FFCP PHASE1:Hg19::chr16:81478558..81478647,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:81478558..81478647,+
|short_description=p1@CMIP
|description=CAGE_peak_1_at_CMIP_5end
|association_with_transcript=-127bp_to_ENST00000537098,NM_198390,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80790 | |EntrezGene=80790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |HGNC=24319 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY22 | |UniProt=Q8IY22 | ||
|association_with_transcript=-127bp_to_ENST00000537098,NM_198390,uc002fgp.2_5end | |||
|cluster_id=chr16:81478558..81478647,+ | |||
|description=CAGE_peak_1_at_CMIP_5end | |||
|id=chr16:81478558..81478647,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.66e-26!76;CL:0002057!1.77e-24!42;CL:0000557!5.58e-23!71;CL:0000763!7.40e-23!112;CL:0000049!7.40e-23!112;CL:0002009!9.69e-22!65;CL:0000860!3.34e-21!45;CL:0002194!9.43e-21!63;CL:0000576!9.43e-21!63;CL:0000040!9.43e-21!63;CL:0000559!9.43e-21!63;CL:0000839!1.92e-19!70;CL:0000738!1.23e-15!140;CL:0000037!1.16e-13!172;CL:0000566!1.16e-13!172;CL:0002032!1.29e-13!165;CL:0000837!1.29e-13!165;CL:0000988!5.41e-11!182;CL:0002087!2.21e-10!119;CL:0002031!3.20e-10!124;CL:0000066!1.28e-09!254;CL:0002368!1.16e-07!13;CL:0000076!1.51e-07!62;CL:0000115!7.94e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.60e-19;33!CL:0002057;4.60e-19;33!CL:0000473;6.70e-17;39!CL:0000234;6.70e-17;39!CL:0000576;5.74e-16;48!CL:0000766;6.32e-13;69!CL:0000763;6.34e-08;100!CL:0002368;1.10e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.00e-29,72;CL:0000557,2.14e-26,67;CL:0000473,2.08e-25,48;CL:0000234,2.08e-25,48;CL:0000763,2.47e-25,108;CL:0000049,2.47e-25,108;CL:0002009,3.04e-25,61;CL:0000860,1.77e-24,42;CL:0002057,1.77e-24,42;CL:0002194,3.21e-24,59;CL:0000576,3.21e-24,59;CL:0000040,3.21e-24,59;CL:0000559,3.21e-24,59;CL:0000839,1.64e-22,66;CL:0000738,2.60e-17,136;CL:0000037,5.08e-15,168;CL:0002032,5.28e-15,161;CL:0000837,5.28e-15,161;CL:0000988,4.02e-12,177;CL:0002087,8.57e-12,115;CL:0002031,1.39e-11,120;CL:0000066,6.58e-10,253;CL:0002368,1.16e-07,13;CL:0000223,3.98e-07,58;CL:0000076,4.85e-07,63;CL:0000115,9.00e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-18;42!CL:0000049;5.59e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.42e-19!112;UBERON:0002390!4.51e-18!102;UBERON:0003061!4.51e-18!102;UBERON:0002405!1.40e-17!115;UBERON:0002371!2.27e-17!80;UBERON:0003081!2.76e-14!216;UBERON:0001474!5.24e-14!86;UBERON:0004765!4.73e-10!101;UBERON:0001434!4.73e-10!101;UBERON:0000062!9.06e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.01e-21,108;UBERON:0002390,2.57e-20,98;UBERON:0003061,2.57e-20,98;UBERON:0002371,5.95e-20,76;UBERON:0002405,7.00e-20,93;UBERON:0001474,3.98e-16,82;UBERON:0003081,5.65e-14,203;UBERON:0004765,1.32e-13,90;UBERON:0001434,3.58e-10,100 | |||
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151037 | ||
|short_description=p1@CMIP | |||
}} | }} |
Latest revision as of 01:00, 18 September 2015
Short description: | p1@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMIP_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_ENST00000537098, NM_198390, uc002fgp.2_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.00e-29 | 72 |
granulocyte monocyte progenitor cell | 2.14e-26 | 67 |
defensive cell | 2.08e-25 | 48 |
phagocyte | 2.08e-25 | 48 |
myeloid cell | 2.47e-25 | 108 |
common myeloid progenitor | 2.47e-25 | 108 |
macrophage dendritic cell progenitor | 3.04e-25 | 61 |
classical monocyte | 1.77e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.77e-24 | 42 |
monopoietic cell | 3.21e-24 | 59 |
monocyte | 3.21e-24 | 59 |
monoblast | 3.21e-24 | 59 |
promonocyte | 3.21e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.64e-22 | 66 |
leukocyte | 2.60e-17 | 136 |
hematopoietic stem cell | 5.08e-15 | 168 |
hematopoietic oligopotent progenitor cell | 5.28e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.28e-15 | 161 |
hematopoietic cell | 4.02e-12 | 177 |
nongranular leukocyte | 8.57e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.39e-11 | 120 |
epithelial cell | 6.58e-10 | 253 |
respiratory epithelial cell | 1.16e-07 | 13 |
endodermal cell | 3.98e-07 | 58 |
squamous epithelial cell | 4.85e-07 | 63 |
endothelial cell | 9.00e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.01e-21 | 108 |
hematopoietic system | 2.57e-20 | 98 |
blood island | 2.57e-20 | 98 |
bone marrow | 5.95e-20 | 76 |
immune system | 7.00e-20 | 93 |
bone element | 3.98e-16 | 82 |
lateral plate mesoderm | 5.65e-14 | 203 |
skeletal element | 1.32e-13 | 90 |
skeletal system | 3.58e-10 | 100 |