FFCP PHASE1:Hg19::chr19:1077393..1077396,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1077393..1077396,+
|short_description=p5@HMHA1
|description=CAGE_peak_5_at_HMHA1_5end
|association_with_transcript=-45bp_to_uc002lrc.1_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23526 | |EntrezGene=23526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |HGNC=17102 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc002lrc.1_5end | |||
|cluster_id=chr19:1077393..1077396,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_HMHA1_5end | |||
|id=chr19:1077393..1077396,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.47e-59!140;CL:0002087!9.21e-52!119;CL:0002031!6.10e-50!124;CL:0000037!6.59e-48!172;CL:0000566!6.59e-48!172;CL:0002032!4.04e-45!165;CL:0000837!4.04e-45!165;CL:0000988!7.19e-44!182;CL:0000838!1.36e-31!52;CL:0000542!1.25e-30!53;CL:0000051!1.25e-30!53;CL:0000766!1.17e-22!76;CL:0000084!6.55e-20!25;CL:0000827!6.55e-20!25;CL:0000557!1.94e-19!71;CL:0002057!4.62e-19!42;CL:0000791!5.36e-19!18;CL:0000789!5.36e-19!18;CL:0002420!5.36e-19!18;CL:0002419!5.36e-19!18;CL:0000790!5.36e-19!18;CL:0000839!7.41e-19!70;CL:0000860!9.42e-19!45;CL:0002009!1.42e-18!65;CL:0002194!1.58e-18!63;CL:0000576!1.58e-18!63;CL:0000040!1.58e-18!63;CL:0000559!1.58e-18!63;CL:0000763!5.30e-17!112;CL:0000049!5.30e-17!112;CL:0000625!1.61e-12!11;CL:0000945!1.02e-10!24;CL:0000826!1.02e-10!24;CL:0000236!7.98e-10!14;CL:0000134!9.22e-08!358;CL:0000624!2.08e-07!6;CL:0002320!4.72e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.75e-42;18!CL:0000789;1.75e-42;18!CL:0002419;1.75e-42;18!CL:0000084;4.72e-29;25!CL:0000625;4.18e-27;11!CL:0000542;6.73e-22;53!CL:0000624;3.17e-15;6!CL:0000236;1.52e-12;13!CL:0002087;9.29e-12;104!CL:0000898;2.28e-08;3!CL:0000623;3.40e-08;3!CL:0000226;9.25e-08;3!CL:0000842;9.25e-08;3!CL:0000945;2.10e-07;24!CL:0000767;4.27e-07;3!CL:0000738;5.92e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.63e-42,18;CL:0000789,2.63e-42,18;CL:0002420,2.63e-42,18;CL:0002419,2.63e-42,18;CL:0000790,2.63e-42,18;CL:0000838,5.93e-37,52;CL:0000542,4.44e-36,53;CL:0000051,4.44e-36,53;CL:0000738,1.46e-32,136;CL:0002087,2.20e-32,115;CL:0000084,6.26e-29,25;CL:0000827,6.26e-29,25;CL:0000625,4.11e-27,11;CL:0002031,8.17e-26,120;CL:0000037,6.99e-25,168;CL:0000988,6.51e-23,177;CL:0002032,1.53e-21,161;CL:0000837,1.53e-21,161;CL:0000624,3.43e-15,6;CL:0000236,1.32e-11,14;CL:0000898,2.61e-08,3;CL:0000623,4.04e-08,3;CL:0000825,4.04e-08,3;CL:0000226,9.06e-08,3;CL:0000842,9.06e-08,3;CL:0000945,2.03e-07,24;CL:0000826,2.03e-07,24;CL:0000767,3.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.75e-42;18!CL:0000051;6.73e-22;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.57e-26!102;UBERON:0003061!2.57e-26!102;UBERON:0002193!7.81e-25!112;UBERON:0002371!2.53e-15!80;UBERON:0001474!2.64e-14!86;UBERON:0002405!2.14e-13!115;UBERON:0004765!5.77e-11!101;UBERON:0001434!5.77e-11!101;UBERON:0000178!2.36e-08!15;UBERON:0000179!2.36e-08!15;UBERON:0000463!2.36e-08!15;UBERON:0007023!7.28e-07!115;UBERON:0004177!9.63e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-14;15!UBERON:0000179;2.10e-14;15!UBERON:0000463;2.10e-14;15!UBERON:0002390;2.46e-10;32!UBERON:0002193;7.28e-08;42!UBERON:0004177;3.07e-07;5!UBERON:0005057;3.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.62e-14,15;UBERON:0000179,2.62e-14,15;UBERON:0000463,2.62e-14,15;UBERON:0002193,1.55e-11,108;UBERON:0002390,2.52e-11,98;UBERON:0003061,2.52e-11,98;UBERON:0004177,4.24e-11,7;UBERON:0005057,4.24e-11,7;UBERON:0002370,1.32e-09,4;UBERON:0005058,1.32e-09,4;UBERON:0009113,1.32e-09,4;UBERON:0003295,1.32e-09,4;UBERON:0005562,1.32e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.328402357799783,0.314843125254717,1.18009283054671,2.30297638858328,1.85779347979291,0,0,0,0.0774672005803016,0.284338464974843,0,3.32397245119126,3.20871115952227,3.25516306073778,1.11957737119962,0.971680998056939,0.257575567634187,0.872389432677388,1.13362783106643,0.970336244751265,0.232429036905685,1.23350366406548,0.929119112685311,0.575384784644301,1.2808035326455,0,0.689491361473237,0.645484683583826,0,0.752969358170419,1.09162460023138,0.449446968890169,0.918251677112708,0.641858054152187,1.27867425159808,0.659702600373432,0.797854630486527,0,0,0.56738522469114,0,0.75374599577023,1.5644487552606,0.65156653411535,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0,0.419317291016752,1.34794357375794,0.750884464207532,0.964353520182481,0.285012743741249,0.39783335439818,0.547992461293902,1.75996244461323,3.82297027883492,1.77901850772711,4.69403244823158,2.00197993518006,2.29900975981793,4.62731410949403,0.954053754535364,2.84606484554724,0.587237189370939,1.14681968437569,0,0,0,11.2124568964885,9.82526906872912,5.96244347098577,3.8452893939856,4.23698946623668,3.78758244587787,1.94826728407911,5.68193330114385,5.30290633454707,4.65221178625604,2.43723477388514,10.3753968977797,13.2660534511076,11.5106533222573,15.7519510137934,4.63684937176084,20.3152591532023,12.5744189202165,16.7256838087963,7.3651072753418,13.0294967824653,9.27794102803101,5.56643322442906,13.6983128159362,8.46408490013344,11.4054245333805,6.92645547757755,5.11946444617674,9.99445812418767,11.1285308460688,13.9591759476578,6.24980903996671,7.75576567772171,11.1514790989755,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.324547393654683,0.870648686496336,1.19662164466979,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.00876629594175,4.53170748464433,7.33133754522359,5.00537841491019,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,6.25571182373989,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.941438007767792,0,0,0,0,2.02979043692868,4.58782324285425,7.40541343326411,8.33811214102261,16.0431286503616,0.648473311192717,1.08006287447623,7.9312517629427,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0.478278818186467,0.399158742865633,0.766021480529467,1.05836791361941,0,0,0,0,0,0.338583555603207,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0,0,0.176915129006678,1.83309043480088,0.296521128680622,0,0,0.134802265961354,0,0,0.364909578431332,0,0.242780379534093,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,1.9846640872478,0.197611631897944,1.09613338542806,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.531459361253452,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,1.3451348888753,0.606965604236632,0,0.0887023701626388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| ||
|short_description=p5@HMHA1 | |||
}} | }} |
Latest revision as of 02:41, 25 September 2015
Short description: | p5@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMHA1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -45bp_to_uc002lrc.1_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.63e-42 | 18 |
alpha-beta T cell | 2.63e-42 | 18 |
immature T cell | 2.63e-42 | 18 |
mature T cell | 2.63e-42 | 18 |
immature alpha-beta T cell | 2.63e-42 | 18 |
lymphoid lineage restricted progenitor cell | 5.93e-37 | 52 |
lymphocyte | 4.44e-36 | 53 |
common lymphoid progenitor | 4.44e-36 | 53 |
leukocyte | 1.46e-32 | 136 |
nongranular leukocyte | 2.20e-32 | 115 |
T cell | 6.26e-29 | 25 |
pro-T cell | 6.26e-29 | 25 |
CD8-positive, alpha-beta T cell | 4.11e-27 | 11 |
hematopoietic lineage restricted progenitor cell | 8.17e-26 | 120 |
hematopoietic stem cell | 6.99e-25 | 168 |
hematopoietic cell | 6.51e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.53e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-21 | 161 |
CD4-positive, alpha-beta T cell | 3.43e-15 | 6 |
B cell | 1.32e-11 | 14 |
naive T cell | 2.61e-08 | 3 |
natural killer cell | 4.04e-08 | 3 |
pro-NK cell | 4.04e-08 | 3 |
single nucleate cell | 9.06e-08 | 3 |
mononuclear cell | 9.06e-08 | 3 |
lymphocyte of B lineage | 2.03e-07 | 24 |
pro-B cell | 2.03e-07 | 24 |
basophil | 3.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.62e-14 | 15 |
haemolymphatic fluid | 2.62e-14 | 15 |
organism substance | 2.62e-14 | 15 |
hemolymphoid system | 1.55e-11 | 108 |
hematopoietic system | 2.52e-11 | 98 |
blood island | 2.52e-11 | 98 |
hemopoietic organ | 4.24e-11 | 7 |
immune organ | 4.24e-11 | 7 |
thymus | 1.32e-09 | 4 |
hemolymphoid system gland | 1.32e-09 | 4 |
thymic region | 1.32e-09 | 4 |
pharyngeal gland | 1.32e-09 | 4 |
thymus primordium | 1.32e-09 | 4 |