FFCP PHASE1:Hg19::chr2:133027519..133027547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133027519..133027547,- | |||
|coexpression_cluster_id=C2088 | |coexpression_cluster_id=C2088 | ||
|description=CAGE_peak_at_chr2:133027519..133027547,- | |description=CAGE_peak_at_chr2:133027519..133027547,- | ||
|id=chr2:133027519..133027547,- | |id=chr2:133027519..133027547,- | ||
|ontology_enrichment_celltype=CL:0000047!9.50e-09!8;CL:0000039!5.95e-07!7;CL:0000586!5.95e-07!7;CL:0000540!7.86e-07!6;CL:0000031!7.86e-07!6;CL:0000404!7.86e-07!6 | |ontology_enrichment_celltype=CL:0000047!9.50e-09!8;CL:0000039!5.95e-07!7;CL:0000586!5.95e-07!7;CL:0000540!7.86e-07!6;CL:0000031!7.86e-07!6;CL:0000404!7.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.52e-11;6!CL:0000404;1.52e-11;6!CL:0000047;1.36e-09;2!CL:0000039;4.42e-09;7!CL:0000586;4.42e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.24e-18,8;CL:0000540,1.61e-11,6;CL:0000031,1.61e-11,6;CL:0000404,1.61e-11,6;CL:0000039,5.32e-09,7;CL:0000586,5.32e-09,7 | |||
|ontology_enrichment_development_v019=CL:0000031;1.52e-11;6!UBERON:0005062;5.09e-10;4!UBERON:0007284;5.09e-10;4 | |||
|ontology_enrichment_disease=DOID:3095!1.73e-07!22;DOID:2994!1.73e-07!22 | |ontology_enrichment_disease=DOID:3095!1.73e-07!22;DOID:2994!1.73e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.27e-08;22!DOID:2994;7.27e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.28e-08,22;DOID:2994,8.28e-08,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.24e-13;3!UBERON:0000946;3.24e-13;3!UBERON:0002133;4.12e-09;2!UBERON:0003714;4.47e-09;2!UBERON:0003135;7.32e-09;11!UBERON:0002331;9.16e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.87e-13,3;UBERON:0009751,2.87e-13,3;UBERON:0000946,2.87e-13,3;UBERON:0002523,2.87e-13,3;UBERON:0005983,2.87e-13,3;UBERON:0002165,2.87e-13,3;UBERON:0002062,2.87e-13,3;UBERON:0007280,2.87e-13,3;UBERON:0002133,3.65e-09,2;UBERON:0003714,5.47e-09,2;UBERON:0003135,8.54e-09,11;UBERON:0002331,9.16e-07,10;UBERON:0000358,9.16e-07,10;UBERON:0000307,9.16e-07,10;UBERON:0000091,9.16e-07,10;UBERON:0000087,9.16e-07,10;UBERON:0007010,9.16e-07,10;UBERON:0007806,9.16e-07,10;UBERON:0008780,9.16e-07,10;UBERON:0005728,9.16e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47559303686716,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,1.08321545506006,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0,0.444859689486181,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,1.44575660953827,0.50133791063589,0.434539556882471,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,2.24271040056923,0,0,0,0,0,0,0,0,0,0,1.19558944441441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.538168907066586,0,0,0.300091096084402,0,0,0,0.168776332241266,0,1.00973509697646,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.116193942869518,0.207322110030741,0.252320850875628,1.82488679537915,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0.441463099414651,0,0.686271241194102,0,0,0.402115889646523,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.626909658919938,0,0,0.492663237895943,0.088048434013226,0.621984346622316,1.15295962733569,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,8.13102797511883,9.10978977003352,18.5589315066647,0.670065061337395,15.9484687913291,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,2.7757744884478,0.532685175939381,0.164254312027618,1.55776328755086,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0,10.2557800596545,3.21787049690293,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.638063562472921,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.563391205064483,0,0,0,0,4.64436797654861,12.8425008254362,0,0,0.384888450902048,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,2.27858874869665,0.476463550915578,0.822724546172388,0,0,2.37937552888281,0.106824071127473,0,0,0.557409525377156,0,0,0.318852545457645,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0.642352300414798,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.500547425135725,0,0.835218521685727,0,0.270455678475983,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.20453736500431,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,2.2882828526349,0,2.06846023944879,1.16641845353302,0.347249989866585,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,4.84184199214926,0.448788222048861,0.651884231532048,0,0,0,2.04386596391473,0.470940769185074,0.166211681900156,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0.611030144933625,8.30259160305741,4.3247378631276,2.29728288912002,0,0,0,0.729819156862664,0.19566461893209,5.58394872928413,6.70793484843964,0,0,0.126373159256976,1.9542044523884,0.518440956986236,0,0,0,0,0.284609546029793,0,0.347119476670262,0.195984794828755,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0.391102765469606,0,0.213452994739353,0,0,0,0.686379991447858,0,0,0.942776138467182,0,0,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,1.39641200636127,36.4365074178577,13.6395874669595,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,3.05430982083536,3.02586760513914,0.83088067605837,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,0.554645257684261,0.0620964029413835,0.138348634936231,0.249960815924213,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0.607719912354764,0.691292180758654,0.584580926518165,0.531459361253452,0.490696182767533,0,0.245772908753719,0.845248493434508,0,0.213383459388282,0.344429959321631,0,0,0,0,0,0,0.629063767423586,0,0,0.637724760305049,8.42763196961215,1.11728983594649,0,0.0788617450012534,0,0,0.30624547735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| ||
|short_description=p@chr2:133027519..133027547,- | |short_description=p@chr2:133027519..133027547,- | ||
}} | }} |
Latest revision as of 00:24, 29 July 2015
Short description: | p@chr2:133027519..133027547, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133027519..133027547, - |
Coexpression cluster: | C2088_heart_Neurons_Synoviocyte_Saos2_neuroectodermal_penis_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.24e-18 | 8 |
neuron | 1.61e-11 | 6 |
neuroblast | 1.61e-11 | 6 |
electrically signaling cell | 1.61e-11 | 6 |
germ line cell | 5.32e-09 | 7 |
germ cell | 5.32e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
valve | 2.87e-13 | 3 |
cardiac mesenchyme | 2.87e-13 | 3 |
cardial valve | 2.87e-13 | 3 |
tunica intima | 2.87e-13 | 3 |
heart layer | 2.87e-13 | 3 |
endocardium | 2.87e-13 | 3 |
endocardial cushion | 2.87e-13 | 3 |
presumptive endocardium | 2.87e-13 | 3 |
atrioventricular valve | 3.65e-09 | 2 |
neural tissue | 5.47e-09 | 2 |
male reproductive organ | 8.54e-09 | 11 |
umbilical cord | 9.16e-07 | 10 |
blastocyst | 9.16e-07 | 10 |
blastula | 9.16e-07 | 10 |
bilaminar disc | 9.16e-07 | 10 |
inner cell mass | 9.16e-07 | 10 |
cleaving embryo | 9.16e-07 | 10 |
connecting stalk | 9.16e-07 | 10 |
inner cell mass derived epiblast | 9.16e-07 | 10 |
extraembryonic mesoderm | 9.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.28e-08 | 22 |
germ cell cancer | 8.28e-08 | 22 |