FFCP PHASE1:Hg19::chr18:73967189..73967200,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:73967189..73967200,-
|short_description=p@chr18:73967189..73967200,-
|description=CAGE_peak_at_chr18:73967189..73967200,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:73967189..73967200,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr18:73967189..73967200,- | |||
|id=chr18:73967189..73967200,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;3.36e-14;6!CL:0000081;3.56e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,3.04e-14,6;CL:0000081,3.37e-08,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.85e-15!57;UBERON:0005068!1.85e-15!57;UBERON:0006241!1.85e-15!57;UBERON:0007135!1.85e-15!57;UBERON:0002616!9.59e-15!59;UBERON:0000955!4.86e-14!69;UBERON:0006238!4.86e-14!69;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0005743!1.97e-13!86;UBERON:0001017!3.98e-13!82;UBERON:0007023!1.13e-12!115;UBERON:0003075!1.44e-12!86;UBERON:0007284!1.44e-12!86;UBERON:0001869!1.46e-12!32;UBERON:0002780!4.45e-12!41;UBERON:0001890!4.45e-12!41;UBERON:0006240!4.45e-12!41;UBERON:0002346!1.02e-11!90;UBERON:0003080!1.06e-11!42;UBERON:0001893!1.22e-11!34;UBERON:0000073!1.55e-11!94;UBERON:0001016!1.55e-11!94;UBERON:0002791!1.73e-10!33;UBERON:0001950!2.09e-09!20;UBERON:0000033!4.93e-09!123;UBERON:0003056!5.59e-09!61;UBERON:0000956!6.40e-09!25;UBERON:0000203!6.40e-09!25;UBERON:0002619!2.05e-08!22;UBERON:0000153!2.66e-08!129;UBERON:0007811!2.66e-08!129;UBERON:0001872!4.58e-08!5;UBERON:0000988!6.58e-08!3;UBERON:0002298!4.41e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.54e-21;1!UBERON:0009842;2.54e-21;1!UBERON:0003704;2.54e-21;1!UBERON:0001171;2.54e-21;1!UBERON:0001172;2.54e-21;1!UBERON:0007195;6.31e-21;1!UBERON:0003422;3.36e-14;6!UBERON:0003104;2.59e-12;7!UBERON:0009142;2.59e-12;7!UBERON:0002331;6.67e-09;10!UBERON:0001280;5.36e-08;3!UBERON:0004647;5.36e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.88e-21,1;UBERON:0009842,1.88e-21,1;UBERON:0003704,1.88e-21,1;UBERON:0001171,1.88e-21,1;UBERON:0001172,1.88e-21,1;UBERON:0007195,7.72e-21,1;UBERON:0003422,3.04e-14,6;UBERON:0002331,6.28e-09,10;UBERON:0000358,6.28e-09,10;UBERON:0000307,6.28e-09,10;UBERON:0000091,6.28e-09,10;UBERON:0000087,6.28e-09,10;UBERON:0007010,6.28e-09,10;UBERON:0007806,6.28e-09,10;UBERON:0008780,6.28e-09,10;UBERON:0005728,6.28e-09,10;UBERON:0001280,4.84e-08,3;UBERON:0004647,4.84e-08,3;UBERON:0005171,4.84e-08,3 | |||
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| ||
|short_description=p@chr18:73967189..73967200,- | |||
}} | }} |
Latest revision as of 02:10, 26 July 2015
Short description: | p@chr18:73967189..73967200, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:73967189..73967200, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 3.04e-14 | 6 |
blood cell | 3.37e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.88e-21 | 1 |
acinus | 1.88e-21 | 1 |
intrahepatic bile duct | 1.88e-21 | 1 |
portal lobule | 1.88e-21 | 1 |
hepatic acinus | 1.88e-21 | 1 |
stroma of bone marrow | 7.72e-21 | 1 |
mesenchyme of umbilical cord | 3.04e-14 | 6 |
umbilical cord | 6.28e-09 | 10 |
blastocyst | 6.28e-09 | 10 |
blastula | 6.28e-09 | 10 |
bilaminar disc | 6.28e-09 | 10 |
inner cell mass | 6.28e-09 | 10 |
cleaving embryo | 6.28e-09 | 10 |
connecting stalk | 6.28e-09 | 10 |
inner cell mass derived epiblast | 6.28e-09 | 10 |
extraembryonic mesoderm | 6.28e-09 | 10 |
liver parenchyma | 4.84e-08 | 3 |
liver lobule | 4.84e-08 | 3 |
hepatic duct | 4.84e-08 | 3 |