FFCP PHASE1:Hg19::chr17:55522578..55522616,+: Difference between revisions
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|id=chr17:55522578..55522616,+
|short_description=p@chr17:55522578..55522616,+
|description=CAGE_peak_at_chr17:55522578..55522616,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:55522578..55522616,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr17:55522578..55522616,+ | |||
|id=chr17:55522578..55522616,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.24e-24;19!CL:0002097;1.15e-15;2!CL:0000174;6.73e-11;3!CL:0002541;1.04e-10;3!CL:0002577;1.04e-10;3!CL:0000349;6.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.17e-24,19;CL:0002097,1.15e-15,2;CL:0000174,6.73e-11,3;CL:0002577,8.99e-11,3;CL:0002541,1.20e-10,3;CL:0000213,2.42e-08,58;CL:0000215,2.42e-08,58;CL:0000076,1.03e-07,63;CL:0000349,6.77e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.59e-07!239;DOID:162!3.73e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.47e-23!9;UBERON:0001557!8.28e-13!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;6.73e-11;3!UBERON:0001235;6.73e-11;3!UBERON:0006858;6.73e-11;3!UBERON:0003124;1.04e-10;3!UBERON:0000920;1.04e-10;3!UBERON:0001987;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.73e-17,7;UBERON:0002369,6.73e-11,3;UBERON:0001235,6.73e-11,3;UBERON:0006858,6.73e-11,3;UBERON:0000920,1.20e-10,3;UBERON:0005631,4.95e-09,14;UBERON:0000158,4.95e-09,14;UBERON:0001987,2.11e-08,4;UBERON:0004340,2.11e-08,4 | |||
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| ||
|short_description=p@chr17:55522578..55522616,+ | |||
}} | }} |
Latest revision as of 19:10, 25 July 2015
Short description: | p@chr17:55522578..55522616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55522578..55522616, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.17e-24 | 19 |
cortical cell of adrenal gland | 1.15e-15 | 2 |
steroid hormone secreting cell | 6.73e-11 | 3 |
placental epithelial cell | 8.99e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
lining cell | 2.42e-08 | 58 |
barrier cell | 2.42e-08 | 58 |
squamous epithelial cell | 1.03e-07 | 63 |
extraembryonic cell | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 4.73e-17 | 7 |
adrenal gland | 6.73e-11 | 3 |
adrenal cortex | 6.73e-11 | 3 |
adrenal/interrenal gland | 6.73e-11 | 3 |
egg chorion | 1.20e-10 | 3 |
extraembryonic membrane | 4.95e-09 | 14 |
membranous layer | 4.95e-09 | 14 |
placenta | 2.11e-08 | 4 |
allantois | 2.11e-08 | 4 |