FFCP PHASE1:Hg19::chr2:163175088..163175101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64135 | |EntrezGene=64135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18873 | |HGNC=18873 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYX4 | |UniProt=Q9BYX4 | ||
|association_with_transcript=-49bp_to_NM_022168,uc002uce.2,uc002ucf.2_5end | |association_with_transcript=-49bp_to_NM_022168,uc002uce.2,uc002ucf.2_5end | ||
|cluster_id=chr2:163175088..163175101,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_4_at_IFIH1_5end | |description=CAGE_peak_4_at_IFIH1_5end | ||
|id=chr2:163175088..163175101,- | |id=chr2:163175088..163175101,- | ||
|ontology_enrichment_celltype=CL:0000738!8.90e-26!140;CL:0002057!4.42e-25!42;CL:0000860!4.73e-24!45;CL:0002087!1.12e-23!119;CL:0002031!7.93e-22!124;CL:0002009!1.83e-19!65;CL:0002194!2.76e-19!63;CL:0000576!2.76e-19!63;CL:0000040!2.76e-19!63;CL:0000559!2.76e-19!63;CL:0000766!2.77e-18!76;CL:0000988!6.45e-18!182;CL:0000557!1.15e-17!71;CL:0002032!1.27e-17!165;CL:0000837!1.27e-17!165;CL:0000037!1.62e-17!172;CL:0000566!1.62e-17!172;CL:0000839!5.02e-17!70;CL:0000763!1.46e-11!112;CL:0000049!1.46e-11!112;CL:0000945!6.14e-08!24;CL:0000826!6.14e-08!24;CL:0002393!1.04e-07!9;CL:0002397!1.04e-07!9 | |ontology_enrichment_celltype=CL:0000738!8.90e-26!140;CL:0002057!4.42e-25!42;CL:0000860!4.73e-24!45;CL:0002087!1.12e-23!119;CL:0002031!7.93e-22!124;CL:0002009!1.83e-19!65;CL:0002194!2.76e-19!63;CL:0000576!2.76e-19!63;CL:0000040!2.76e-19!63;CL:0000559!2.76e-19!63;CL:0000766!2.77e-18!76;CL:0000988!6.45e-18!182;CL:0000557!1.15e-17!71;CL:0002032!1.27e-17!165;CL:0000837!1.27e-17!165;CL:0000037!1.62e-17!172;CL:0000566!1.62e-17!172;CL:0000839!5.02e-17!70;CL:0000763!1.46e-11!112;CL:0000049!1.46e-11!112;CL:0000945!6.14e-08!24;CL:0000826!6.14e-08!24;CL:0002393!1.04e-07!9;CL:0002397!1.04e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.68e-39;33!CL:0002057;4.68e-39;33!CL:0000473;2.14e-28;39!CL:0000234;2.14e-28;39!CL:0000576;8.12e-19;48!CL:0000771;4.47e-16;2!CL:0000766;7.91e-14;69!CL:0000763;1.47e-10;100!CL:0002087;1.11e-07;104!CL:0000081;9.89e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.50e-37,42;CL:0002057,5.50e-37,42;CL:0000473,1.59e-36,48;CL:0000234,1.59e-36,48;CL:0000766,1.30e-29,72;CL:0002194,1.25e-28,59;CL:0000576,1.25e-28,59;CL:0000040,1.25e-28,59;CL:0000559,1.25e-28,59;CL:0002009,1.31e-27,61;CL:0000839,2.51e-25,66;CL:0000557,6.54e-25,67;CL:0000763,1.00e-18,108;CL:0000049,1.00e-18,108;CL:0000771,4.00e-16,2;CL:0000738,5.23e-16,136;CL:0002087,3.12e-15,115;CL:0002031,1.80e-14,120;CL:0000988,5.24e-13,177;CL:0002032,5.47e-13,161;CL:0000837,5.47e-13,161;CL:0000037,2.65e-12,168;CL:0000081,9.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-25;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-18!102;UBERON:0003061!1.12e-18!102;UBERON:0002193!2.45e-16!112;UBERON:0002371!2.84e-16!80;UBERON:0001474!3.15e-14!86;UBERON:0002405!2.37e-13!115;UBERON:0004765!6.12e-11!101;UBERON:0001434!6.12e-11!101;UBERON:0001737!2.05e-08!9 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-18!102;UBERON:0003061!1.12e-18!102;UBERON:0002193!2.45e-16!112;UBERON:0002371!2.84e-16!80;UBERON:0001474!3.15e-14!86;UBERON:0002405!2.37e-13!115;UBERON:0004765!6.12e-11!101;UBERON:0001434!6.12e-11!101;UBERON:0001737!2.05e-08!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-21,76;UBERON:0002390,6.37e-21,98;UBERON:0003061,6.37e-21,98;UBERON:0001474,7.22e-20,82;UBERON:0002193,1.08e-18,108;UBERON:0004765,7.40e-18,90;UBERON:0002405,3.43e-17,93;UBERON:0001434,8.62e-16,100;UBERON:0002204,1.60e-09,167;UBERON:0003081,2.08e-08,203 | |||
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| ||
|short_description=p4@IFIH1 | |short_description=p4@IFIH1 | ||
}} | }} |
Latest revision as of 21:52, 17 September 2015
Short description: | p4@IFIH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFIH1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -49bp_to_NM_022168, uc002uce.2, uc002ucf.2_5end |
EntrezGene: | IFIH1 |
HGNC: | 18873 |
UniProt: | Q9BYX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.50e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.50e-37 | 42 |
defensive cell | 1.59e-36 | 48 |
phagocyte | 1.59e-36 | 48 |
myeloid leukocyte | 1.30e-29 | 72 |
monopoietic cell | 1.25e-28 | 59 |
monocyte | 1.25e-28 | 59 |
monoblast | 1.25e-28 | 59 |
promonocyte | 1.25e-28 | 59 |
macrophage dendritic cell progenitor | 1.31e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.51e-25 | 66 |
granulocyte monocyte progenitor cell | 6.54e-25 | 67 |
myeloid cell | 1.00e-18 | 108 |
common myeloid progenitor | 1.00e-18 | 108 |
eosinophil | 4.00e-16 | 2 |
leukocyte | 5.23e-16 | 136 |
nongranular leukocyte | 3.12e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-14 | 120 |
hematopoietic cell | 5.24e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-13 | 161 |
hematopoietic stem cell | 2.65e-12 | 168 |
blood cell | 9.70e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-21 | 76 |
hematopoietic system | 6.37e-21 | 98 |
blood island | 6.37e-21 | 98 |
bone element | 7.22e-20 | 82 |
hemolymphoid system | 1.08e-18 | 108 |
skeletal element | 7.40e-18 | 90 |
immune system | 3.43e-17 | 93 |
skeletal system | 8.62e-16 | 100 |
musculoskeletal system | 1.60e-09 | 167 |
lateral plate mesoderm | 2.08e-08 | 203 |