FFCP PHASE1:Hg19::chr16:67022476..67022498,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:67022476..67022498,+
|short_description=p4@CES4A
|description=CAGE_peak_4_at_CES4A_5end
|association_with_transcript=0bp_to_NM_173815_5end
|EntrezGene=28...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283848 | |EntrezGene=283848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26741 | |HGNC=26741 | ||
|TSSclassifier=strong | |||
|UniProt=Q5XG92 | |UniProt=Q5XG92 | ||
|association_with_transcript=0bp_to_NM_173815_5end | |||
|cluster_id=chr16:67022476..67022498,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_4_at_CES4A_5end | |||
|id=chr16:67022476..67022498,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;8.94e-20;1!CL:0000911;8.94e-20;1!CL:0000814;8.94e-20;1!CL:0000182;5.39e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,8.95e-20,1;CL:0000914,8.95e-20,1;CL:0000911,8.95e-20,1;CL:0000814,8.95e-20,1;CL:0002042,8.95e-20,1;CL:0002039,8.95e-20,1;CL:0002040,8.95e-20,1;CL:0002041,8.95e-20,1;CL:0000893,1.43e-10,2;CL:0002489,1.43e-10,2;CL:0000809,1.43e-10,2;CL:0000808,1.43e-10,2;CL:0000894,1.43e-10,2;CL:0000806,1.43e-10,2;CL:0000807,1.43e-10,2;CL:0000805,1.43e-10,2;CL:0002425,1.43e-10,2;CL:0000182,5.15e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002425;1.43e-10;2!UBERON:0003104;6.44e-10;31!UBERON:0003918;3.89e-08;10!UBERON:0007687;3.89e-08;10!UBERON:0004161;1.78e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.97e-19;1!DOID:0060061;2.97e-19;1!DOID:8691;2.97e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.71e-19,1;DOID:0060061,2.71e-19,1;DOID:8691,2.71e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002530!2.17e-11!59;UBERON:0002368!2.77e-10!35;UBERON:0003929!2.26e-09!54;UBERON:0000007!1.97e-08!2;UBERON:0002417!3.37e-08!61;UBERON:0000916!3.37e-08!61;UBERON:0005172!4.33e-08!55;UBERON:0005173!4.33e-08!55;UBERON:0000341!1.06e-07!2;UBERON:0000949!1.77e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.52e-15;19!UBERON:0006925;1.52e-15;19!UBERON:0002368;1.03e-12;33!UBERON:0002423;6.66e-12;25!UBERON:0000007;1.72e-10;2!UBERON:0002365;1.40e-09;31!UBERON:0002330;1.40e-09;31!UBERON:0005172;1.60e-09;52!UBERON:0005173;1.60e-09;52!UBERON:0000949;3.90e-08;43!UBERON:0002417;1.49e-07;58!UBERON:0000916;1.49e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,1.48e-18,35;UBERON:0002107,1.39e-15,19;UBERON:0006925,1.39e-15,19;UBERON:0008836,1.39e-15,19;UBERON:0000949,2.04e-14,45;UBERON:0008835,1.64e-13,22;UBERON:0003894,1.64e-13,22;UBERON:0009854,6.11e-13,23;UBERON:0007499,6.21e-12,25;UBERON:0009497,6.21e-12,25;UBERON:0000015,6.21e-12,25;UBERON:0002423,6.21e-12,25;UBERON:0006235,6.21e-12,25;UBERON:0004161,6.21e-12,25;UBERON:0005172,6.32e-12,54;UBERON:0005173,6.32e-12,54;UBERON:0009856,1.73e-11,26;UBERON:0002530,5.76e-11,59;UBERON:0002417,1.02e-10,60;UBERON:0000916,1.02e-10,60;UBERON:0000007,1.72e-10,2;UBERON:0002365,1.10e-09,31;UBERON:0002330,1.10e-09,31;UBERON:0003929,1.72e-08,54 | |||
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| ||
|short_description=p4@CES4A | |||
}} | }} |
Latest revision as of 09:17, 17 September 2015
Short description: | p4@CES4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CES4A_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | 0bp_to_NM_173815_5end |
EntrezGene: | CES4A |
HGNC: | 26741 |
UniProt: | Q5XG92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 8.95e-20 | 1 |
immature NK T cell | 8.95e-20 | 1 |
effector T cell | 8.95e-20 | 1 |
mature NK T cell | 8.95e-20 | 1 |
immature NK T cell stage IV | 8.95e-20 | 1 |
immature NK T cell stage I | 8.95e-20 | 1 |
immature NK T cell stage II | 8.95e-20 | 1 |
immature NK T cell stage III | 8.95e-20 | 1 |
thymocyte | 1.43e-10 | 2 |
double negative thymocyte | 1.43e-10 | 2 |
double-positive, alpha-beta thymocyte | 1.43e-10 | 2 |
DN4 thymocyte | 1.43e-10 | 2 |
DN1 thymic pro-T cell | 1.43e-10 | 2 |
DN2 thymocyte | 1.43e-10 | 2 |
DN3 thymocyte | 1.43e-10 | 2 |
immature single positive thymocyte | 1.43e-10 | 2 |
early T lineage precursor | 1.43e-10 | 2 |
hepatocyte | 5.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 1.48e-18 | 35 |
liver | 1.39e-15 | 19 |
digestive gland | 1.39e-15 | 19 |
liver bud | 1.39e-15 | 19 |
endocrine system | 2.04e-14 | 45 |
hepatic diverticulum | 1.64e-13 | 22 |
liver primordium | 1.64e-13 | 22 |
digestive tract diverticulum | 6.11e-13 | 23 |
epithelial sac | 6.21e-12 | 25 |
epithelium of foregut-midgut junction | 6.21e-12 | 25 |
anatomical boundary | 6.21e-12 | 25 |
hepatobiliary system | 6.21e-12 | 25 |
foregut-midgut junction | 6.21e-12 | 25 |
septum transversum | 6.21e-12 | 25 |
abdomen element | 6.32e-12 | 54 |
abdominal segment element | 6.32e-12 | 54 |
sac | 1.73e-11 | 26 |
gland | 5.76e-11 | 59 |
abdominal segment of trunk | 1.02e-10 | 60 |
abdomen | 1.02e-10 | 60 |
pituitary gland | 1.72e-10 | 2 |
exocrine gland | 1.10e-09 | 31 |
exocrine system | 1.10e-09 | 31 |
gut epithelium | 1.72e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.71e-19 | 1 |
cutaneous T cell lymphoma | 2.71e-19 | 1 |
mycosis fungoides | 2.71e-19 | 1 |