FFCP PHASE1:Hg19::chr14:24732368..24732391,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |EntrezGene=7051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |HGNC=11777 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWR7 | |UniProt=B4DWR7 | ||
|association_with_transcript=0bp_to_ENST00000544573_5end | |association_with_transcript=0bp_to_ENST00000544573_5end | ||
|cluster_id=chr14:24732368..24732391,- | |||
|coexpression_cluster_id=C683 | |coexpression_cluster_id=C683 | ||
|description=CAGE_peak_1_at_TGM1_5end | |description=CAGE_peak_1_at_TGM1_5end | ||
|id=chr14:24732368..24732391,- | |id=chr14:24732368..24732391,- | ||
|ontology_enrichment_celltype=CL:0002076!3.31e-14!43;CL:0000223!4.85e-11!59;CL:0002368!1.03e-10!13;CL:0000066!1.97e-10!254;CL:0000622!9.12e-09!5;CL:0000076!2.13e-08!62;CL:0000150!5.56e-08!9;CL:0000154!3.65e-07!6;CL:0002159!7.47e-07!13 | |ontology_enrichment_celltype=CL:0002076!3.31e-14!43;CL:0000223!4.85e-11!59;CL:0002368!1.03e-10!13;CL:0000066!1.97e-10!254;CL:0000622!9.12e-09!5;CL:0000076!2.13e-08!62;CL:0000150!5.56e-08!9;CL:0000154!3.65e-07!6;CL:0002159!7.47e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002368;5.01e-18;13!CL:0002076;2.08e-15;42!CL:0000622;8.48e-14;5!CL:0000154;2.04e-11;6!CL:0002159;9.65e-11;14!CL:0002202;1.99e-10;9!CL:0002632;1.99e-10;9!CL:0000150;2.25e-10;9!CL:0002623;3.57e-09;3!CL:0002328;4.35e-09;3!CL:0000307;1.10e-08;3!CL:0002577;3.34e-08;3!CL:0002251;2.14e-07;20!CL:0000240;4.81e-07;6!CL:0000311;4.81e-07;6!CL:0000079;4.81e-07;6!CL:0000237;4.81e-07;6!CL:0000362;5.87e-07;9!CL:0000575;7.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.27e-20,42;CL:0002368,5.61e-18,13;CL:0000622,8.38e-14,5;CL:0000223,8.00e-13,58;CL:0000154,2.02e-11,6;CL:0002159,9.72e-11,14;CL:0002202,1.94e-10,9;CL:0002632,1.94e-10,9;CL:0000150,2.22e-10,9;CL:0002623,3.52e-09,3;CL:0002328,4.35e-09,3;CL:0000066,8.43e-09,253;CL:0000068,1.06e-08,3;CL:0000069,1.06e-08,3;CL:0000307,1.06e-08,3;CL:0000377,1.06e-08,3;CL:0002577,3.30e-08,3;CL:0002251,2.16e-07,20;CL:0000240,4.93e-07,6;CL:0000311,4.93e-07,6;CL:0000079,4.93e-07,6;CL:0000237,4.93e-07,6;CL:0000036,4.93e-07,6;CL:0000357,4.93e-07,6;CL:0000114,4.93e-07,6;CL:0000362,5.99e-07,9;CL:0000575,7.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.10e-08;3!CL:0000223;2.63e-07;58!CL:0000357;4.81e-07;6!CL:0000114;4.81e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.02e-13!169;UBERON:0000925!4.02e-13!169;UBERON:0006595!4.02e-13!169;UBERON:0001004!5.37e-13!72;UBERON:0005631!7.60e-10!14;UBERON:0000158!7.60e-10!14;UBERON:0000065!2.55e-09!53;UBERON:0003124!8.49e-09!7;UBERON:0000077!1.43e-08!130;UBERON:0000166!3.00e-08!21;UBERON:0000161!5.39e-08!35;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0004921!2.56e-07!129;UBERON:0004185!2.56e-07!129;UBERON:0005181!4.36e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!4.02e-13!169;UBERON:0000925!4.02e-13!169;UBERON:0006595!4.02e-13!169;UBERON:0001004!5.37e-13!72;UBERON:0005631!7.60e-10!14;UBERON:0000158!7.60e-10!14;UBERON:0000065!2.55e-09!53;UBERON:0003124!8.49e-09!7;UBERON:0000077!1.43e-08!130;UBERON:0000166!3.00e-08!21;UBERON:0000161!5.39e-08!35;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0004921!2.56e-07!129;UBERON:0004185!2.56e-07!129;UBERON:0005181!4.36e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.05e-10;15!UBERON:0001558;3.05e-10;15!UBERON:0003126;2.50e-09;7!UBERON:0001005;2.50e-09;7!UBERON:0004815;4.35e-09;3!UBERON:0002031;4.35e-09;3!UBERON:0000165;8.91e-08;28!UBERON:0005181;1.84e-07;35!UBERON:0005178;9.62e-07;34!UBERON:0002224;9.62e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.12e-13,74;UBERON:0004119,5.22e-11,160;UBERON:0000925,5.22e-11,160;UBERON:0006595,5.22e-11,160;UBERON:0007196,3.00e-10,15;UBERON:0001558,3.00e-10,15;UBERON:0000065,1.87e-09,54;UBERON:0003126,2.44e-09,7;UBERON:0001005,2.44e-09,7;UBERON:0004815,4.35e-09,3;UBERON:0002031,4.35e-09,3;UBERON:0000166,1.76e-08,22;UBERON:0005181,3.19e-08,35;UBERON:0003102,7.45e-08,99;UBERON:0000165,1.98e-07,29;UBERON:0000930,1.98e-07,29;UBERON:0005178,3.60e-07,34;UBERON:0002224,3.60e-07,34 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.6012220400881,40.3615931162855,34.756876955678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.9408389224012,0,0,0,0,0,0,0,0,0.916853528483988,142.439457722384,216.167330143322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,102.046008201353,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,10.0495643644914,15.5465288736776,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,8.23127140564692,12.3641928583382,7.23808601363742,21.2953423864618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41017665312057,0,1.16253575405585,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,9.19751518874925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,10.3063374291728,8.32177197552485,8.46692821323105,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,59.5763998415249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.309123034943167,0,0,14.9309039879005,20.8019278731687,0,0,0,0,0,0,0,0,0,12.2310837367124,1.15314040419064,2.16941611240793,5.8671512896219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6570750866935,26.8120910214315,10.8890984861323,0.188287601553558,2.15252686335615,11.7930032967338,37.2481328970808,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92359005739301,1.78178808499583,11.6721066797708,0,0,0,0,0,1.39473591775749,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,93.6927561552214,22.0847241905898,0,0.922255617552241,0.807818799687949,12.820389886797,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0345239835768,1.22206028986725,0,0,0,0,4.81546588379273,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,16.854692355273,0,3.84398670132466,0,0,0.0730893170861856,0,240.241793841815,0,5.64951851951331,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0.446342914883745,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.86900977278975,0,7.37956312718385,0.236417121897595,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0.640724475406168,0.157204305099666,0.828478110694391,0,0,0,6.38341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,10.5076379773714,0,0,0,0,0.895444205407437,2.47041157728778,0.219284049578707,0,1.3503982678964,0.844712203265363,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,30.2139736674,16.7960860208903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,19.0765742462546,0.462102664601353,0,0,0,1.20336525358812,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,1.40136081656895,0,0,0,0.285906176706625,0,0,0,0,97.8060294849534,37.387346483575,51.8444746360569,0.860454717640555,0,0,0,6.18588545068935,0,0,0,0,0,1.29485767437579,0,1.1598144313382,3.88568794447312,0,0.198950775161368,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.257831551894309,0,56.2444906607821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0,72.0730858825315,0,0.387533459016037,1.1794195716213,0,0,0,202.258858796277,46.2014956465129,169.525117437717,44.6829339596374,6.32054677437425,0,0,0,0,2.34640942403454,1.34465588601153,22.7861859856814,0.665756774185513,2.21401172950129,0 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| ||
|short_description=p1@TGM1 | |short_description=p1@TGM1 | ||
}} | }} |
Latest revision as of 14:11, 19 September 2015
Short description: | p1@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGM1_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | 0bp_to_ENST00000544573_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | B4DWR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.27e-20 | 42 |
respiratory epithelial cell | 5.61e-18 | 13 |
acinar cell | 8.38e-14 | 5 |
endodermal cell | 8.00e-13 | 58 |
protein secreting cell | 2.02e-11 | 6 |
general ecto-epithelial cell | 9.72e-11 | 14 |
epithelial cell of tracheobronchial tree | 1.94e-10 | 9 |
epithelial cell of lower respiratory tract | 1.94e-10 | 9 |
glandular epithelial cell | 2.22e-10 | 9 |
acinar cell of salivary gland | 3.52e-09 | 3 |
bronchial epithelial cell | 4.35e-09 | 3 |
epithelial cell | 8.43e-09 | 253 |
duct epithelial cell | 1.06e-08 | 3 |
branched duct epithelial cell | 1.06e-08 | 3 |
tracheal epithelial cell | 1.06e-08 | 3 |
tracheoblast | 1.06e-08 | 3 |
placental epithelial cell | 3.30e-08 | 3 |
epithelial cell of alimentary canal | 2.16e-07 | 20 |
stratified squamous epithelial cell | 4.93e-07 | 6 |
keratin accumulating cell | 4.93e-07 | 6 |
stratified epithelial cell | 4.93e-07 | 6 |
keratinizing barrier epithelial cell | 4.93e-07 | 6 |
epithelial fate stem cell | 4.93e-07 | 6 |
stratified epithelial stem cell | 4.93e-07 | 6 |
surface ectodermal cell | 4.93e-07 | 6 |
epidermal cell | 5.99e-07 | 9 |
corneal epithelial cell | 7.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.12e-13 | 74 |
endoderm-derived structure | 5.22e-11 | 160 |
endoderm | 5.22e-11 | 160 |
presumptive endoderm | 5.22e-11 | 160 |
tracheobronchial tree | 3.00e-10 | 15 |
lower respiratory tract | 3.00e-10 | 15 |
respiratory tract | 1.87e-09 | 54 |
trachea | 2.44e-09 | 7 |
respiratory airway | 2.44e-09 | 7 |
lower respiratory tract epithelium | 4.35e-09 | 3 |
epithelium of bronchus | 4.35e-09 | 3 |
oral opening | 1.76e-08 | 22 |
thoracic segment organ | 3.19e-08 | 35 |
surface structure | 7.45e-08 | 99 |
mouth | 1.98e-07 | 29 |
stomodeum | 1.98e-07 | 29 |
thoracic cavity element | 3.60e-07 | 34 |
thoracic cavity | 3.60e-07 | 34 |