FFCP PHASE1:Hg19::chr17:48265299..48265317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48265299..48265317,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48265299..48265317,+ | |description=CAGE_peak_at_chr17:48265299..48265317,+ | ||
|id=chr17:48265299..48265317,+ | |id=chr17:48265299..48265317,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.50e-36!180;CL:0000057!1.53e-27!75;CL:0000048!1.34e-15!430;CL:0000723!1.06e-14!436;CL:0000034!1.26e-14!444;CL:0000183!2.39e-13!59;CL:0000144!2.67e-12!625;CL:0000680!1.04e-11!57;CL:0000056!1.04e-11!57;CL:0000355!1.04e-11!57;CL:0002371!1.10e-11!591;CL:0000187!1.24e-11!54;CL:0002334!2.83e-10!12;CL:0002320!5.64e-10!365;CL:0000192!2.56e-09!42;CL:0000514!2.56e-09!42;CL:0000393!2.64e-09!60;CL:0000211!2.64e-09!60;CL:0002620!1.27e-08!23;CL:0000134!4.01e-08!358;CL:0000548!9.24e-08!679;CL:0000004!9.24e-08!679;CL:0000255!9.24e-08!679;CL:0000219!1.71e-07!390;CL:0000012!1.82e-07!682;CL:0000630!6.31e-07!9 | |ontology_enrichment_celltype=CL:0000055!4.50e-36!180;CL:0000057!1.53e-27!75;CL:0000048!1.34e-15!430;CL:0000723!1.06e-14!436;CL:0000034!1.26e-14!444;CL:0000183!2.39e-13!59;CL:0000144!2.67e-12!625;CL:0000680!1.04e-11!57;CL:0000056!1.04e-11!57;CL:0000355!1.04e-11!57;CL:0002371!1.10e-11!591;CL:0000187!1.24e-11!54;CL:0002334!2.83e-10!12;CL:0002320!5.64e-10!365;CL:0000192!2.56e-09!42;CL:0000514!2.56e-09!42;CL:0000393!2.64e-09!60;CL:0000211!2.64e-09!60;CL:0002620!1.27e-08!23;CL:0000134!4.01e-08!358;CL:0000548!9.24e-08!679;CL:0000004!9.24e-08!679;CL:0000255!9.24e-08!679;CL:0000219!1.71e-07!390;CL:0000012!1.82e-07!682;CL:0000630!6.31e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.40e-13;12!CL:0000134;2.45e-12;55!CL:0000048;2.03e-10;58!CL:0002569;3.69e-09;6!CL:0000057;4.40e-09;73!CL:0000349;4.62e-09;19!CL:0002320;6.80e-09;188!CL:0000723;1.46e-08;61!CL:0002570;2.16e-08;8!CL:0000034;2.89e-08;69!CL:0002620;4.12e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.03e-25,76;CL:0000048,1.44e-17,427;CL:0000723,6.62e-17,433;CL:0000034,4.73e-16,441;CL:0002320,1.65e-14,361;CL:0002334,1.79e-13,12;CL:0000134,6.48e-13,354;CL:0000219,1.13e-10,386;CL:0002569,2.51e-09,6;CL:0000349,3.21e-09,19;CL:0002570,3.09e-08,8;CL:0002620,4.03e-08,23;CL:0000136,6.96e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.31e-07;5!DOID:450;2.31e-07;5!DOID:66;2.31e-07;5!DOID:423;2.31e-07;5!DOID:0080000;2.31e-07;5!DOID:11722;2.31e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.65e-07,5;DOID:450,1.65e-07,5;DOID:66,1.65e-07,5;DOID:423,1.65e-07,5;DOID:0080000,1.65e-07,5;DOID:11722,1.65e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.24e-12!83;UBERON:0002329!1.24e-12!83;UBERON:0003077!1.24e-12!83;UBERON:0003059!1.24e-12!83;UBERON:0007282!1.24e-12!83;UBERON:0009618!1.24e-12!83;UBERON:0007285!1.24e-12!83;UBERON:0001134!4.92e-12!61;UBERON:0002036!4.92e-12!61;UBERON:0003082!4.92e-12!61;UBERON:0002385!3.08e-11!63;UBERON:0001015!3.08e-11!63;UBERON:0000383!3.08e-11!63;UBERON:0004290!5.23e-11!70;UBERON:0002384!5.94e-10!375;UBERON:0005256!5.76e-09!143;UBERON:0000486!5.82e-09!82;UBERON:0003102!1.87e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!1.24e-12!83;UBERON:0002329!1.24e-12!83;UBERON:0003077!1.24e-12!83;UBERON:0003059!1.24e-12!83;UBERON:0007282!1.24e-12!83;UBERON:0009618!1.24e-12!83;UBERON:0007285!1.24e-12!83;UBERON:0001134!4.92e-12!61;UBERON:0002036!4.92e-12!61;UBERON:0003082!4.92e-12!61;UBERON:0002385!3.08e-11!63;UBERON:0001015!3.08e-11!63;UBERON:0000383!3.08e-11!63;UBERON:0004290!5.23e-11!70;UBERON:0002384!5.94e-10!375;UBERON:0005256!5.76e-09!143;UBERON:0000486!5.82e-09!82;UBERON:0003102!1.87e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.09e-10;7!UBERON:0009142;1.09e-10;7!UBERON:0004457;3.41e-10;9!UBERON:0000042;3.41e-10;9!UBERON:0003422;3.69e-09;6!UBERON:0003688;4.04e-09;6!UBERON:0002358;4.04e-09;6!UBERON:0003684;4.04e-09;6!UBERON:0001178;4.04e-09;6!UBERON:0002384;5.42e-09;198!UBERON:0001013;5.49e-09;14!UBERON:0000478;6.97e-08;24!UBERON:0002331;6.36e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-14,371;UBERON:0003422,2.51e-09,6;UBERON:0003688,5.49e-09,6;UBERON:0002358,5.49e-09,6;UBERON:0003684,5.49e-09,6;UBERON:0001178,5.49e-09,6;UBERON:0001013,6.26e-09,14;UBERON:0000478,5.07e-08,24;UBERON:0004457,4.02e-07,12;UBERON:0000042,4.02e-07,12;UBERON:0002331,4.80e-07,10;UBERON:0000358,4.80e-07,10;UBERON:0000307,4.80e-07,10;UBERON:0000091,4.80e-07,10;UBERON:0000087,4.80e-07,10;UBERON:0007010,4.80e-07,10;UBERON:0007806,4.80e-07,10;UBERON:0008780,4.80e-07,10;UBERON:0005728,4.80e-07,10 | |||
|phase1_expression=3.63356758541113,3.8538094300377,2.96004248601539,2.00146596706261,4.46961094427288,3.48935409640147,7.59899634504932,0.631719873426831,0,0,1.39560233594486,0,1.84636884759917,1.23766352960047,0.331397375727916,2.01697543935533,0,0,0.975865597581014,0.984968464614303,2.44800829493104,0.940364164434263,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,3.19656404608826,7.59022220007589,0.50133791063589,3.91085601194224,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,7.45457927542978,1.8994576749687,2.25095607382472,14.0549944166919,0.354668382198357,1.68203280042692,0,7.89336154934912,0.622422070799533,0.67355336034844,0.163461903113459,0.908144565869588,0,0.468642863667593,0.312160076830321,0,0.597794722207204,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,9.50402285825643,8.15980866619238,0,2.87447256726495,0.168336113954066,0.125118519871964,0,2.19488810440419,5.21029252858333,4.6573798261045,1.58805056424029,6.81680615617675,2.77624605464138,1.90738711043606,9.30282397861647,1.23663035086127,7.21393512127762,2.97786970130544,7.25738228637445,1.26668106709558,5.3011092591264,1.10459878370759,0.80823028409406,8.87523981291536,0.806016785821122,2.03472710772585,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,10.2918550110862,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,4.20725321410337,2.8810180793198,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0.66004457238855,1.68053230485111,3.57656445851882,0,3.98907174877306,6.24044621468197,2.05765899409714,2.83698264046557,0.799266537048298,3.14551586047925,12.4802969240032,1.64648067356154,2.28015329005615,4.97548728239564,4.75171123760058,0.301439377059586,0,0.099972991182057,0,0,0,5.5113716763064,9.18895486672911,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,2.50085260529839,0.813795071099207,7.90289273817067,6.0665856191035,5.36188211115378,2.34282829985426,0.601892199455438,0,1.03473071292505,3.98535359121262,0.553107505625109,0.781952530212746,2.74121620447837,6.17658162859541,0,0,0,1.21251028578504,6.65741758041988,4.5358543999452,3.96972492510043,6.1384789315225,7.57782254969299,4.22859192543813,2.04682899626681,10.4555048743345,2.96836132889982,1.3878872442239,7.28003073783821,0.492762936082855,1.03850885836724,2.44041794765914,0,0.200506470303285,0,0.68888668898764,2.1850940160806,2.62248829918848,0,0,0,0,0,0,0,0.215915916102139,0,1.08378575017541,1.50506932156456,0,0,0,0,0,0,0,0,0,0.457847324091717,0.495056999523528,0,0,6.42735719376638,0.290012154876366,0,0.307007349452259,0.413509717453592,0.429680979473094,0.580066775656914,0.767039646744908,5.07482603186403,0,0,0,0.10115778085555,2.78907329578371,15.1109926478707,0,1.23213432070436,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,4.5751246541718,1.27948895655667,0,0,0,1.2591072030832,1.92175920815238,0.589062011728432,0,0,0.421258456238981,0.975267478179181,1.21856744815642,1.05650146756755,1.63799893689583,6.22183900596336,1.13008116620243,0,0.66343897524122,0.438450885253763,1.73632660280006,2.62357900818653,0,0.6196469961995,1.12678241012897,2.15117028306077,4.91245205065606,0,0.709522128141196,4.64436797654861,3.62224382255892,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.227884111694002,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.470284307407084,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53733164907686,2.10341978862502,2.21922344601045,0.378806010550178,1.50940741051545,1.77962244319307,0.686520205190771,1.66354016139563,2.48699520932449,0.443565449968902,0.63718706865481,0,0.776314784381297,1.65882483136342,2.39257543102195,1.5652351854352,4.20721305192212,3.80805212168795,0.406870733204662,0.545545977607678,1.28892668450986,1.39210127963548,2.78667122089031,0,4.12074846219351,3.70424437642511,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0.73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| ||
|short_description=p@chr17:48265299..48265317,+ | |short_description=p@chr17:48265299..48265317,+ | ||
}} | }} |
Latest revision as of 18:33, 25 July 2015
Short description: | p@chr17:48265299..48265317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48265299..48265317, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.03e-25 | 76 |
multi fate stem cell | 1.44e-17 | 427 |
somatic stem cell | 6.62e-17 | 433 |
stem cell | 4.73e-16 | 441 |
connective tissue cell | 1.65e-14 | 361 |
preadipocyte | 1.79e-13 | 12 |
mesenchymal cell | 6.48e-13 | 354 |
motile cell | 1.13e-10 | 386 |
mesenchymal stem cell of umbilical cord | 2.51e-09 | 6 |
extraembryonic cell | 3.21e-09 | 19 |
mesenchymal stem cell of adipose | 3.09e-08 | 8 |
skin fibroblast | 4.03e-08 | 23 |
fat cell | 6.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.32e-14 | 371 |
mesenchyme of umbilical cord | 2.51e-09 | 6 |
omentum | 5.49e-09 | 6 |
peritoneum | 5.49e-09 | 6 |
abdominal cavity | 5.49e-09 | 6 |
visceral peritoneum | 5.49e-09 | 6 |
adipose tissue | 6.26e-09 | 14 |
extraembryonic structure | 5.07e-08 | 24 |
cavity lining | 4.02e-07 | 12 |
serous membrane | 4.02e-07 | 12 |
umbilical cord | 4.80e-07 | 10 |
blastocyst | 4.80e-07 | 10 |
blastula | 4.80e-07 | 10 |
bilaminar disc | 4.80e-07 | 10 |
inner cell mass | 4.80e-07 | 10 |
cleaving embryo | 4.80e-07 | 10 |
connecting stalk | 4.80e-07 | 10 |
inner cell mass derived epiblast | 4.80e-07 | 10 |
extraembryonic mesoderm | 4.80e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.65e-07 | 5 |
myotonic disease | 1.65e-07 | 5 |
muscle tissue disease | 1.65e-07 | 5 |
myopathy | 1.65e-07 | 5 |
muscular disease | 1.65e-07 | 5 |
myotonic dystrophy | 1.65e-07 | 5 |