FFCP PHASE1:Hg19::chrX:109602067..109602082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57529 | |EntrezGene=57529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29245 | |HGNC=29245 | ||
|TSSclassifier=strong | |||
|UniProt=E5RKA1 | |UniProt=E5RKA1 | ||
|association_with_transcript=23bp_to_ENST00000520821,uc011msr.1_5end | |association_with_transcript=23bp_to_ENST00000520821,uc011msr.1_5end | ||
|cluster_id=chrX:109602067..109602082,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_RGAG1_5end | |description=CAGE_peak_1_at_RGAG1_5end | ||
|id=chrX:109602067..109602082,+ | |id=chrX:109602067..109602082,+ | ||
|ontology_enrichment_celltype=CL:0000746!6.88e-07!3;CL:0000513!6.88e-07!3 | |ontology_enrichment_celltype=CL:0000746!6.88e-07!3;CL:0000513!6.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.12e-17;3!CL:0000737;1.29e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.12e-17,3;CL:0000513,1.12e-17,3;CL:0000737,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!CL:0000513;1.12e-17;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002135!7.37e-18!1;UBERON:0002133!1.33e-09!2;UBERON:0000473!1.99e-09!8;UBERON:0000991!9.29e-08!21;UBERON:0009196!9.29e-08!21;UBERON:0009117!9.29e-08!21;UBERON:0005564!9.29e-08!21;UBERON:0004176!1.98e-07!22;UBERON:0003135!4.30e-07!11;UBERON:0000948!7.62e-07!24;UBERON:0005498!7.62e-07!24;UBERON:0004140!7.62e-07!24;UBERON:0009881!7.62e-07!24;UBERON:0004141!7.62e-07!24;UBERON:0003084!7.62e-07!24;UBERON:0007005!7.62e-07!24;UBERON:0004139!7.62e-07!24;UBERON:0004291!7.62e-07!24;UBERON:0003978!8.15e-07!3;UBERON:0009751!8.15e-07!3;UBERON:0000946!8.15e-07!3;UBERON:0002523!8.15e-07!3;UBERON:0005983!8.15e-07!3;UBERON:0002165!8.15e-07!3;UBERON:0002062!8.15e-07!3;UBERON:0007280!8.15e-07!3;UBERON:0002110!8.62e-07!3;UBERON:0006242!8.62e-07!3 | |ontology_enrichment_uberon=UBERON:0002135!7.37e-18!1;UBERON:0002133!1.33e-09!2;UBERON:0000473!1.99e-09!8;UBERON:0000991!9.29e-08!21;UBERON:0009196!9.29e-08!21;UBERON:0009117!9.29e-08!21;UBERON:0005564!9.29e-08!21;UBERON:0004176!1.98e-07!22;UBERON:0003135!4.30e-07!11;UBERON:0000948!7.62e-07!24;UBERON:0005498!7.62e-07!24;UBERON:0004140!7.62e-07!24;UBERON:0009881!7.62e-07!24;UBERON:0004141!7.62e-07!24;UBERON:0003084!7.62e-07!24;UBERON:0007005!7.62e-07!24;UBERON:0004139!7.62e-07!24;UBERON:0004291!7.62e-07!24;UBERON:0003978!8.15e-07!3;UBERON:0009751!8.15e-07!3;UBERON:0000946!8.15e-07!3;UBERON:0002523!8.15e-07!3;UBERON:0005983!8.15e-07!3;UBERON:0002165!8.15e-07!3;UBERON:0002062!8.15e-07!3;UBERON:0007280!8.15e-07!3;UBERON:0002110!8.62e-07!3;UBERON:0006242!8.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p1@RGAG1 | |short_description=p1@RGAG1 | ||
}} | }} |
Latest revision as of 01:00, 19 September 2015
Short description: | p1@RGAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGAG1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 23bp_to_ENST00000520821, uc011msr.1_5end |
EntrezGene: | RGAG1 |
HGNC: | 29245 |
UniProt: | E5RKA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.12e-17 | 3 |
cardiac muscle myoblast | 1.12e-17 | 3 |
striated muscle cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |