FFCP PHASE1:Hg19::chr17:7591647..7591672,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7591647..7591672,+
|short_description=p2@WRAP53
|description=CAGE_peak_2_at_WRAP53_5end
|association_with_transcript=0bp_to_NM_001143992,NM_018081,uc002gi...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55135 | |EntrezGene=55135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25522 | |HGNC=25522 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUR4 | |UniProt=Q9BUR4 | ||
|association_with_transcript=0bp_to_NM_001143992,NM_018081,uc002gip.2,uc002giq.2,uc002gir.2,uc010cnl.2_5end | |||
|cluster_id=chr17:7591647..7591672,+ | |||
|description=CAGE_peak_2_at_WRAP53_5end | |||
|id=chr17:7591647..7591672,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.70e-23!53;CL:0000051!2.70e-23!53;CL:0000838!7.19e-23!52;CL:0000988!1.04e-21!182;CL:0000037!8.33e-21!172;CL:0000566!8.33e-21!172;CL:0002032!3.54e-19!165;CL:0000837!3.54e-19!165;CL:0000738!2.16e-16!140;CL:0002087!9.25e-15!119;CL:0002031!3.38e-14!124;CL:0000945!1.18e-11!24;CL:0000826!1.18e-11!24;CL:0000084!2.18e-11!25;CL:0000827!2.18e-11!25;CL:0000791!2.05e-08!18;CL:0000789!2.05e-08!18;CL:0002420!2.05e-08!18;CL:0002419!2.05e-08!18;CL:0000790!2.05e-08!18;CL:0000236!4.87e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.22e-14;53!CL:0000084;5.37e-12;25!CL:0000945;5.89e-12;24!CL:0000791;1.06e-08;18!CL:0000789;1.06e-08;18!CL:0002419;1.06e-08;18!CL:0000236;4.97e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.42e-25,53;CL:0000051,6.42e-25,53;CL:0000838,1.84e-24,52;CL:0000988,1.08e-23,177;CL:0000037,3.49e-23,168;CL:0002032,2.09e-21,161;CL:0000837,2.09e-21,161;CL:0000738,3.21e-18,136;CL:0002087,4.21e-16,115;CL:0002031,1.17e-15,120;CL:0000945,2.10e-12,24;CL:0000826,2.10e-12,24;CL:0000084,4.04e-12,25;CL:0000827,4.04e-12,25;CL:0000791,6.31e-09,18;CL:0000789,6.31e-09,18;CL:0002420,6.31e-09,18;CL:0002419,6.31e-09,18;CL:0000790,6.31e-09,18;CL:0000236,1.60e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-14;53!CL:0000790;1.06e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!3.50e-10!51;DOID:0060083!3.50e-10!51;DOID:1240!7.99e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.40e-07;51!DOID:0060083;8.40e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.66e-11,51;DOID:0060083,4.66e-11,51;DOID:1240,1.99e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@WRAP53 | |||
}} | }} |
Latest revision as of 20:06, 17 September 2015
Short description: | p2@WRAP53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WRAP53_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001143992, NM_018081, uc002gip.2, uc002giq.2, uc002gir.2, uc010cnl.2_5end |
EntrezGene: | WRAP53 |
HGNC: | 25522 |
UniProt: | Q9BUR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.42e-25 | 53 |
common lymphoid progenitor | 6.42e-25 | 53 |
lymphoid lineage restricted progenitor cell | 1.84e-24 | 52 |
hematopoietic cell | 1.08e-23 | 177 |
hematopoietic stem cell | 3.49e-23 | 168 |
hematopoietic oligopotent progenitor cell | 2.09e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-21 | 161 |
leukocyte | 3.21e-18 | 136 |
nongranular leukocyte | 4.21e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.17e-15 | 120 |
lymphocyte of B lineage | 2.10e-12 | 24 |
pro-B cell | 2.10e-12 | 24 |
T cell | 4.04e-12 | 25 |
pro-T cell | 4.04e-12 | 25 |
mature alpha-beta T cell | 6.31e-09 | 18 |
alpha-beta T cell | 6.31e-09 | 18 |
immature T cell | 6.31e-09 | 18 |
mature T cell | 6.31e-09 | 18 |
immature alpha-beta T cell | 6.31e-09 | 18 |
B cell | 1.60e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.66e-11 | 51 |
immune system cancer | 4.66e-11 | 51 |
leukemia | 1.99e-07 | 39 |