FFCP PHASE1:Hg19::chr1:157069495..157069541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440695 | |EntrezGene=440695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33834 | |HGNC=33834 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN32 | |UniProt=Q6ZN32 | ||
|association_with_transcript=58bp_to_ENST00000454449,NM_001004341,uc001fqq.1_5end | |association_with_transcript=58bp_to_ENST00000454449,NM_001004341,uc001fqq.1_5end | ||
|cluster_id=chr1:157069495..157069541,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_2_at_ETV3L_5end | |description=CAGE_peak_2_at_ETV3L_5end | ||
|id=chr1:157069495..157069541,- | |id=chr1:157069495..157069541,- | ||
|ontology_enrichment_celltype=CL:0002057!1.07e-36!42;CL:0000860!7.78e-34!45;CL:0002009!1.34e-25!65;CL:0002194!3.40e-24!63;CL:0000576!3.40e-24!63;CL:0000040!3.40e-24!63;CL:0000559!3.40e-24!63;CL:0000557!6.54e-23!71;CL:0000839!3.49e-21!70;CL:0000766!4.83e-19!76;CL:0000738!1.54e-17!140;CL:0002031!1.58e-16!124;CL:0000763!3.72e-16!112;CL:0000049!3.72e-16!112;CL:0002087!4.49e-16!119;CL:0002032!1.18e-13!165;CL:0000837!1.18e-13!165;CL:0000037!8.94e-13!172;CL:0000566!8.94e-13!172;CL:0000988!1.15e-12!182;CL:0000453!4.93e-11!5;CL:0002322!1.07e-10!5 | |ontology_enrichment_celltype=CL:0002057!1.07e-36!42;CL:0000860!7.78e-34!45;CL:0002009!1.34e-25!65;CL:0002194!3.40e-24!63;CL:0000576!3.40e-24!63;CL:0000040!3.40e-24!63;CL:0000559!3.40e-24!63;CL:0000557!6.54e-23!71;CL:0000839!3.49e-21!70;CL:0000766!4.83e-19!76;CL:0000738!1.54e-17!140;CL:0002031!1.58e-16!124;CL:0000763!3.72e-16!112;CL:0000049!3.72e-16!112;CL:0002087!4.49e-16!119;CL:0002032!1.18e-13!165;CL:0000837!1.18e-13!165;CL:0000037!8.94e-13!172;CL:0000566!8.94e-13!172;CL:0000988!1.15e-12!182;CL:0000453!4.93e-11!5;CL:0002322!1.07e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-16;33!CL:0002057;1.80e-16;33!CL:0000453;8.29e-11;5!CL:0000473;1.53e-10;39!CL:0000234;1.53e-10;39!CL:0000576;6.25e-08;48!CL:0001014;2.05e-07;2!CL:0001016;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.50e-14,42;CL:0002057,5.50e-14,42;CL:0000473,3.62e-12,48;CL:0000234,3.62e-12,48;CL:0002009,4.70e-12,61;CL:0000557,6.42e-11,67;CL:0000453,7.51e-11,5;CL:0000738,1.23e-09,136;CL:0002194,1.29e-09,59;CL:0000576,1.29e-09,59;CL:0000040,1.29e-09,59;CL:0000559,1.29e-09,59;CL:0002031,4.23e-09,120;CL:0000839,1.51e-08,66;CL:0000988,1.51e-08,177;CL:0000763,3.18e-08,108;CL:0000049,3.18e-08,108;CL:0002032,6.30e-08,161;CL:0000837,6.30e-08,161;CL:0000766,8.56e-08,72;CL:0002087,1.08e-07,115;CL:0000037,1.54e-07,168;CL:0001014,1.75e-07,2;CL:0001016,1.75e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;9.13e-14;1!DOID:0050177;9.13e-14;1!DOID:0050427;9.13e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.58e-14,1;DOID:0050177,8.58e-14,1;DOID:0050427,8.58e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-19!80;UBERON:0001474!1.83e-19!86;UBERON:0002390!1.38e-18!102;UBERON:0003061!1.38e-18!102;UBERON:0002193!1.21e-17!112;UBERON:0004765!1.29e-15!101;UBERON:0001434!1.29e-15!101;UBERON:0002405!1.52e-15!115;UBERON:0002204!1.19e-08!167;UBERON:0001905!1.56e-08!2;UBERON:0002757!1.56e-08!2;UBERON:0010134!1.56e-08!2;UBERON:0002784!1.56e-08!2;UBERON:0005408!1.56e-08!2;UBERON:0001899!1.56e-08!2;UBERON:0003081!5.70e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.24e-19!80;UBERON:0001474!1.83e-19!86;UBERON:0002390!1.38e-18!102;UBERON:0003061!1.38e-18!102;UBERON:0002193!1.21e-17!112;UBERON:0004765!1.29e-15!101;UBERON:0001434!1.29e-15!101;UBERON:0002405!1.52e-15!115;UBERON:0002204!1.19e-08!167;UBERON:0001905!1.56e-08!2;UBERON:0002757!1.56e-08!2;UBERON:0010134!1.56e-08!2;UBERON:0002784!1.56e-08!2;UBERON:0005408!1.56e-08!2;UBERON:0001899!1.56e-08!2;UBERON:0003081!5.70e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.29e-26;2!UBERON:0002757;1.29e-26;2!UBERON:0010134;1.29e-26;2!UBERON:0005408;1.29e-26;2!UBERON:0001899;1.29e-26;2!UBERON:0003296;8.06e-14;4!UBERON:0010133;8.06e-14;4!UBERON:0002784;8.06e-14;4!UBERON:0001894;2.78e-08;7!UBERON:0002370;2.05e-07;2!UBERON:0005058;2.05e-07;2!UBERON:0009113;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.29e-26,2;UBERON:0002757,1.29e-26,2;UBERON:0010134,1.29e-26,2;UBERON:0005408,1.29e-26,2;UBERON:0001899,1.29e-26,2;UBERON:0003296,8.06e-14,4;UBERON:0010133,8.06e-14,4;UBERON:0002784,8.06e-14,4;UBERON:0002390,2.52e-11,98;UBERON:0003061,2.52e-11,98;UBERON:0002193,3.58e-10,108;UBERON:0002405,1.10e-09,93;UBERON:0002371,1.52e-09,76;UBERON:0001474,8.55e-09,82;UBERON:0001894,2.78e-08,7;UBERON:0006222,2.78e-08,7;UBERON:0004765,6.03e-08,90;UBERON:0001434,4.49e-07,100 | |||
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| ||
|short_description=p2@ETV3L | |short_description=p2@ETV3L | ||
}} | }} | ||
Latest revision as of 18:48, 17 September 2015
| Short description: | p2@ETV3L |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ETV3L_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | 58bp_to_ENST00000454449, NM_001004341, uc001fqq.1_5end |
| EntrezGene: | ETV3L |
| HGNC: | 33834 |
| UniProt: | Q6ZN32 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 5.50e-14 | 42 |
| CD14-positive, CD16-negative classical monocyte | 5.50e-14 | 42 |
| defensive cell | 3.62e-12 | 48 |
| phagocyte | 3.62e-12 | 48 |
| macrophage dendritic cell progenitor | 4.70e-12 | 61 |
| granulocyte monocyte progenitor cell | 6.42e-11 | 67 |
| Langerhans cell | 7.51e-11 | 5 |
| leukocyte | 1.23e-09 | 136 |
| monopoietic cell | 1.29e-09 | 59 |
| monocyte | 1.29e-09 | 59 |
| monoblast | 1.29e-09 | 59 |
| promonocyte | 1.29e-09 | 59 |
| hematopoietic lineage restricted progenitor cell | 4.23e-09 | 120 |
| myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
| hematopoietic cell | 1.51e-08 | 177 |
| myeloid cell | 3.18e-08 | 108 |
| common myeloid progenitor | 3.18e-08 | 108 |
| hematopoietic oligopotent progenitor cell | 6.30e-08 | 161 |
| hematopoietic multipotent progenitor cell | 6.30e-08 | 161 |
| myeloid leukocyte | 8.56e-08 | 72 |
| nongranular leukocyte | 1.08e-07 | 115 |
| hematopoietic stem cell | 1.54e-07 | 168 |
| CD1a-positive Langerhans cell | 1.75e-07 | 2 |
| immature CD1a-positive Langerhans cell | 1.75e-07 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 1.29e-26 | 2 |
| regional part of epithalamus | 1.29e-26 | 2 |
| secretory circumventricular organ | 1.29e-26 | 2 |
| circumventricular organ | 1.29e-26 | 2 |
| epithalamus | 1.29e-26 | 2 |
| gland of diencephalon | 8.06e-14 | 4 |
| neuroendocrine gland | 8.06e-14 | 4 |
| regional part of diencephalon | 8.06e-14 | 4 |
| hematopoietic system | 2.52e-11 | 98 |
| blood island | 2.52e-11 | 98 |
| hemolymphoid system | 3.58e-10 | 108 |
| immune system | 1.10e-09 | 93 |
| bone marrow | 1.52e-09 | 76 |
| bone element | 8.55e-09 | 82 |
| diencephalon | 2.78e-08 | 7 |
| future diencephalon | 2.78e-08 | 7 |
| skeletal element | 6.03e-08 | 90 |
| skeletal system | 4.49e-07 | 100 |
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 8.58e-14 | 1 |
| monogenic disease | 8.58e-14 | 1 |
| xeroderma pigmentosum | 8.58e-14 | 1 |