FFCP PHASE1:Hg19::chr2:220309762..220309781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000409595_5end | |association_with_transcript=0bp_to_ENST00000409595_5end | ||
|cluster_id=chr2:220309762..220309781,+ | |||
|coexpression_cluster_id=C1894 | |||
|description=CAGE_peak_18_at_SPEG_5end | |description=CAGE_peak_18_at_SPEG_5end | ||
|id=chr2:220309762..220309781,+ | |id=chr2:220309762..220309781,+ | ||
|ontology_enrichment_celltype=CL:0000077!4.13e-09!19 | |ontology_enrichment_celltype=CL:0000077!4.13e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.76e-14;19!CL:0002097;1.22e-09;2!CL:0002592;6.69e-07;3!CL:0000174;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.85e-14,19;CL:0002097,1.33e-09,2;CL:0002592,6.50e-07,3;CL:0000174,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.22e-17;1!UBERON:0006965;1.22e-09;2!UBERON:0007297;1.71e-09;2 | |||
|ontology_enrichment_disease=DOID:0060084!5.14e-10!3;DOID:127!5.14e-10!3;DOID:0060072!1.37e-07!4 | |ontology_enrichment_disease=DOID:0060084!5.14e-10!3;DOID:127!5.14e-10!3;DOID:0060072!1.37e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5662;6.23e-18;1!DOID:0060084;9.64e-07;3!DOID:127;9.64e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.23e-18,1;DOID:0060084,9.12e-07,3;DOID:127,9.12e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-20!115;UBERON:0006947!7.77e-10!3;UBERON:0004054!7.77e-10!3;UBERON:0005904!1.86e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!2.40e-20!115;UBERON:0006947!7.77e-10!3;UBERON:0004054!7.77e-10!3;UBERON:0005904!1.86e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.22e-17;1!UBERON:0002146;1.22e-17;1!UBERON:0006868;1.22e-17;1!UBERON:0005623;1.22e-17;1!UBERON:0001876;1.71e-09;2!UBERON:0003498;6.69e-07;3!UBERON:0005985;6.69e-07;3!UBERON:0001621;6.69e-07;3!UBERON:0002369;7.70e-07;3!UBERON:0001235;7.70e-07;3!UBERON:0006858;7.70e-07;3!UBERON:0003978;9.64e-07;3!UBERON:0000946;9.64e-07;3!UBERON:0006947;9.64e-07;3!UBERON:0004054;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.22e-17,1;UBERON:0005623,1.22e-17,1;UBERON:0000998,1.70e-17,1;UBERON:0006868,1.70e-17,1;UBERON:0001876,1.44e-09,2;UBERON:0001621,6.50e-07,3;UBERON:0002369,8.15e-07,3;UBERON:0001235,8.15e-07,3;UBERON:0006858,8.15e-07,3;UBERON:0003978,9.64e-07,3;UBERON:0009751,9.64e-07,3;UBERON:0000946,9.64e-07,3;UBERON:0002523,9.64e-07,3;UBERON:0005983,9.64e-07,3;UBERON:0002165,9.64e-07,3;UBERON:0002062,9.64e-07,3;UBERON:0007280,9.64e-07,3 | |||
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| ||
|short_description=p18@SPEG | |short_description=p18@SPEG | ||
}} | }} |
Latest revision as of 21:20, 24 September 2015
Short description: | p18@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SPEG_5end |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | 0bp_to_ENST00000409595_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.85e-14 | 19 |
cortical cell of adrenal gland | 1.33e-09 | 2 |
smooth muscle cell of the coronary artery | 6.50e-07 | 3 |
steroid hormone secreting cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.22e-17 | 1 |
semi-lunar valve | 1.22e-17 | 1 |
seminal vesicle | 1.70e-17 | 1 |
seminal fluid secreting gland | 1.70e-17 | 1 |
amygdala | 1.44e-09 | 2 |
coronary artery | 6.50e-07 | 3 |
adrenal gland | 8.15e-07 | 3 |
adrenal cortex | 8.15e-07 | 3 |
adrenal/interrenal gland | 8.15e-07 | 3 |
valve | 9.64e-07 | 3 |
cardiac mesenchyme | 9.64e-07 | 3 |
cardial valve | 9.64e-07 | 3 |
tunica intima | 9.64e-07 | 3 |
heart layer | 9.64e-07 | 3 |
endocardium | 9.64e-07 | 3 |
endocardial cushion | 9.64e-07 | 3 |
presumptive endocardium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.23e-18 | 1 |
cell type benign neoplasm | 9.12e-07 | 3 |
leiomyoma | 9.12e-07 | 3 |