FFCP PHASE1:Hg19::chr5:150591511..150591521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=-189bp_to_ENST00000523466_5end | |association_with_transcript=-189bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591511..150591521,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_22_at_GM2A_5end | |description=CAGE_peak_22_at_GM2A_5end | ||
|id=chr5:150591511..150591521,+ | |id=chr5:150591511..150591521,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.46e-35!53;CL:0000051!4.46e-35!53;CL:0000838!1.62e-32!52;CL:0000084!2.87e-19!25;CL:0000827!2.87e-19!25;CL:0000738!4.96e-18!140;CL:0002087!5.04e-17!119;CL:0000037!4.77e-16!172;CL:0000566!4.77e-16!172;CL:0000988!8.49e-15!182;CL:0002032!2.92e-14!165;CL:0000837!2.92e-14!165;CL:0000945!1.95e-13!24;CL:0000826!1.95e-13!24;CL:0002031!3.14e-13!124;CL:0000791!3.69e-08!18;CL:0000789!3.69e-08!18;CL:0002420!3.69e-08!18;CL:0002419!3.69e-08!18;CL:0000790!3.69e-08!18 | |ontology_enrichment_celltype=CL:0000542!4.46e-35!53;CL:0000051!4.46e-35!53;CL:0000838!1.62e-32!52;CL:0000084!2.87e-19!25;CL:0000827!2.87e-19!25;CL:0000738!4.96e-18!140;CL:0002087!5.04e-17!119;CL:0000037!4.77e-16!172;CL:0000566!4.77e-16!172;CL:0000988!8.49e-15!182;CL:0002032!2.92e-14!165;CL:0000837!2.92e-14!165;CL:0000945!1.95e-13!24;CL:0000826!1.95e-13!24;CL:0002031!3.14e-13!124;CL:0000791!3.69e-08!18;CL:0000789!3.69e-08!18;CL:0002420!3.69e-08!18;CL:0002419!3.69e-08!18;CL:0000790!3.69e-08!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.07e-20!10;DOID:2531!9.42e-14!51;DOID:0060083!9.42e-14!51 | |ontology_enrichment_disease=DOID:0060058!2.07e-20!10;DOID:2531!9.42e-14!51;DOID:0060083!9.42e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.41e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.47e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.58e-11!4;UBERON:0005058!2.58e-11!4;UBERON:0009113!2.58e-11!4;UBERON:0003295!2.58e-11!4;UBERON:0005562!2.58e-11!4;UBERON:0004177!1.10e-10!7;UBERON:0000974!1.09e-07!10;UBERON:0003351!1.13e-07!6;UBERON:0001042!1.70e-07!10;UBERON:0009145!1.70e-07!10;UBERON:0000178!2.36e-07!15;UBERON:0000179!2.36e-07!15;UBERON:0000463!2.36e-07!15;UBERON:0006562!8.16e-07!11 | |ontology_enrichment_uberon=UBERON:0002370!2.58e-11!4;UBERON:0005058!2.58e-11!4;UBERON:0009113!2.58e-11!4;UBERON:0003295!2.58e-11!4;UBERON:0005562!2.58e-11!4;UBERON:0004177!1.10e-10!7;UBERON:0000974!1.09e-07!10;UBERON:0003351!1.13e-07!6;UBERON:0001042!1.70e-07!10;UBERON:0009145!1.70e-07!10;UBERON:0000178!2.36e-07!15;UBERON:0000179!2.36e-07!15;UBERON:0000463!2.36e-07!15;UBERON:0006562!8.16e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.43e-131;2!UBERON:0005058;6.43e-131;2!UBERON:0009113;6.43e-131;2!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.46e-07;32!UBERON:0002368;2.47e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p22@GM2A | |short_description=p22@GM2A | ||
}} | }} |
Latest revision as of 08:14, 16 September 2015
Short description: | p22@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GM2A_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -189bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.47e-09 | 8 |