FFCP PHASE1:Hg19::chr17:77429187..77429190,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:77429187..77429190,+
|short_description=p@chr17:77429187..77429190,+
|description=CAGE_peak_at_chr17:77429187..77429190,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:77429187..77429190,+ | |||
|coexpression_cluster_id=C600 | |||
|description=CAGE_peak_at_chr17:77429187..77429190,+ | |||
|id=chr17:77429187..77429190,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.96e-08;2!CL:0000558;1.96e-08;2!CL:0002367;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.96e-08,2;CL:0000765,1.96e-08,2;CL:0000050,1.96e-08,2;CL:0000038,1.96e-08,2;CL:0000558,1.96e-08,2;CL:0000547,1.96e-08,2;CL:0000549,1.96e-08,2;CL:0000550,1.96e-08,2;CL:0000552,1.96e-08,2;CL:0002367,1.20e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.06e-08!235;DOID:14566!1.25e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.01e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-23;9!UBERON:0001557;1.96e-23;9!UBERON:0000072;5.49e-08;37!UBERON:0005969;1.28e-07;2!UBERON:0003956;1.28e-07;2!UBERON:0000065;7.92e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.58e-23,9;UBERON:0001557,2.85e-10,19;UBERON:0008947,3.36e-08,38;UBERON:0003258,3.36e-08,38;UBERON:0005969,1.20e-07,2;UBERON:0003956,1.20e-07,2 | |||
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| ||
|short_description=p@chr17:77429187..77429190,+ | |||
}} | }} |
Latest revision as of 22:16, 25 July 2015
Short description: | p@chr17:77429187..77429190, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77429187..77429190, + |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.96e-08 | 2 |
erythroblast | 1.96e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.96e-08 | 2 |
erythroid progenitor cell | 1.96e-08 | 2 |
reticulocyte | 1.96e-08 | 2 |
proerythroblast | 1.96e-08 | 2 |
basophilic erythroblast | 1.96e-08 | 2 |
polychromatophilic erythroblast | 1.96e-08 | 2 |
orthochromatic erythroblast | 1.96e-08 | 2 |
trabecular meshwork cell | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.58e-23 | 9 |
upper respiratory tract | 2.85e-10 | 19 |
respiratory primordium | 3.36e-08 | 38 |
endoderm of foregut | 3.36e-08 | 38 |
reticulum trabeculare | 1.20e-07 | 2 |
aqueous drainage system | 1.20e-07 | 2 |