FFCP PHASE1:Hg19::chr1:11907395..11907410,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4878 | |EntrezGene=4878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7939 | |HGNC=7939 | ||
|TSSclassifier=strong | |||
|UniProt=P01160 | |UniProt=P01160 | ||
|association_with_transcript=-130bp_to_K02044_5end | |association_with_transcript=-130bp_to_K02044_5end | ||
|cluster_id=chr1:11907395..11907410,- | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_4_at_NPPA_5end | |description=CAGE_peak_4_at_NPPA_5end | ||
|id=chr1:11907395..11907410,- | |id=chr1:11907395..11907410,- | ||
|ontology_enrichment_celltype=CL:0000242!3.27e-10!2;CL:0000068!3.35e-07!3;CL:0000069!3.35e-07!3;CL:0000307!3.35e-07!3;CL:0000377!3.35e-07!3 | |ontology_enrichment_celltype=CL:0000242!3.27e-10!2;CL:0000068!3.35e-07!3;CL:0000069!3.35e-07!3;CL:0000307!3.35e-07!3;CL:0000377!3.35e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.23e-66;1!UBERON:0004140;4.66e-66;1!UBERON:0005062;8.69e-18;4!UBERON:0007284;8.69e-18;4!UBERON:0004872;9.89e-11;7 | |||
|ontology_enrichment_disease=DOID:114!1.18e-36!2;DOID:178!3.25e-19!1;DOID:326!3.25e-19!1;DOID:3978!3.25e-19!1;DOID:3394!3.25e-19!1;DOID:5844!3.25e-19!1;DOID:1287!6.77e-19!4 | |ontology_enrichment_disease=DOID:114!1.18e-36!2;DOID:178!3.25e-19!1;DOID:326!3.25e-19!1;DOID:3978!3.25e-19!1;DOID:3394!3.25e-19!1;DOID:5844!3.25e-19!1;DOID:1287!6.77e-19!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004151!6.02e-55!3;UBERON:0007100!2.27e-42!27;UBERON:0002081!1.89e-37!2;UBERON:0002133!2.27e-37!2;UBERON:0003978!2.64e-25!3;UBERON:0009751!2.64e-25!3;UBERON:0000946!2.64e-25!3;UBERON:0002523!2.64e-25!3;UBERON:0005983!2.64e-25!3;UBERON:0002165!2.64e-25!3;UBERON:0002062!2.64e-25!3;UBERON:0007280!2.64e-25!3;UBERON:0003103!1.14e-20!69;UBERON:0002079!8.95e-20!1;UBERON:0002135!1.08e-19!1;UBERON:0002134!1.56e-19!1;UBERON:0005208!1.56e-19!1;UBERON:0005946!1.56e-19!1;UBERON:0005965!1.56e-19!1;UBERON:0002078!1.56e-19!1;UBERON:0002084!2.25e-19!1;UBERON:0002082!2.25e-19!1;UBERON:0004706!2.25e-19!1;UBERON:0000948!4.16e-19!24;UBERON:0005498!4.16e-19!24;UBERON:0004140!4.16e-19!24;UBERON:0009881!4.16e-19!24;UBERON:0004141!4.16e-19!24;UBERON:0003084!4.16e-19!24;UBERON:0007005!4.16e-19!24;UBERON:0004139!4.16e-19!24;UBERON:0004291!4.16e-19!24;UBERON:0001009!8.04e-10!113;UBERON:0007023!2.14e-07!115;UBERON:0004145!2.19e-07!3;UBERON:0002300!2.47e-07!3 | |ontology_enrichment_uberon=UBERON:0004151!6.02e-55!3;UBERON:0007100!2.27e-42!27;UBERON:0002081!1.89e-37!2;UBERON:0002133!2.27e-37!2;UBERON:0003978!2.64e-25!3;UBERON:0009751!2.64e-25!3;UBERON:0000946!2.64e-25!3;UBERON:0002523!2.64e-25!3;UBERON:0005983!2.64e-25!3;UBERON:0002165!2.64e-25!3;UBERON:0002062!2.64e-25!3;UBERON:0007280!2.64e-25!3;UBERON:0003103!1.14e-20!69;UBERON:0002079!8.95e-20!1;UBERON:0002135!1.08e-19!1;UBERON:0002134!1.56e-19!1;UBERON:0005208!1.56e-19!1;UBERON:0005946!1.56e-19!1;UBERON:0005965!1.56e-19!1;UBERON:0002078!1.56e-19!1;UBERON:0002084!2.25e-19!1;UBERON:0002082!2.25e-19!1;UBERON:0004706!2.25e-19!1;UBERON:0000948!4.16e-19!24;UBERON:0005498!4.16e-19!24;UBERON:0004140!4.16e-19!24;UBERON:0009881!4.16e-19!24;UBERON:0004141!4.16e-19!24;UBERON:0003084!4.16e-19!24;UBERON:0007005!4.16e-19!24;UBERON:0004139!4.16e-19!24;UBERON:0004291!4.16e-19!24;UBERON:0001009!8.04e-10!113;UBERON:0007023!2.14e-07!115;UBERON:0004145!2.19e-07!3;UBERON:0002300!2.47e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.23e-66;1!UBERON:0002135;2.39e-66;1!UBERON:0002081;3.61e-34;2!UBERON:0002133;5.04e-34;2!UBERON:0000948;7.08e-28;22!UBERON:0007100;1.10e-24;25!UBERON:0004151;2.62e-23;3!UBERON:0003978;3.27e-23;3!UBERON:0000946;3.27e-23;3!UBERON:0003103;1.72e-09;61!UBERON:0010313;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.23e-66,1;UBERON:0002135,2.39e-66,1;UBERON:0002081,3.61e-34,2;UBERON:0010227,3.61e-34,2;UBERON:0002133,5.04e-34,2;UBERON:0000948,1.16e-25,24;UBERON:0005498,1.16e-25,24;UBERON:0004140,1.16e-25,24;UBERON:0009881,1.16e-25,24;UBERON:0004141,1.16e-25,24;UBERON:0003084,1.16e-25,24;UBERON:0007005,1.16e-25,24;UBERON:0004139,1.16e-25,24;UBERON:0004291,1.16e-25,24;UBERON:0004151,2.62e-23,3;UBERON:0003978,3.27e-23,3;UBERON:0009751,3.27e-23,3;UBERON:0000946,3.27e-23,3;UBERON:0002523,3.27e-23,3;UBERON:0005983,3.27e-23,3;UBERON:0002165,3.27e-23,3;UBERON:0002062,3.27e-23,3;UBERON:0007280,3.27e-23,3;UBERON:0007100,5.98e-23,27;UBERON:0004797,8.99e-11,7;UBERON:0003103,8.58e-10,68;UBERON:0004872,3.31e-08,83;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
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|short_description=p4@NPPA | |short_description=p4@NPPA | ||
}} | }} |
Latest revision as of 11:15, 16 September 2015
Short description: | p4@NPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NPPA_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -130bp_to_K02044_5end |
EntrezGene: | NPPA |
HGNC: | 7939 |
UniProt: | P01160 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.23e-66 | 1 |
mitral valve | 2.39e-66 | 1 |
cardiac atrium | 3.61e-34 | 2 |
future cardiac atrium | 3.61e-34 | 2 |
atrioventricular valve | 5.04e-34 | 2 |
heart | 1.16e-25 | 24 |
primitive heart tube | 1.16e-25 | 24 |
primary heart field | 1.16e-25 | 24 |
anterior lateral plate mesoderm | 1.16e-25 | 24 |
heart tube | 1.16e-25 | 24 |
heart primordium | 1.16e-25 | 24 |
cardiac mesoderm | 1.16e-25 | 24 |
cardiogenic plate | 1.16e-25 | 24 |
heart rudiment | 1.16e-25 | 24 |
cardiac chamber | 2.62e-23 | 3 |
valve | 3.27e-23 | 3 |
cardiac mesenchyme | 3.27e-23 | 3 |
cardial valve | 3.27e-23 | 3 |
tunica intima | 3.27e-23 | 3 |
heart layer | 3.27e-23 | 3 |
endocardium | 3.27e-23 | 3 |
endocardial cushion | 3.27e-23 | 3 |
presumptive endocardium | 3.27e-23 | 3 |
primary circulatory organ | 5.98e-23 | 27 |
blood vessel layer | 8.99e-11 | 7 |
compound organ | 8.58e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |