FFCP PHASE1:Hg19::chr17:62009702..62009717,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:62009702..62009717,-
|short_description=p2@CD79B
|description=CAGE_peak_2_at_CD79B_5end
|association_with_transcript=0bp_to_ENST00000006750,NM_000626,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=974 | |EntrezGene=974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1699 | |HGNC=1699 | ||
|TSSclassifier=strong | |||
|UniProt=P40259 | |UniProt=P40259 | ||
|association_with_transcript=0bp_to_ENST00000006750,NM_000626,NM_001039933,NM_021602,uc002jdp.1,uc002jdq.1,uc002jdr.1_5end | |||
|cluster_id=chr17:62009702..62009717,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_CD79B_5end | |||
|id=chr17:62009702..62009717,- | |||
|ontology_enrichment_celltype=CL:0000542!2.33e-41!53;CL:0000051!2.33e-41!53;CL:0000037!7.26e-41!172;CL:0000566!7.26e-41!172;CL:0000838!4.54e-40!52;CL:0002032!1.49e-37!165;CL:0000837!1.49e-37!165;CL:0000988!5.13e-37!182;CL:0000738!2.11e-35!140;CL:0002087!4.82e-34!119;CL:0000945!4.10e-33!24;CL:0000826!4.10e-33!24;CL:0002031!3.29e-31!124;CL:0000236!2.68e-20!14;CL:0000791!3.43e-15!18;CL:0000789!3.43e-15!18;CL:0002420!3.43e-15!18;CL:0002419!3.43e-15!18;CL:0000790!3.43e-15!18;CL:0000084!8.61e-11!25;CL:0000827!8.61e-11!25;CL:0000625!1.60e-10!11;CL:0000763!3.70e-08!112;CL:0000049!3.70e-08!112;CL:0000624!1.69e-07!6;CL:0002393!2.61e-07!9;CL:0002397!2.61e-07!9;CL:0000134!7.95e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.11e-58;24!CL:0000236;4.09e-33;13!CL:0000542;2.90e-29;53!CL:0000791;8.30e-11;18!CL:0000789;8.30e-11;18!CL:0002419;8.30e-11;18!CL:0002087;7.34e-10;104!CL:0000625;2.91e-09;11!CL:0000875;7.37e-09;3!CL:0002396;7.37e-09;3!CL:0000084;3.13e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.94e-58,24;CL:0000826,2.94e-58,24;CL:0000542,7.98e-50,53;CL:0000051,7.98e-50,53;CL:0000838,9.86e-48,52;CL:0000236,3.69e-35,14;CL:0002087,2.01e-27,115;CL:0000037,1.88e-26,168;CL:0002032,1.72e-25,161;CL:0000837,1.72e-25,161;CL:0000988,2.08e-24,177;CL:0002031,7.29e-23,120;CL:0000738,1.00e-22,136;CL:0000791,7.36e-11,18;CL:0000789,7.36e-11,18;CL:0002420,7.36e-11,18;CL:0002419,7.36e-11,18;CL:0000790,7.36e-11,18;CL:0002393,5.76e-10,9;CL:0002397,5.76e-10,9;CL:0000625,2.47e-09,11;CL:0000875,7.30e-09,3;CL:0002396,7.30e-09,3;CL:0000817,2.92e-08,3;CL:0000084,2.88e-07,25;CL:0000827,2.88e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;2.90e-29;53!CL:0000790;8.30e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!1.17e-07!51;DOID:0060083!1.17e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.46e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.49e-09,10;DOID:2531,3.17e-08,51;DOID:0060083,3.17e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.06e-11!102;UBERON:0003061!3.06e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0000178!8.71e-07!15;UBERON:0000179!8.71e-07!15;UBERON:0000463!8.71e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.58e-07;32!UBERON:0002106;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.81e-07,3;UBERON:0004854,1.81e-07,3;UBERON:0009034,1.81e-07,3;UBERON:0002095,1.81e-07,3;UBERON:0004782,1.81e-07,3;UBERON:0003281,1.81e-07,3;UBERON:0009664,1.81e-07,3;UBERON:0002296,1.81e-07,3;UBERON:0005602,1.81e-07,3;UBERON:0001179,1.81e-07,3;UBERON:0006293,1.81e-07,3 | |||
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| ||
|short_description=p2@CD79B | |||
}} | }} |
Latest revision as of 18:55, 16 September 2015
Short description: | p2@CD79B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD79B_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000006750, NM_000626, NM_001039933, NM_021602, uc002jdp.1, uc002jdq.1, uc002jdr.1_5end |
EntrezGene: | CD79B |
HGNC: | 1699 |
UniProt: | P40259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.94e-58 | 24 |
pro-B cell | 2.94e-58 | 24 |
lymphocyte | 7.98e-50 | 53 |
common lymphoid progenitor | 7.98e-50 | 53 |
lymphoid lineage restricted progenitor cell | 9.86e-48 | 52 |
B cell | 3.69e-35 | 14 |
nongranular leukocyte | 2.01e-27 | 115 |
hematopoietic stem cell | 1.88e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.72e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-25 | 161 |
hematopoietic cell | 2.08e-24 | 177 |
hematopoietic lineage restricted progenitor cell | 7.29e-23 | 120 |
leukocyte | 1.00e-22 | 136 |
mature alpha-beta T cell | 7.36e-11 | 18 |
alpha-beta T cell | 7.36e-11 | 18 |
immature T cell | 7.36e-11 | 18 |
mature T cell | 7.36e-11 | 18 |
immature alpha-beta T cell | 7.36e-11 | 18 |
intermediate monocyte | 5.76e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.76e-10 | 9 |
CD8-positive, alpha-beta T cell | 2.47e-09 | 11 |
non-classical monocyte | 7.30e-09 | 3 |
CD14-low, CD16-positive monocyte | 7.30e-09 | 3 |
precursor B cell | 2.92e-08 | 3 |
T cell | 2.88e-07 | 25 |
pro-T cell | 2.88e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.81e-07 | 3 |
gastrointestinal system mesentery | 1.81e-07 | 3 |
stomach region | 1.81e-07 | 3 |
mesentery | 1.81e-07 | 3 |
gastrointestinal system serosa | 1.81e-07 | 3 |
mesentery of stomach | 1.81e-07 | 3 |
gut mesentery | 1.81e-07 | 3 |
dorsal mesentery | 1.81e-07 | 3 |
dorsal mesogastrium | 1.81e-07 | 3 |
peritoneal cavity | 1.81e-07 | 3 |
spleen primordium | 1.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.49e-09 | 10 |
hematologic cancer | 3.17e-08 | 51 |
immune system cancer | 3.17e-08 | 51 |