FFCP PHASE1:Hg19::chr12:123636839..123636885,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:123636839..123636885,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr12:123636839..123636885,- | |description=CAGE_peak_at_chr12:123636839..123636885,- | ||
|id=chr12:123636839..123636885,- | |id=chr12:123636839..123636885,- | ||
|ontology_enrichment_celltype=CL:0002619!8.15e-07!3 | |ontology_enrichment_celltype=CL:0002619!8.15e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4231!1.71e-09!2;DOID:1907!1.71e-09!2 | |ontology_enrichment_disease=DOID:4231!1.71e-09!2;DOID:1907!1.71e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.79e-18!4;UBERON:0005058!6.79e-18!4;UBERON:0009113!6.79e-18!4;UBERON:0003295!6.79e-18!4;UBERON:0005562!6.79e-18!4;UBERON:0002146!1.03e-17!1;UBERON:0005623!1.03e-17!1;UBERON:0000974!1.01e-15!10;UBERON:0003351!2.91e-12!6;UBERON:0004177!1.21e-10!7;UBERON:0000341!1.44e-09!2;UBERON:0003408!1.02e-07!10;UBERON:0001042!1.02e-07!10;UBERON:0009145!1.02e-07!10;UBERON:0006562!4.30e-07!11;UBERON:0009722!4.30e-07!11;UBERON:0007690!4.30e-07!11;UBERON:0003978!9.12e-07!3;UBERON:0009751!9.12e-07!3;UBERON:0000946!9.12e-07!3;UBERON:0002523!9.12e-07!3;UBERON:0005983!9.12e-07!3;UBERON:0002165!9.12e-07!3;UBERON:0002062!9.12e-07!3;UBERON:0007280!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0002370!6.79e-18!4;UBERON:0005058!6.79e-18!4;UBERON:0009113!6.79e-18!4;UBERON:0003295!6.79e-18!4;UBERON:0005562!6.79e-18!4;UBERON:0002146!1.03e-17!1;UBERON:0005623!1.03e-17!1;UBERON:0000974!1.01e-15!10;UBERON:0003351!2.91e-12!6;UBERON:0004177!1.21e-10!7;UBERON:0000341!1.44e-09!2;UBERON:0003408!1.02e-07!10;UBERON:0001042!1.02e-07!10;UBERON:0009145!1.02e-07!10;UBERON:0006562!4.30e-07!11;UBERON:0009722!4.30e-07!11;UBERON:0007690!4.30e-07!11;UBERON:0003978!9.12e-07!3;UBERON:0009751!9.12e-07!3;UBERON:0000946!9.12e-07!3;UBERON:0002523!9.12e-07!3;UBERON:0005983!9.12e-07!3;UBERON:0002165!9.12e-07!3;UBERON:0002062!9.12e-07!3;UBERON:0007280!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002368;1.64e-10;33!UBERON:0002390;1.64e-10;32!UBERON:0000949;1.53e-08;43!UBERON:0002530;3.42e-07;57!UBERON:0002193;3.42e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-98,4;UBERON:0005058,1.55e-98,4;UBERON:0009113,1.55e-98,4;UBERON:0003295,1.55e-98,4;UBERON:0005562,1.55e-98,4;UBERON:0003351,2.83e-66,6;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000974,2.00e-40,10;UBERON:0003408,2.00e-40,10;UBERON:0001042,2.00e-40,10;UBERON:0009145,2.00e-40,10;UBERON:0006562,6.80e-37,11;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0001557,5.37e-22,19;UBERON:0004807,2.22e-15,28;UBERON:0000077,6.74e-15,29;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0000072,1.08e-09,47;UBERON:0003929,1.34e-08,54;UBERON:0000065,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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|short_description=p@chr12:123636839..123636885,- | |short_description=p@chr12:123636839..123636885,- | ||
}} | }} |
Latest revision as of 06:14, 24 July 2015
Short description: | p@chr12:123636839..123636885, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123636839..123636885, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-98 | 4 |
hemolymphoid system gland | 1.55e-98 | 4 |
thymic region | 1.55e-98 | 4 |
pharyngeal gland | 1.55e-98 | 4 |
thymus primordium | 1.55e-98 | 4 |
pharyngeal epithelium | 2.83e-66 | 6 |
hemopoietic organ | 4.76e-57 | 7 |
immune organ | 4.76e-57 | 7 |
neck | 2.00e-40 | 10 |
gland of gut | 2.00e-40 | 10 |
chordate pharynx | 2.00e-40 | 10 |
pharyngeal region of foregut | 2.00e-40 | 10 |
pharynx | 6.80e-37 | 11 |
entire pharyngeal arch endoderm | 6.80e-37 | 11 |
early pharyngeal endoderm | 6.80e-37 | 11 |
pharyngeal arch system | 3.88e-23 | 18 |
upper respiratory tract | 5.37e-22 | 19 |
respiratory system epithelium | 2.22e-15 | 28 |
mixed endoderm/mesoderm-derived structure | 6.74e-15 | 29 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
segment of respiratory tract | 1.08e-09 | 47 |
gut epithelium | 1.34e-08 | 54 |
respiratory tract | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |