UBERON:0000997;3.54e-13;1!UBERON:0005056;3.54e-13;1!UBERON:0001961;3.54e-13;1!UBERON:0001744;3.54e-13;1!UBERON:0004176;3.54e-13;1!UBERON:0001042;3.54e-13;1!UBERON:0001735;3.54e-13;1!UBERON:0001987;1.75e-12;4!UBERON:0000161;3.77e-10;19!UBERON:0000166;3.77e-10;19!UBERON:0001044;7.77e-09;6!UBERON:0003293;7.77e-09;6!UBERON:0003294;7.77e-09;6!UBERON:0010047;7.77e-09;6!UBERON:0003408;7.77e-09;6!UBERON:0000167;7.77e-09;6!UBERON:0007811;9.80e-09;52!UBERON:0000974;1.26e-08;6!UBERON:0001041;3.18e-08;14!UBERON:0000153;9.21e-08;54!UBERON:0006562;3.18e-07;2!UBERON:0000341;4.55e-07;2!UBERON:0000033;8.03e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,5.57e-19,22;UBERON:0001723,6.22e-17,3;UBERON:0001033,6.22e-17,3;UBERON:0010056,6.22e-17,3;UBERON:0000165,2.51e-14,29;UBERON:0000930,2.51e-14,29;UBERON:0000997,2.95e-13,1;UBERON:0005056,2.95e-13,1;UBERON:0002372,4.23e-13,1;UBERON:0001961,4.23e-13,1;UBERON:0001744,4.23e-13,1;UBERON:0001735,4.23e-13,1;UBERON:0001987,1.56e-12,4;UBERON:0004340,1.56e-12,4;UBERON:0000161,1.78e-11,36;UBERON:0001042,2.65e-11,10;UBERON:0009145,2.65e-11,10;UBERON:0000153,2.82e-11,62;UBERON:0007811,2.82e-11,62;UBERON:0001444,3.35e-11,49;UBERON:0006562,2.51e-10,11;UBERON:0000033,1.01e-09,56;UBERON:0001044,8.24e-09,6;UBERON:0003293,8.24e-09,6;UBERON:0003294,8.24e-09,6;UBERON:0010047,8.24e-09,6;UBERON:0000167,8.24e-09,6;UBERON:0005795,9.40e-09,22;UBERON:0005631,5.18e-08,14;UBERON:0000158,5.18e-08,14;UBERON:0003124,1.52e-07,7;UBERON:0000341,5.60e-07,2;UBERON:0003102,9.82e-07,99 | |||
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| ||
|short_description=p@chr5:175837706..175837718,- | |short_description=p@chr5:175837706..175837718,- | ||
}} | }} |
Latest revision as of 13:27, 30 July 2015
Short description: | p@chr5:175837706..175837718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:175837706..175837718, - |
Coexpression cluster: | C1597_tongue_esophagus_tonsil_salivary_Urothelial_uterus_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.08e-16 | 3 |
placental epithelial cell | 2.20e-16 | 3 |
acinar cell | 2.14e-10 | 5 |
protein secreting cell | 8.24e-09 | 6 |
corneal epithelial cell | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 5.57e-19 | 22 |
tongue | 6.22e-17 | 3 |
gustatory system | 6.22e-17 | 3 |
future tongue | 6.22e-17 | 3 |
mouth | 2.51e-14 | 29 |
stomodeum | 2.51e-14 | 29 |
mammalian vulva | 2.95e-13 | 1 |
external female genitalia | 2.95e-13 | 1 |
tonsil | 4.23e-13 | 1 |
mucosa-associated lymphoid tissue | 4.23e-13 | 1 |
lymphoid tissue | 4.23e-13 | 1 |
tonsillar ring | 4.23e-13 | 1 |
placenta | 1.56e-12 | 4 |
allantois | 1.56e-12 | 4 |
orifice | 1.78e-11 | 36 |
chordate pharynx | 2.65e-11 | 10 |
pharyngeal region of foregut | 2.65e-11 | 10 |
anterior region of body | 2.82e-11 | 62 |
craniocervical region | 2.82e-11 | 62 |
subdivision of head | 3.35e-11 | 49 |
pharynx | 2.51e-10 | 11 |
head | 1.01e-09 | 56 |
saliva-secreting gland | 8.24e-09 | 6 |
gland of oral region | 8.24e-09 | 6 |
gland of foregut | 8.24e-09 | 6 |
oral gland | 8.24e-09 | 6 |
oral cavity | 8.24e-09 | 6 |
embryonic uterus | 9.40e-09 | 22 |
extraembryonic membrane | 5.18e-08 | 14 |
membranous layer | 5.18e-08 | 14 |
chorion | 1.52e-07 | 7 |
throat | 5.60e-07 | 2 |
surface structure | 9.82e-07 | 99 |