FFCP PHASE1:Hg19::chr3:124842457..124842464,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |EntrezGene=84561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |HGNC=15595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000483944_5end | |association_with_transcript=-7bp_to_ENST00000483944_5end | ||
|cluster_id=chr3:124842457..124842464,- | |||
|description=CAGE_peak_2_at_SLC12A8_5end | |description=CAGE_peak_2_at_SLC12A8_5end | ||
|id=chr3:124842457..124842464,- | |id=chr3:124842457..124842464,- | ||
|ontology_enrichment_celltype=CL:0000077!4.69e-11!19 | |ontology_enrichment_celltype=CL:0000077!4.69e-11!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.08e-16;19!CL:0000134;1.04e-08;55!CL:0000723;1.21e-08;61!CL:0000048;2.15e-08;58!CL:0002494;6.14e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.45e-16,19;CL:0002494,7.53e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.18e-10!14 | |ontology_enrichment_disease=DOID:2394!1.18e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.55e-14;14!DOID:193;1.86e-07;29!DOID:120;6.32e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-14,14;DOID:193,1.72e-07,29;DOID:120,5.87e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.52e-12!32;UBERON:0000956!6.95e-12!25;UBERON:0000203!6.95e-12!25;UBERON:0001893!7.62e-12!34;UBERON:0002791!2.68e-11!33;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0002619!1.49e-10!22;UBERON:0001950!2.08e-09!20;UBERON:0002780!6.19e-09!41;UBERON:0001890!6.19e-09!41;UBERON:0006240!6.19e-09!41;UBERON:0003080!1.63e-08!42;UBERON:0000955!9.52e-08!69;UBERON:0006238!9.52e-08!69;UBERON:0000073!2.08e-07!94;UBERON:0001016!2.08e-07!94;UBERON:0005743!2.47e-07!86;UBERON:0001017!2.66e-07!82;UBERON:0000992!3.87e-07!13;UBERON:0003056!5.93e-07!61 | |ontology_enrichment_uberon=UBERON:0001869!2.52e-12!32;UBERON:0000956!6.95e-12!25;UBERON:0000203!6.95e-12!25;UBERON:0001893!7.62e-12!34;UBERON:0002791!2.68e-11!33;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0002619!1.49e-10!22;UBERON:0001950!2.08e-09!20;UBERON:0002780!6.19e-09!41;UBERON:0001890!6.19e-09!41;UBERON:0006240!6.19e-09!41;UBERON:0003080!1.63e-08!42;UBERON:0000955!9.52e-08!69;UBERON:0006238!9.52e-08!69;UBERON:0000073!2.08e-07!94;UBERON:0001016!2.08e-07!94;UBERON:0005743!2.47e-07!86;UBERON:0001017!2.66e-07!82;UBERON:0000992!3.87e-07!13;UBERON:0003056!5.93e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.41e-11;22!UBERON:0000956;7.55e-11;25!UBERON:0000203;7.55e-11;25!UBERON:0001950;1.18e-09;20!UBERON:0000992;4.63e-08;13!UBERON:0002118;5.12e-08;5!UBERON:0001869;1.16e-07;32!UBERON:0001893;3.20e-07;34!UBERON:0002791;7.08e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.48e-11,22;UBERON:0000956,5.54e-11,25;UBERON:0000203,5.54e-11,25;UBERON:0001950,7.38e-10,20;UBERON:0001869,8.54e-09,32;UBERON:0002118,3.67e-08,5;UBERON:0000992,3.70e-08,13;UBERON:0001893,4.94e-08,34;UBERON:0002791,1.01e-07,32;UBERON:0003528,4.78e-07,34;UBERON:0002020,4.78e-07,34;UBERON:0001017,7.23e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0,0.61560529038394,0,2.19418305034661,1.14494394852423,0.821246550437305,0.87879847716362,0.458480434487708,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0,6.61692502340946,8.45330331546032,1.6553756092201,0.689491361473237,0,1.35426486594342,0,0.272906150057846,0.674170453335254,0.306083892370903,0.641858054152187,1.27867425159808,3.62836430205388,7.77908264724364,2.55734850319616,0,1.70215567407342,0.622822248995575,7.78870862295904,8.86520961314342,3.47502151528187,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,2.30152611318355,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0.916853528483988,0,0,0,0,10.6366368415092,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.8994576749687,2.25095607382472,2.29469296599051,5.32002573297536,3.36406560085384,0,4.9333509683432,1.24484414159907,0.269421344139376,0,0,0,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0,0,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0.877955241761676,0,0,0.680593098960126,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,4.115740113314,5.88034845542168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,4.43190610957315,0,4.90482835552803,0,0,0,0,0,0,9.85326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.97324946242889,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0,7.43485567022367,0,0.823240336780769,1.30294473717494,9.59558261604874,0,50.3403759689509,39.2190056370132,152.958676508547,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0,1.00509759200609,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.937131319941706,0.300946099727719,2.27407504055985,0,0,1.29058417979192,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,1.28139149255701,1.02341449813341,0.482561763430822,0,0.616838775210622,1.42049380250502,1.23190734020714,0,0.116210378459959,0,0,0,1.37777337797528,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,1.08378575017541,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0.650756789328606,1.54561517471583,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.767518373630648,0.137836572484531,0.751941714077915,0.435050081742686,1.27839941124151,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,28.7851592824975,0,0,3.5002357271853,0,0.359744915166629,4.11805544604082,3.41655966802491,0.202182481573316,0,0,0,2.68084838594413,0,0.409499734223957,2.12108147930569,2.26016233240486,2.75682671773062,0,0,0,0,0,1.54911749049875,0.281695602532241,3.29846110069318,0.687743287091848,0,0,0.211107635297664,1.31717957183961,0,0,0,0.670302275535787,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19116680008915,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,0,0.614321404198464,1.9882952955326,4.3607519087259,0,3.46088135876195,0,0,0.276283915531148,0,11.249555075237,0.123084805461069,0,0,0,0,0.591860433821602,0,0,5.81599647657131,2.50473865036998,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,2.63262476584767,0,0,0.0769502585037971,0,0,0.0897576444097721,0,9.57003479195758,4.67147726349498,11.1937302963913,0,3.29658538429552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,1.91858694505451,0.397429223405979,3.48209377757333,0,0.320635281006135,0.640358984218058,2.39771531498556,0,0,0,0,0.372757606696298,0,3.39760515184035,3.24268823568233,0.305994652908965,30.628762529561,0.600420288709789,0,0,13.7524941254386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,2.04305109167363,0,0,0,0,0,3.21972650287531,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0.851940108927109,1.35974509824151,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,0.886068179966986,3.90484047686282,3.505346059782,0,0,0,0,0,0,0,0.235265819698172,0,0,1.34329322598187,0,3.32883516901568,0.947015026375446,0.50313580350515,2.66943366478961,2.97492088916001,9.52754819708406,2.95330681107283,1.03498604992744,4.14171594625626,0.899606224327209,9.78156628320434,2.07353103920428,5.58267600571789,4.17396049449387,35.4607957233436,72.7337955242399,4.47557806525128,1.81848659202559,14.7152463148209,11.6008439969623,4.77715066438339,0,0.343395705182793,1.34699795506368,0,47.7697179410112,3.21662387062389,0,2.26705925512272,40.9794779553186,107.194676573833,0.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| ||
|short_description=p2@SLC12A8 | |short_description=p2@SLC12A8 | ||
}} | }} |
Latest revision as of 03:18, 20 September 2015
Short description: | p2@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC12A8_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000483944_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.45e-16 | 19 |
cardiocyte | 7.53e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.48e-11 | 22 |
cerebral cortex | 5.54e-11 | 25 |
pallium | 5.54e-11 | 25 |
neocortex | 7.38e-10 | 20 |
cerebral hemisphere | 8.54e-09 | 32 |
right ovary | 3.67e-08 | 5 |
female gonad | 3.70e-08 | 13 |
telencephalon | 4.94e-08 | 34 |
regional part of telencephalon | 1.01e-07 | 32 |
brain grey matter | 4.78e-07 | 34 |
gray matter | 4.78e-07 | 34 |
central nervous system | 7.23e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-14 | 14 |
reproductive organ cancer | 1.72e-07 | 29 |
female reproductive organ cancer | 5.87e-07 | 27 |