FFCP PHASE1:Hg19::chr18:21574704..21574720,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:21574704..21574720,-
|short_description=p@chr18:21574704..21574720,-
|description=CAGE_peak_at_chr18:21574704..21574720,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:21574704..21574720,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr18:21574704..21574720,- | |||
|id=chr18:21574704..21574720,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.65e-10;1!CL:0000791;7.31e-08;18!CL:0000789;7.31e-08;18!CL:0002419;7.31e-08;18!CL:0000624;9.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.65e-10,1;CL:0000791,7.24e-08,18;CL:0000789,7.24e-08,18;CL:0002420,7.24e-08,18;CL:0002419,7.24e-08,18;CL:0000790,7.24e-08,18;CL:0000624,8.39e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.18e-23;29!CL:0000790;7.31e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.65e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.50e-12,106;DOID:3030,1.65e-10,1;DOID:0050687,3.30e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.18e-18!9;UBERON:0001049!6.59e-12!57;UBERON:0005068!6.59e-12!57;UBERON:0006241!6.59e-12!57;UBERON:0007135!6.59e-12!57;UBERON:0001557!7.82e-11!19;UBERON:0002616!4.49e-09!59;UBERON:0003076!4.87e-08!15;UBERON:0003057!4.87e-08!15;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0000063!3.14e-07!97;UBERON:0002298!4.90e-07!8;UBERON:0001017!6.02e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.15e-78;9!UBERON:0001557;6.15e-78;9!UBERON:0000072;5.67e-17;37!UBERON:0000065;2.63e-14;44!UBERON:0001004;1.31e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.53e-78,9;UBERON:0001557,2.15e-36,19;UBERON:0008947,1.39e-17,38;UBERON:0003258,1.39e-17,38;UBERON:0000072,5.70e-14,47;UBERON:0000065,5.43e-12,54;UBERON:0001004,2.13e-08,74;UBERON:0001041,6.00e-07,87 | |||
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| ||
|short_description=p@chr18:21574704..21574720,- | |||
}} | }} |
Latest revision as of 00:01, 26 July 2015
Short description: | p@chr18:21574704..21574720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21574704..21574720, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.65e-10 | 1 |
mature alpha-beta T cell | 7.24e-08 | 18 |
alpha-beta T cell | 7.24e-08 | 18 |
immature T cell | 7.24e-08 | 18 |
mature T cell | 7.24e-08 | 18 |
immature alpha-beta T cell | 7.24e-08 | 18 |
CD4-positive, alpha-beta T cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.53e-78 | 9 |
upper respiratory tract | 2.15e-36 | 19 |
respiratory primordium | 1.39e-17 | 38 |
endoderm of foregut | 1.39e-17 | 38 |
segment of respiratory tract | 5.70e-14 | 47 |
respiratory tract | 5.43e-12 | 54 |
respiratory system | 2.13e-08 | 74 |
foregut | 6.00e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.50e-12 | 106 |
mucinous adenocarcinoma | 1.65e-10 | 1 |
cell type cancer | 3.30e-08 | 143 |