FFCP PHASE1:Hg19::chr7:71868743..71868773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83698 | |EntrezGene=83698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13248 | |HGNC=13248 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXU9 | |UniProt=Q9BXU9 | ||
|association_with_transcript=-389bp_to_ENST00000412588_5end | |association_with_transcript=-389bp_to_ENST00000412588_5end | ||
|cluster_id=chr7:71868743..71868773,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_CALN1_5end | |description=CAGE_peak_9_at_CALN1_5end | ||
|id=chr7:71868743..71868773,- | |id=chr7:71868743..71868773,- | ||
|ontology_enrichment_celltype=CL:0002057!1.93e-80!42;CL:0000860!1.49e-74!45;CL:0002009!1.22e-51!65;CL:0002194!4.33e-50!63;CL:0000576!4.33e-50!63;CL:0000040!4.33e-50!63;CL:0000559!4.33e-50!63;CL:0000557!5.02e-50!71;CL:0000766!1.05e-49!76;CL:0000738!3.06e-47!140;CL:0000839!2.23e-44!70;CL:0002087!7.96e-44!119;CL:0000037!8.49e-43!172;CL:0000566!8.49e-43!172;CL:0000988!6.79e-40!182;CL:0000763!7.71e-38!112;CL:0000049!7.71e-38!112;CL:0002031!3.32e-37!124;CL:0002032!7.74e-35!165;CL:0000837!7.74e-35!165;CL:0000134!3.24e-15!358;CL:0002320!1.01e-14!365;CL:0000219!5.49e-13!390;CL:0000034!1.06e-12!444;CL:0000767!1.19e-12!3;CL:0000842!2.44e-11!3;CL:0000048!6.59e-11!430;CL:0002393!8.64e-11!9;CL:0002397!8.64e-11!9;CL:0000723!1.30e-10!436;CL:0000224!1.27e-08!4 | |ontology_enrichment_celltype=CL:0002057!1.93e-80!42;CL:0000860!1.49e-74!45;CL:0002009!1.22e-51!65;CL:0002194!4.33e-50!63;CL:0000576!4.33e-50!63;CL:0000040!4.33e-50!63;CL:0000559!4.33e-50!63;CL:0000557!5.02e-50!71;CL:0000766!1.05e-49!76;CL:0000738!3.06e-47!140;CL:0000839!2.23e-44!70;CL:0002087!7.96e-44!119;CL:0000037!8.49e-43!172;CL:0000566!8.49e-43!172;CL:0000988!6.79e-40!182;CL:0000763!7.71e-38!112;CL:0000049!7.71e-38!112;CL:0002031!3.32e-37!124;CL:0002032!7.74e-35!165;CL:0000837!7.74e-35!165;CL:0000134!3.24e-15!358;CL:0002320!1.01e-14!365;CL:0000219!5.49e-13!390;CL:0000034!1.06e-12!444;CL:0000767!1.19e-12!3;CL:0000842!2.44e-11!3;CL:0000048!6.59e-11!430;CL:0002393!8.64e-11!9;CL:0002397!8.64e-11!9;CL:0000723!1.30e-10!436;CL:0000224!1.27e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-28;33!CL:0002057;1.55e-28;33!CL:0000473;7.53e-22;39!CL:0000234;7.53e-22;39!CL:0000576;1.19e-20;48!CL:0002393;1.31e-16;6!CL:0002397;1.31e-16;6!CL:0000766;1.86e-15;69!CL:0000767;8.08e-15;3!CL:0002032;1.25e-11;1!CL:0000037;1.25e-11;1!CL:0001024;1.25e-11;1!CL:0000557;1.25e-11;1!CL:0000763;2.32e-10;100!CL:0002087;3.38e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.30e-40,42;CL:0002057,2.30e-40,42;CL:0000473,4.23e-35,48;CL:0000234,4.23e-35,48;CL:0000766,3.32e-30,72;CL:0000557,3.20e-28,67;CL:0002194,1.01e-27,59;CL:0000576,1.01e-27,59;CL:0000040,1.01e-27,59;CL:0000559,1.01e-27,59;CL:0002009,9.06e-27,61;CL:0000839,1.23e-24,66;CL:0000763,2.15e-22,108;CL:0000049,2.15e-22,108;CL:0000037,9.68e-18,168;CL:0000738,2.09e-17,136;CL:0000988,1.01e-16,177;CL:0002032,2.04e-16,161;CL:0000837,2.04e-16,161;CL:0002087,9.26e-16,115;CL:0002031,5.05e-15,120;CL:0000767,7.02e-15,3;CL:0001024,1.47e-11,1;CL:0002393,2.99e-11,9;CL:0002397,2.99e-11,9;CL:0000134,4.18e-07,354;CL:0002320,6.47e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.55e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-49!80;UBERON:0001474!1.07e-45!86;UBERON:0002390!1.14e-44!102;UBERON:0003061!1.14e-44!102;UBERON:0002193!6.50e-40!112;UBERON:0004765!1.03e-37!101;UBERON:0001434!1.03e-37!101;UBERON:0002405!3.98e-32!115;UBERON:0002204!1.49e-19!167;UBERON:0003081!1.81e-16!216;UBERON:0002384!4.73e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!1.02e-49!80;UBERON:0001474!1.07e-45!86;UBERON:0002390!1.14e-44!102;UBERON:0003061!1.14e-44!102;UBERON:0002193!6.50e-40!112;UBERON:0004765!1.03e-37!101;UBERON:0001434!1.03e-37!101;UBERON:0002405!3.98e-32!115;UBERON:0002204!1.49e-19!167;UBERON:0003081!1.81e-16!216;UBERON:0002384!4.73e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-28,76;UBERON:0001474,2.99e-26,82;UBERON:0004765,9.26e-24,90;UBERON:0002405,6.20e-23,93;UBERON:0002390,1.14e-21,98;UBERON:0003061,1.14e-21,98;UBERON:0001434,3.38e-21,100;UBERON:0002193,1.74e-19,108;UBERON:0002204,7.21e-12,167;UBERON:0003081,2.26e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0.786728553697808,1.53531759238885,2.01260960310899,0,0,0,0,0,1.17440175733939,5.53995408531877,11.2304890583279,7.16135873362311,0,0,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,0,1.1507695692886,0.512321413058201,0.47296445977717,13.7898272294647,6.45484683583826,1.35426486594342,0.564727018627814,0,0.224723484445085,11.6311879100943,11.2325159476633,12.1474053901818,0,0,0,1.16083695451434,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0.211255286311942,0,0.838634582033504,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9214516591929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0.786728553697808,1.53531759238885,2.01260960310899,0,0,0,0,0,1.17440175733939,5.53995408531877,11.2304890583279,7.16135873362311,0,0,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,0,1.1507695692886,0.512321413058201,0.47296445977717,13.7898272294647,6.45484683583826,1.35426486594342,0.564727018627814,0,0.224723484445085,11.6311879100943,11.2325159476633,12.1474053901818,0,0,0,1.16083695451434,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0.211255286311942,0,0.838634582033504,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9214516591929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@CALN1 | |short_description=p9@CALN1 | ||
}} | }} |
Latest revision as of 08:53, 19 September 2015
Short description: | p9@CALN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CALN1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -389bp_to_ENST00000412588_5end |
EntrezGene: | CALN1 |
HGNC: | 13248 |
UniProt: | Q9BXU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.30e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.30e-40 | 42 |
defensive cell | 4.23e-35 | 48 |
phagocyte | 4.23e-35 | 48 |
myeloid leukocyte | 3.32e-30 | 72 |
granulocyte monocyte progenitor cell | 3.20e-28 | 67 |
monopoietic cell | 1.01e-27 | 59 |
monocyte | 1.01e-27 | 59 |
monoblast | 1.01e-27 | 59 |
promonocyte | 1.01e-27 | 59 |
macrophage dendritic cell progenitor | 9.06e-27 | 61 |
myeloid lineage restricted progenitor cell | 1.23e-24 | 66 |
myeloid cell | 2.15e-22 | 108 |
common myeloid progenitor | 2.15e-22 | 108 |
hematopoietic stem cell | 9.68e-18 | 168 |
leukocyte | 2.09e-17 | 136 |
hematopoietic cell | 1.01e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.04e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-16 | 161 |
nongranular leukocyte | 9.26e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.05e-15 | 120 |
basophil | 7.02e-15 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.47e-11 | 1 |
intermediate monocyte | 2.99e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.99e-11 | 9 |
mesenchymal cell | 4.18e-07 | 354 |
connective tissue cell | 6.47e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.85e-28 | 76 |
bone element | 2.99e-26 | 82 |
skeletal element | 9.26e-24 | 90 |
immune system | 6.20e-23 | 93 |
hematopoietic system | 1.14e-21 | 98 |
blood island | 1.14e-21 | 98 |
skeletal system | 3.38e-21 | 100 |
hemolymphoid system | 1.74e-19 | 108 |
musculoskeletal system | 7.21e-12 | 167 |
lateral plate mesoderm | 2.26e-09 | 203 |