FFCP PHASE1:Hg19::chr6:159084464..159084482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_AK055750_5end | |association_with_transcript=29bp_to_AK055750_5end | ||
|cluster_id=chr6:159084464..159084482,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_12_at_SYTL3_5end | |description=CAGE_peak_12_at_SYTL3_5end | ||
|id=chr6:159084464..159084482,+ | |id=chr6:159084464..159084482,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.38e-18!5;CL:0000457!5.38e-18!5;CL:0002191!5.38e-18!5;CL:0000097!5.38e-18!5;CL:0000831!5.38e-18!5;CL:0002028!5.38e-18!5;CL:0000163!4.68e-10!9 | |ontology_enrichment_celltype=CL:0002274!5.38e-18!5;CL:0000457!5.38e-18!5;CL:0002191!5.38e-18!5;CL:0000097!5.38e-18!5;CL:0000831!5.38e-18!5;CL:0002028!5.38e-18!5;CL:0000163!4.68e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.55e-27;5!CL:0000163;1.31e-15;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.55e-27,5;CL:0002028,3.55e-27,5;CL:0000163,1.31e-15,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!7.75e-18!3;UBERON:0004054!7.75e-18!3;UBERON:0005904!1.65e-13!4;UBERON:0000341!1.44e-12!2;UBERON:0008814!4.05e-09!15;UBERON:0001042!9.48e-09!10;UBERON:0009145!9.48e-09!10;UBERON:0001723!2.46e-08!3;UBERON:0001033!2.46e-08!3;UBERON:0010056!2.46e-08!3;UBERON:0006562!5.81e-08!11;UBERON:0007023!1.86e-07!115;UBERON:0001000!3.73e-07!1;UBERON:0005352!3.73e-07!1;UBERON:0001301!4.43e-07!1;UBERON:0001736!5.26e-07!1;UBERON:0006298!5.26e-07!1;UBERON:0000998!5.57e-07!1;UBERON:0006868!5.57e-07!1 | |ontology_enrichment_uberon=UBERON:0006947!7.75e-18!3;UBERON:0004054!7.75e-18!3;UBERON:0005904!1.65e-13!4;UBERON:0000341!1.44e-12!2;UBERON:0008814!4.05e-09!15;UBERON:0001042!9.48e-09!10;UBERON:0009145!9.48e-09!10;UBERON:0001723!2.46e-08!3;UBERON:0001033!2.46e-08!3;UBERON:0010056!2.46e-08!3;UBERON:0006562!5.81e-08!11;UBERON:0007023!1.86e-07!115;UBERON:0001000!3.73e-07!1;UBERON:0005352!3.73e-07!1;UBERON:0001301!4.43e-07!1;UBERON:0001736!5.26e-07!1;UBERON:0006298!5.26e-07!1;UBERON:0000998!5.57e-07!1;UBERON:0006868!5.57e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;8.34e-34;1!UBERON:0005352;8.34e-34;1!UBERON:0002046;1.59e-27;5!UBERON:0000341;8.34e-18;2!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0000974;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.06e-34,1;UBERON:0005352,7.06e-34,1;UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0000341,9.07e-18,2;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0005904,1.57e-09,4;UBERON:0008814,2.09e-08,18 | |||
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|short_description=p12@SYTL3 | |short_description=p12@SYTL3 | ||
}} | }} |
Latest revision as of 12:15, 16 September 2015
Short description: | p12@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SYTL3_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 29bp_to_AK055750_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.55e-27 | 5 |
basophil mast progenitor cell | 3.55e-27 | 5 |
endocrine cell | 1.31e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 7.06e-34 | 1 |
spermatic cord | 7.06e-34 | 1 |
thyroid gland | 1.59e-27 | 5 |
pharyngeal pouch | 1.59e-27 | 5 |
thyroid diverticulum | 1.59e-27 | 5 |
pharyngeal pouch 2 | 1.59e-27 | 5 |
thyroid primordium | 1.59e-27 | 5 |
throat | 9.07e-18 | 2 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
duct of male reproductive system | 1.57e-09 | 4 |
pharyngeal arch system | 2.09e-08 | 18 |