FFCP PHASE1:Hg19::chr12:7244261..7244276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=715 | |EntrezGene=715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1246 | |HGNC=1246 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB590488,EU832834,GQ129229_5end | |association_with_transcript=0bp_to_AB590488,EU832834,GQ129229_5end | ||
|cluster_id=chr12:7244261..7244276,- | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_12_at_C1R_5end | |description=CAGE_peak_12_at_C1R_5end | ||
|id=chr12:7244261..7244276,- | |id=chr12:7244261..7244276,- | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-09!180;CL:0000057!9.70e-09!75 | |ontology_enrichment_celltype=CL:0000055!2.10e-09!180;CL:0000057!9.70e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.77e-16;3!CL:0000388;1.77e-16;3!CL:0000499;5.03e-13;28!CL:0000153;7.02e-09;9!CL:0000447;7.02e-09;9!CL:0000327;4.34e-08;15!CL:0002615;9.02e-08;3!CL:0000214;1.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.97e-16,3;CL:0000388,1.97e-16,3;CL:0000499,4.51e-13,28;CL:0000153,6.89e-09,9;CL:0000447,6.89e-09,9;CL:0000327,4.31e-08,15;CL:0000136,4.88e-08,15;CL:0002615,1.07e-07,3;CL:0000214,1.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.20e-10!143;UBERON:0002100!2.12e-08!216;UBERON:0000481!5.51e-07!347;UBERON:0003104!5.72e-07!238;UBERON:0009142!5.72e-07!238 | |ontology_enrichment_uberon=UBERON:0005256!3.20e-10!143;UBERON:0002100!2.12e-08!216;UBERON:0000481!5.51e-07!347;UBERON:0003104!5.72e-07!238;UBERON:0009142!5.72e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.77e-16;3!UBERON:0000043;1.77e-16;3!UBERON:0007845;1.77e-16;3!UBERON:0004151;2.74e-15;3!UBERON:0002081;6.90e-11;2!UBERON:0004457;3.49e-09;9!UBERON:0000042;3.49e-09;9!UBERON:0006915;1.26e-07;3!UBERON:0007616;1.26e-07;3!UBERON:0002217;1.26e-07;3!UBERON:0002018;1.26e-07;3!UBERON:0002423;7.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.97e-16,3;UBERON:0000043,1.97e-16,3;UBERON:0007845,1.97e-16,3;UBERON:0004151,3.27e-15,3;UBERON:0002081,7.83e-11,2;UBERON:0010227,7.83e-11,2;UBERON:0006915,1.18e-07,3;UBERON:0007616,1.18e-07,3;UBERON:0002217,1.18e-07,3;UBERON:0002018,1.18e-07,3;UBERON:0009854,1.75e-07,23;UBERON:0004145,3.14e-07,3;UBERON:0009497,6.88e-07,25;UBERON:0000015,6.88e-07,25;UBERON:0002423,6.88e-07,25;UBERON:0006235,6.88e-07,25;UBERON:0004161,6.88e-07,25;UBERON:0004457,7.08e-07,12;UBERON:0000042,7.08e-07,12 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,2.00146596706261,2.23480547213644,3.48935409640147,0,0,1.04474251279935,0,0,0,0,0,0.994192127183747,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,1.01392563272577,0,1.94653948121054,0,0,0.087834785693126,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,2.86836620748814,0.354668382198357,0.560677600142307,0,0,1.24484414159907,0.404132016209064,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0.323745888736263,0,0,0,0.309977343527296,0,1.7308685049499,0,0.718618141816238,0,0,0,0.438977620880838,0,1.95309476578576,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0,0.252433774244115,0.276149695926898,1.45481451136931,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.674156540800822,0.784885860501384,0,0,0,0.8231480226628,4.41026134156626,8.87285243752816,8.84544495009863,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.831883446123229,0.713715955188647,0.157702415033935,0.585707074963566,0,0,0,0,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0.574072240823034,0.728364672026868,1.83574180943194,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0.460511024178389,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.953150969619124,0.511795582622668,0.855877976067841,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0.48763373908959,1.21856744815642,0,0,0.565621727814851,1.13008116620243,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0.354761064070598,1.47775344708365,3.29294892959902,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.32418394073086,0,0.542999601753713,0,0,0,0,0.340776043570843,0.226624183040251,2.78449243988357,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0.554805861502613,0.568209015825267,0.754703705257725,0,0,0.604923695052956,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0,0.214821114084977,0,0,0,1.37358282073117,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0,0,0.179088841081487,0,1.31570429747224,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,9.29987545416878,4.62175628631418,2.16313281061895,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,0.639701945702943,0,0,0,0,0.381882949668989,0,1.52401723527873,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,2.00146596706261,2.23480547213644,3.48935409640147,0,0,1.04474251279935,0,0,0,0,0,0.994192127183747,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,1.01392563272577,0,1.94653948121054,0,0,0.087834785693126,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,2.86836620748814,0.354668382198357,0.560677600142307,0,0,1.24484414159907,0.404132016209064,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0.323745888736263,0,0,0,0.309977343527296,0,1.7308685049499,0,0.718618141816238,0,0,0,0.438977620880838,0,1.95309476578576,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0,0.252433774244115,0.276149695926898,1.45481451136931,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.674156540800822,0.784885860501384,0,0,0,0.8231480226628,4.41026134156626,8.87285243752816,8.84544495009863,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.831883446123229,0.713715955188647,0.157702415033935,0.585707074963566,0,0,0,0,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0.574072240823034,0.728364672026868,1.83574180943194,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0.460511024178389,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.953150969619124,0.511795582622668,0.855877976067841,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0.48763373908959,1.21856744815642,0,0,0.565621727814851,1.13008116620243,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0.354761064070598,1.47775344708365,3.29294892959902,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.32418394073086,0,0.542999601753713,0,0,0,0,0.340776043570843,0.226624183040251,2.78449243988357,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0.554805861502613,0.568209015825267,0.754703705257725,0,0,0.604923695052956,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0,0.214821114084977,0,0,0,1.37358282073117,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0,0,0.179088841081487,0,1.31570429747224,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,9.29987545416878,4.62175628631418,2.16313281061895,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,0.639701945702943,0,0,0,0,0.381882949668989,0,1.52401723527873,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.402547587182052,0 | ||
|short_description=p12@C1R | |short_description=p12@C1R | ||
}} | }} |
Latest revision as of 17:58, 24 September 2015
Short description: | p12@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_C1R_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_AB590488, EU832834, GQ129229_5end |
EntrezGene: | C1R |
HGNC: | 1246 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.97e-16 | 3 |
tendon cell | 1.97e-16 | 3 |
stromal cell | 4.51e-13 | 28 |
GAG secreting cell | 6.89e-09 | 9 |
carbohydrate secreting cell | 6.89e-09 | 9 |
extracellular matrix secreting cell | 4.31e-08 | 15 |
fat cell | 4.88e-08 | 15 |
adipocyte of omentum tissue | 1.07e-07 | 3 |
synovial cell | 1.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.97e-16 | 3 |
tendon | 1.97e-16 | 3 |
regular connective tissue | 1.97e-16 | 3 |
cardiac chamber | 3.27e-15 | 3 |
cardiac atrium | 7.83e-11 | 2 |
future cardiac atrium | 7.83e-11 | 2 |
stratified squamous epithelium | 1.18e-07 | 3 |
layer of synovial tissue | 1.18e-07 | 3 |
synovial joint | 1.18e-07 | 3 |
synovial membrane of synovial joint | 1.18e-07 | 3 |
digestive tract diverticulum | 1.75e-07 | 23 |
outflow tract | 3.14e-07 | 3 |
epithelium of foregut-midgut junction | 6.88e-07 | 25 |
anatomical boundary | 6.88e-07 | 25 |
hepatobiliary system | 6.88e-07 | 25 |
foregut-midgut junction | 6.88e-07 | 25 |
septum transversum | 6.88e-07 | 25 |
cavity lining | 7.08e-07 | 12 |
serous membrane | 7.08e-07 | 12 |