FFCP PHASE1:Hg19::chr1:158978745..158978754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-146bp_to_ENST00000447473_5end | |association_with_transcript=-146bp_to_ENST00000447473_5end | ||
|cluster_id=chr1:158978745..158978754,+ | |||
|description=CAGE_peak_27_at_IFI16_5end | |description=CAGE_peak_27_at_IFI16_5end | ||
|id=chr1:158978745..158978754,+ | |id=chr1:158978745..158978754,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.75e-19!182;CL:0002032!2.85e-17!165;CL:0000837!2.85e-17!165;CL:0000037!3.75e-17!172;CL:0000566!3.75e-17!172;CL:0000542!4.10e-16!53;CL:0000051!4.10e-16!53;CL:0000945!1.05e-15!24;CL:0000826!1.05e-15!24;CL:0000838!1.06e-14!52;CL:0002087!1.47e-14!119;CL:0002031!1.95e-14!124;CL:0000738!8.04e-14!140;CL:0000875!1.63e-08!3;CL:0002396!1.63e-08!3;CL:0000817!5.54e-08!3;CL:0000080!1.30e-07!6;CL:0000134!4.81e-07!358 | |ontology_enrichment_celltype=CL:0000988!5.75e-19!182;CL:0002032!2.85e-17!165;CL:0000837!2.85e-17!165;CL:0000037!3.75e-17!172;CL:0000566!3.75e-17!172;CL:0000542!4.10e-16!53;CL:0000051!4.10e-16!53;CL:0000945!1.05e-15!24;CL:0000826!1.05e-15!24;CL:0000838!1.06e-14!52;CL:0002087!1.47e-14!119;CL:0002031!1.95e-14!124;CL:0000738!8.04e-14!140;CL:0000875!1.63e-08!3;CL:0002396!1.63e-08!3;CL:0000817!5.54e-08!3;CL:0000080!1.30e-07!6;CL:0000134!4.81e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.44e-17;24!CL:0000542;5.58e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.61e-17,24;CL:0000826,4.61e-17,24;CL:0000838,3.40e-12,52;CL:0000542,5.72e-12,53;CL:0000051,5.72e-12,53;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;5.58e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.47e-16!51;DOID:0060083!1.47e-16!51;DOID:0060058!1.79e-11!10;DOID:1240!2.67e-11!39 | |ontology_enrichment_disease=DOID:2531!1.47e-16!51;DOID:0060083!1.47e-16!51;DOID:0060058!1.79e-11!10;DOID:1240!2.67e-11!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.72e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!3.72e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.67e-11;10!UBERON:0000178;1.54e-07;15!UBERON:0000179;1.54e-07;15!UBERON:0000463;1.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.06e-11,10;UBERON:0000358,8.06e-11,10;UBERON:0000307,8.06e-11,10;UBERON:0000091,8.06e-11,10;UBERON:0000087,8.06e-11,10;UBERON:0007010,8.06e-11,10;UBERON:0007806,8.06e-11,10;UBERON:0008780,8.06e-11,10;UBERON:0005728,8.06e-11,10;UBERON:0000178,1.59e-07,15;UBERON:0000179,1.59e-07,15;UBERON:0000463,1.59e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,1.64201178899891,2.91229890860613,0,0,0,0,0,0,0.232401601740905,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,1.70692089026603,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.144269212976445,0.213425530045242,0,0.399158742865633,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.66614393599564,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,1.35920332841153,1.04421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.129177819672012,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p27@IFI16 | |short_description=p27@IFI16 | ||
}} | }} |
Latest revision as of 21:53, 17 September 2015
Short description: | p27@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_IFI16_5end |
Coexpression cluster: | NA |
Association with transcript: | -146bp_to_ENST00000447473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.61e-17 | 24 |
pro-B cell | 4.61e-17 | 24 |
lymphoid lineage restricted progenitor cell | 3.40e-12 | 52 |
lymphocyte | 5.72e-12 | 53 |
common lymphoid progenitor | 5.72e-12 | 53 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.06e-11 | 10 |
blastocyst | 8.06e-11 | 10 |
blastula | 8.06e-11 | 10 |
bilaminar disc | 8.06e-11 | 10 |
inner cell mass | 8.06e-11 | 10 |
cleaving embryo | 8.06e-11 | 10 |
connecting stalk | 8.06e-11 | 10 |
inner cell mass derived epiblast | 8.06e-11 | 10 |
extraembryonic mesoderm | 8.06e-11 | 10 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |