FFCP PHASE1:Hg19::chr20:49126881..49126936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5770 | |EntrezGene=5770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9642 | |HGNC=9642 | ||
|TSSclassifier=strong | |||
|UniProt=P18031,B4DSN5,A8K3M3 | |UniProt=P18031,B4DSN5,A8K3M3 | ||
|association_with_transcript=0bp_to_ENST00000371621,ENST00000541713,NM_002827,uc002xvl.2,uc010zys.1_5end | |association_with_transcript=0bp_to_ENST00000371621,ENST00000541713,NM_002827,uc002xvl.2,uc010zys.1_5end | ||
|cluster_id=chr20:49126881..49126936,+ | |||
|coexpression_cluster_id=C999 | |||
|description=CAGE_peak_1_at_PTPN1_5end | |description=CAGE_peak_1_at_PTPN1_5end | ||
|id=chr20:49126881..49126936,+ | |id=chr20:49126881..49126936,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.19e-38!140;CL:0000037!1.07e-28!172;CL:0000566!1.07e-28!172;CL:0002031!3.99e-27!124;CL:0002087!4.48e-27!119;CL:0000988!7.41e-27!182;CL:0002032!1.94e-26!165;CL:0000837!1.94e-26!165;CL:0000766!1.08e-23!76;CL:0002057!5.10e-22!42;CL:0000557!1.06e-19!71;CL:0000860!1.73e-19!45;CL:0000839!1.09e-17!70;CL:0002009!5.70e-17!65;CL:0002194!8.96e-17!63;CL:0000576!8.96e-17!63;CL:0000040!8.96e-17!63;CL:0000559!8.96e-17!63;CL:0000763!1.04e-16!112;CL:0000049!1.04e-16!112;CL:0000838!1.89e-09!52;CL:0000542!2.54e-09!53;CL:0000051!2.54e-09!53;CL:0000791!1.30e-07!18;CL:0000789!1.30e-07!18;CL:0002420!1.30e-07!18;CL:0002419!1.30e-07!18;CL:0000790!1.30e-07!18;CL:0000063!2.22e-07!578 | |ontology_enrichment_celltype=CL:0000738!9.19e-38!140;CL:0000037!1.07e-28!172;CL:0000566!1.07e-28!172;CL:0002031!3.99e-27!124;CL:0002087!4.48e-27!119;CL:0000988!7.41e-27!182;CL:0002032!1.94e-26!165;CL:0000837!1.94e-26!165;CL:0000766!1.08e-23!76;CL:0002057!5.10e-22!42;CL:0000557!1.06e-19!71;CL:0000860!1.73e-19!45;CL:0000839!1.09e-17!70;CL:0002009!5.70e-17!65;CL:0002194!8.96e-17!63;CL:0000576!8.96e-17!63;CL:0000040!8.96e-17!63;CL:0000559!8.96e-17!63;CL:0000763!1.04e-16!112;CL:0000049!1.04e-16!112;CL:0000838!1.89e-09!52;CL:0000542!2.54e-09!53;CL:0000051!2.54e-09!53;CL:0000791!1.30e-07!18;CL:0000789!1.30e-07!18;CL:0002420!1.30e-07!18;CL:0002419!1.30e-07!18;CL:0000790!1.30e-07!18;CL:0000063!2.22e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-18;33!CL:0002057;3.02e-18;33!CL:0000473;8.36e-15;39!CL:0000234;8.36e-15;39!CL:0000576;1.25e-12;48!CL:0000766;8.02e-12;69!CL:0002087;4.09e-10;104!CL:0000738;1.36e-08;136!CL:0000791;1.30e-07;18!CL:0000789;1.30e-07;18!CL:0002419;1.30e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.72e-40,136;CL:0000037,2.52e-30,168;CL:0002087,4.12e-29,115;CL:0002031,4.20e-29,120;CL:0000988,3.90e-28,177;CL:0002032,5.07e-28,161;CL:0000837,5.07e-28,161;CL:0000766,2.77e-26,72;CL:0000557,4.48e-22,67;CL:0000860,5.10e-22,42;CL:0002057,5.10e-22,42;CL:0000473,2.44e-21,48;CL:0000234,2.44e-21,48;CL:0000839,6.71e-20,66;CL:0002009,3.07e-19,61;CL:0002194,4.45e-19,59;CL:0000576,4.45e-19,59;CL:0000040,4.45e-19,59;CL:0000559,4.45e-19,59;CL:0000763,3.25e-18,108;CL:0000049,3.25e-18,108;CL:0000838,1.89e-09,52;CL:0000542,2.54e-09,53;CL:0000051,2.54e-09,53;CL:0000791,1.30e-07,18;CL:0000789,1.30e-07,18;CL:0002420,1.30e-07,18;CL:0002419,1.30e-07,18;CL:0000790,1.30e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-16;42!CL:0000790;1.30e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.82e-22!112;UBERON:0002390!2.23e-21!102;UBERON:0003061!2.23e-21!102;UBERON:0002405!5.41e-18!115;UBERON:0002371!1.22e-17!80;UBERON:0001474!1.46e-15!86;UBERON:0004765!5.91e-11!101;UBERON:0001434!5.91e-11!101;UBERON:0003081!1.06e-07!216 | |ontology_enrichment_uberon=UBERON:0002193!4.82e-22!112;UBERON:0002390!2.23e-21!102;UBERON:0003061!2.23e-21!102;UBERON:0002405!5.41e-18!115;UBERON:0002371!1.22e-17!80;UBERON:0001474!1.46e-15!86;UBERON:0004765!5.91e-11!101;UBERON:0001434!5.91e-11!101;UBERON:0003081!1.06e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.05e-24,108;UBERON:0002390,2.67e-23,98;UBERON:0003061,2.67e-23,98;UBERON:0002405,6.61e-22,93;UBERON:0002371,1.23e-19,76;UBERON:0001474,2.76e-17,82;UBERON:0004765,1.33e-14,90;UBERON:0001434,7.10e-11,100;UBERON:0003081,4.25e-08,203 | |||
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|short_description=p1@PTPN1 | |short_description=p1@PTPN1 | ||
}} | }} |
Latest revision as of 21:49, 16 September 2015
Short description: | p1@PTPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPN1_5end |
Coexpression cluster: | C999_CD14_Eosinophils_Mast_Neutrophils_CD19_CD8_CD4 |
Association with transcript: | 0bp_to_ENST00000371621, ENST00000541713, NM_002827, uc002xvl.2, uc010zys.1_5end |
EntrezGene: | PTPN1 |
HGNC: | 9642 |
UniProt: | P18031B4DSN5A8K3M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.05e-24 | 108 |
hematopoietic system | 2.67e-23 | 98 |
blood island | 2.67e-23 | 98 |
immune system | 6.61e-22 | 93 |
bone marrow | 1.23e-19 | 76 |
bone element | 2.76e-17 | 82 |
skeletal element | 1.33e-14 | 90 |
skeletal system | 7.10e-11 | 100 |
lateral plate mesoderm | 4.25e-08 | 203 |