FFCP PHASE1:Hg19::chr6:130088321..130088346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:130088321..130088346,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr6:130088321..130088346,- | |description=CAGE_peak_at_chr6:130088321..130088346,- | ||
|id=chr6:130088321..130088346,- | |id=chr6:130088321..130088346,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.58e-26;1!CL:0000911;3.58e-26;1!CL:0000814;3.58e-26;1!CL:0000097;4.92e-21;5!CL:0000163;3.74e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.58e-26,1;CL:0000914,3.58e-26,1;CL:0000911,3.58e-26,1;CL:0000814,3.58e-26,1;CL:0002042,3.58e-26,1;CL:0002039,3.58e-26,1;CL:0002040,3.58e-26,1;CL:0002041,3.58e-26,1;CL:0000097,4.92e-21,5;CL:0002028,4.92e-21,5;CL:0000893,8.28e-14,2;CL:0002489,8.28e-14,2;CL:0000809,8.28e-14,2;CL:0000808,8.28e-14,2;CL:0000894,8.28e-14,2;CL:0000806,8.28e-14,2;CL:0000807,8.28e-14,2;CL:0000805,8.28e-14,2;CL:0002425,8.28e-14,2;CL:0000163,3.74e-12,9 | |||
|ontology_enrichment_development_v019=CL:0002425;8.28e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!4.74e-16!9;UBERON:0007245!4.74e-16!9;UBERON:0010009!4.74e-16!9;UBERON:0010011!4.74e-16!9;UBERON:0000454!4.74e-16!9;UBERON:0002308!2.93e-11!9;UBERON:0000125!2.93e-11!9;UBERON:0003296!1.62e-10!4;UBERON:0010133!1.62e-10!4;UBERON:0001894!3.86e-10!7;UBERON:0006222!3.86e-10!7;UBERON:0001905!4.56e-10!2;UBERON:0002757!4.56e-10!2;UBERON:0010134!4.56e-10!2;UBERON:0002784!4.56e-10!2;UBERON:0005408!4.56e-10!2;UBERON:0001899!4.56e-10!2;UBERON:0002780!7.56e-10!41;UBERON:0001890!7.56e-10!41;UBERON:0006240!7.56e-10!41;UBERON:0000369!8.44e-10!4;UBERON:0002435!8.44e-10!4;UBERON:0000204!8.44e-10!4;UBERON:0010082!8.44e-10!4;UBERON:0003080!1.44e-09!42;UBERON:0001876!1.53e-09!2;UBERON:0009663!1.62e-09!7;UBERON:0000349!6.17e-08!5;UBERON:0001049!6.87e-08!57;UBERON:0005068!6.87e-08!57;UBERON:0006241!6.87e-08!57;UBERON:0007135!6.87e-08!57;UBERON:0002616!1.51e-07!59;UBERON:0000955!3.70e-07!69;UBERON:0006238!3.70e-07!69 | |ontology_enrichment_uberon=UBERON:0002420!4.74e-16!9;UBERON:0007245!4.74e-16!9;UBERON:0010009!4.74e-16!9;UBERON:0010011!4.74e-16!9;UBERON:0000454!4.74e-16!9;UBERON:0002308!2.93e-11!9;UBERON:0000125!2.93e-11!9;UBERON:0003296!1.62e-10!4;UBERON:0010133!1.62e-10!4;UBERON:0001894!3.86e-10!7;UBERON:0006222!3.86e-10!7;UBERON:0001905!4.56e-10!2;UBERON:0002757!4.56e-10!2;UBERON:0010134!4.56e-10!2;UBERON:0002784!4.56e-10!2;UBERON:0005408!4.56e-10!2;UBERON:0001899!4.56e-10!2;UBERON:0002780!7.56e-10!41;UBERON:0001890!7.56e-10!41;UBERON:0006240!7.56e-10!41;UBERON:0000369!8.44e-10!4;UBERON:0002435!8.44e-10!4;UBERON:0000204!8.44e-10!4;UBERON:0010082!8.44e-10!4;UBERON:0003080!1.44e-09!42;UBERON:0001876!1.53e-09!2;UBERON:0009663!1.62e-09!7;UBERON:0000349!6.17e-08!5;UBERON:0001049!6.87e-08!57;UBERON:0005068!6.87e-08!57;UBERON:0006241!6.87e-08!57;UBERON:0007135!6.87e-08!57;UBERON:0002616!1.51e-07!59;UBERON:0000955!3.70e-07!69;UBERON:0006238!3.70e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-50;2!UBERON:0002757;5.15e-50;2!UBERON:0010134;5.15e-50;2!UBERON:0005408;5.15e-50;2!UBERON:0001899;5.15e-50;2!UBERON:0003296;1.26e-25;4!UBERON:0010133;1.26e-25;4!UBERON:0002784;1.26e-25;4!UBERON:0001894;4.07e-15;7!UBERON:0002346;1.80e-07;4!UBERON:0000923;1.80e-07;4!UBERON:0010316;1.80e-07;4!UBERON:0005291;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.61e-50,2;UBERON:0002757,6.61e-50,2;UBERON:0010134,6.61e-50,2;UBERON:0005408,6.61e-50,2;UBERON:0001899,6.61e-50,2;UBERON:0003296,1.43e-25,4;UBERON:0010133,1.43e-25,4;UBERON:0002784,1.43e-25,4;UBERON:0001894,4.37e-15,7;UBERON:0006222,4.37e-15,7;UBERON:0002370,1.49e-07,4;UBERON:0005058,1.49e-07,4;UBERON:0009113,1.49e-07,4;UBERON:0003295,1.49e-07,4;UBERON:0005562,1.49e-07,4;UBERON:0002368,4.88e-07,35 | |||
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| ||
|short_description=p@chr6:130088321..130088346,- | |short_description=p@chr6:130088321..130088346,- | ||
}} | }} |
Latest revision as of 19:20, 30 July 2015
Short description: | p@chr6:130088321..130088346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:130088321..130088346, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.58e-26 | 1 |
immature NK T cell | 3.58e-26 | 1 |
effector T cell | 3.58e-26 | 1 |
mature NK T cell | 3.58e-26 | 1 |
immature NK T cell stage IV | 3.58e-26 | 1 |
immature NK T cell stage I | 3.58e-26 | 1 |
immature NK T cell stage II | 3.58e-26 | 1 |
immature NK T cell stage III | 3.58e-26 | 1 |
mast cell | 4.92e-21 | 5 |
basophil mast progenitor cell | 4.92e-21 | 5 |
thymocyte | 8.28e-14 | 2 |
double negative thymocyte | 8.28e-14 | 2 |
double-positive, alpha-beta thymocyte | 8.28e-14 | 2 |
DN4 thymocyte | 8.28e-14 | 2 |
DN1 thymic pro-T cell | 8.28e-14 | 2 |
DN2 thymocyte | 8.28e-14 | 2 |
DN3 thymocyte | 8.28e-14 | 2 |
immature single positive thymocyte | 8.28e-14 | 2 |
early T lineage precursor | 8.28e-14 | 2 |
endocrine cell | 3.74e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.61e-50 | 2 |
regional part of epithalamus | 6.61e-50 | 2 |
secretory circumventricular organ | 6.61e-50 | 2 |
circumventricular organ | 6.61e-50 | 2 |
epithalamus | 6.61e-50 | 2 |
gland of diencephalon | 1.43e-25 | 4 |
neuroendocrine gland | 1.43e-25 | 4 |
regional part of diencephalon | 1.43e-25 | 4 |
diencephalon | 4.37e-15 | 7 |
future diencephalon | 4.37e-15 | 7 |
thymus | 1.49e-07 | 4 |
hemolymphoid system gland | 1.49e-07 | 4 |
thymic region | 1.49e-07 | 4 |
pharyngeal gland | 1.49e-07 | 4 |
thymus primordium | 1.49e-07 | 4 |
endocrine gland | 4.88e-07 | 35 |