FFCP PHASE1:Hg19::chr6:54711471..54711486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222584 | |EntrezGene=222584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21357 | |HGNC=21357 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0W9 | |UniProt=Q5T0W9 | ||
|association_with_transcript=-82bp_to_ENST00000306858,NM_001010872,uc003pck.2_5end | |association_with_transcript=-82bp_to_ENST00000306858,NM_001010872,uc003pck.2_5end | ||
|cluster_id=chr6:54711471..54711486,+ | |||
|coexpression_cluster_id=C4617 | |coexpression_cluster_id=C4617 | ||
|description=CAGE_peak_3_at_FAM83B_5end | |description=CAGE_peak_3_at_FAM83B_5end | ||
|id=chr6:54711471..54711486,+ | |id=chr6:54711471..54711486,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.48e-24!43;CL:0000066!3.70e-22!254;CL:0000223!2.80e-18!59;CL:0002251!2.03e-16!21;CL:0002159!1.09e-08!13;CL:0002368!1.33e-08!13;CL:0000622!4.27e-07!5 | |ontology_enrichment_celltype=CL:0002076!4.48e-24!43;CL:0000066!3.70e-22!254;CL:0000223!2.80e-18!59;CL:0002251!2.03e-16!21;CL:0002159!1.09e-08!13;CL:0002368!1.33e-08!13;CL:0000622!4.27e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.15e-24;42!CL:0002251;5.79e-21;20!CL:0000622;1.30e-13;5!CL:0002368;3.36e-12;13!CL:0002159;1.17e-11;14!CL:0000154;2.74e-11;6!CL:0002621;1.06e-09;3!CL:0002623;3.19e-09;3!CL:0002166;4.21e-09;3!CL:0002328;4.52e-09;3!CL:0000240;4.08e-08;6!CL:0000311;4.08e-08;6!CL:0000079;4.08e-08;6!CL:0000237;4.08e-08;6!CL:0000362;1.14e-07;9!CL:0000150;2.09e-07;9!CL:0001014;4.85e-07;2!CL:0001016;4.85e-07;2!CL:0002327;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.07e-31,42;CL:0000223,1.83e-25,58;CL:0002251,5.79e-21,20;CL:0000066,2.38e-18,253;CL:0000622,1.73e-13,5;CL:0002368,2.54e-12,13;CL:0002159,1.56e-11,14;CL:0000154,3.47e-11,6;CL:0002621,1.07e-09,3;CL:0002623,3.07e-09,3;CL:0002166,4.53e-09,3;CL:0002328,5.07e-09,3;CL:0000076,5.70e-09,63;CL:0000240,4.33e-08,6;CL:0000311,4.33e-08,6;CL:0000079,4.33e-08,6;CL:0000237,4.33e-08,6;CL:0000036,4.33e-08,6;CL:0000357,4.33e-08,6;CL:0000114,4.33e-08,6;CL:0000362,1.45e-07,9;CL:0000150,2.43e-07,9;CL:0001014,4.79e-07,2;CL:0001016,4.79e-07,2;CL:0002327,6.57e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;6.85e-13;58!CL:0000357;4.08e-08;6!CL:0000114;4.08e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.99e-20!106;DOID:1749!9.18e-15!14;DOID:0050687!8.09e-14!143 | |ontology_enrichment_disease=DOID:305!2.99e-20!106;DOID:1749!9.18e-15!14;DOID:0050687!8.09e-14!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.70e-23;14!DOID:5093;4.29e-07;4!DOID:1612;4.29e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-23,14;DOID:305,4.02e-08,106;DOID:5093,3.76e-07,4;DOID:1612,3.76e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.16e-23!169;UBERON:0000925!1.16e-23!169;UBERON:0006595!1.16e-23!169;UBERON:0001007!3.67e-20!155;UBERON:0001555!3.67e-20!155;UBERON:0007026!3.67e-20!155;UBERON:0001004!5.03e-18!72;UBERON:0004921!2.00e-15!129;UBERON:0004185!2.00e-15!129;UBERON:0000065!9.17e-15!53;UBERON:0000077!4.70e-13!130;UBERON:0000072!7.81e-13!46;UBERON:0000161!1.05e-10!35;UBERON:0001557!3.71e-10!19;UBERON:0001041!4.93e-09!98;UBERON:0000344!5.76e-09!12;UBERON:0008947!1.59e-08!38;UBERON:0003258!1.59e-08!38;UBERON:0000166!2.35e-08!21;UBERON:0003729!2.29e-07!5;UBERON:0000062!2.58e-07!511;UBERON:0005911!2.65e-07!82;UBERON:0004807!5.82e-07!28;UBERON:0001737!9.28e-07!9 | |ontology_enrichment_uberon=UBERON:0004119!1.16e-23!169;UBERON:0000925!1.16e-23!169;UBERON:0006595!1.16e-23!169;UBERON:0001007!3.67e-20!155;UBERON:0001555!3.67e-20!155;UBERON:0007026!3.67e-20!155;UBERON:0001004!5.03e-18!72;UBERON:0004921!2.00e-15!129;UBERON:0004185!2.00e-15!129;UBERON:0000065!9.17e-15!53;UBERON:0000077!4.70e-13!130;UBERON:0000072!7.81e-13!46;UBERON:0000161!1.05e-10!35;UBERON:0001557!3.71e-10!19;UBERON:0001041!4.93e-09!98;UBERON:0000344!5.76e-09!12;UBERON:0008947!1.59e-08!38;UBERON:0003258!1.59e-08!38;UBERON:0000166!2.35e-08!21;UBERON:0003729!2.29e-07!5;UBERON:0000062!2.58e-07!511;UBERON:0005911!2.65e-07!82;UBERON:0004807!5.82e-07!28;UBERON:0001737!9.28e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.11e-13;19!UBERON:0000166;3.11e-13;19!UBERON:0003729;5.22e-13;13!UBERON:0000165;3.80e-12;28!UBERON:0003343;1.18e-11;4!UBERON:0004785;1.18e-11;4!UBERON:0000344;6.49e-10;20!UBERON:0001949;1.06e-09;3!UBERON:0004815;4.52e-09;3!UBERON:0002031;4.52e-09;3!UBERON:0000974;9.18e-08;6!UBERON:0010371;2.69e-07;31!UBERON:0001708;6.49e-07;4!UBERON:0008895;6.49e-07;4!UBERON:0001911;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.48e-13,22;UBERON:0003102,2.33e-13,99;UBERON:0003729,5.51e-13,13;UBERON:0001004,1.83e-12,74;UBERON:0000161,3.80e-12,36;UBERON:0000165,1.30e-11,29;UBERON:0000930,1.30e-11,29;UBERON:0003343,1.35e-11,4;UBERON:0004785,1.35e-11,4;UBERON:0000344,6.33e-10,20;UBERON:0001949,1.07e-09,3;UBERON:0004815,5.07e-09,3;UBERON:0002031,5.07e-09,3;UBERON:0000033,5.56e-09,56;UBERON:0004119,2.34e-08,160;UBERON:0000925,2.34e-08,160;UBERON:0006595,2.34e-08,160;UBERON:0000153,9.38e-08,62;UBERON:0007811,9.38e-08,62;UBERON:0010188,1.99e-07,6;UBERON:0002539,1.99e-07,6;UBERON:0008816,1.99e-07,6;UBERON:0001911,6.57e-07,4;UBERON:0005333,6.57e-07,4;UBERON:0008425,6.57e-07,4;UBERON:0005311,6.57e-07,4;UBERON:0001708,6.85e-07,4;UBERON:0008895,6.85e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,1.204823675113,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,2.45471508531751,5.73609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0.505754070234305,0.964044119533928,0.55146986366197,0,0.949082476444386,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.860919069801795,0,6.03626569747441,2.24803506515239,4.82539067575828,2.4998880192803,0,0,0,0,0,0,0,0,4.74122638775565,4.29243081047436,0,0,0,3.74935335947108,1.17587489739202,3.54437743105966,3.58234090811393,2.90633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.40607764363942,2.3941057123333,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,1.81813406897076,1.72971060628596,3.06270509987002,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,1.34060455107157,0,0.659006605437454,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,2.62618933211459,1.48482340416319,1.53580351049616,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.359473404589307,1.43216939740487,0,0.295930216910801,0,0,0,0,0,1.5625665665114,0.349839999984783,0.724999575434793,0.910347586283997,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,5.71637351542273,1.00035336054936,0,0.46112780877612,0.538545866458633,0.54323685961004,0.638002319463839,1.64875668123352,1.5991043280559,0,0,0,0,0,0,0,0,0,0.326465616318295,0.424059214301822,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,5.47860933009851,0,0.394584402849391,1.20990716048664,0,0,2.40517471063188,0.311064574191741,0,0,0,0,1.13843818411917,0.138674673013139,0,4.60564267847575,3.5694274697965,0,0,0.19351266257817,0.365446585430928,0.0821154570532092,3.006659511141,0,0,0,0,0,0.977756913674015,0.320635281006135,0.213452994739353,0.39961921916426,1.72908500584927,0,0,0,0.745515213392595,3.53541051925193,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,1.59743200399193,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,2.4747128070665,38.6900977278975,0,1.0063040627978,0.86686278029118,0.157363764404994,0.211200673038813,0.179287339332845,4.41404953834724,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5118964753353,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,3.91662621614445,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,2.74813611802872,2.35939446695481,6.05314375121541,1.27078232765372,0,0,0,0.0752103283492573,0,0,1.83334686136996,0,0,0,0,0,0,0,0,0.992422356778588,0,1.14986184875636,0,0,0,0,1.1531308121143,0,0,0,0,0.118193840883968,0,0.627944742804112,0,0.840816489941367,0,0,0,0,0,0,0,0,3.10824246244555,1.3657478167516,4.83881763269864,0,0.236664001461131,0.596493833314104,0,0,0,0,1.34226518157351,0.392600934460972,0.243835849964539,1.94228651156368,0.513314034281235,0,5.82853191670967,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,6.24938785119802,4.2347384605883,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0,0,0.476128862927481,0.322944549180031,0.806971285846153,0.897054900644907,0.827413057616144,0.404234377916439,3.48346796635138,0.684466602170562,0.336760265072938,1.07583308089015,0.665320713092027,1.54666210360852,0,0,0.449126010532934,7.03922827210363,0,0.406896178315738,0.665756774185513,0.201273793591026,0 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| ||
|short_description=p3@FAM83B | |short_description=p3@FAM83B | ||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p3@FAM83B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM83B_5end |
Coexpression cluster: | C4617_immature_malignant_squamous_oral_amniotic_Keratinocyte_epidermoid |
Association with transcript: | -82bp_to_ENST00000306858, NM_001010872, uc003pck.2_5end |
EntrezGene: | FAM83B |
HGNC: | 21357 |
UniProt: | Q5T0W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.07e-31 | 42 |
endodermal cell | 1.83e-25 | 58 |
epithelial cell of alimentary canal | 5.79e-21 | 20 |
epithelial cell | 2.38e-18 | 253 |
acinar cell | 1.73e-13 | 5 |
respiratory epithelial cell | 2.54e-12 | 13 |
general ecto-epithelial cell | 1.56e-11 | 14 |
protein secreting cell | 3.47e-11 | 6 |
gingival epithelial cell | 1.07e-09 | 3 |
acinar cell of salivary gland | 3.07e-09 | 3 |
epithelial cell of Malassez | 4.53e-09 | 3 |
bronchial epithelial cell | 5.07e-09 | 3 |
squamous epithelial cell | 5.70e-09 | 63 |
stratified squamous epithelial cell | 4.33e-08 | 6 |
keratin accumulating cell | 4.33e-08 | 6 |
stratified epithelial cell | 4.33e-08 | 6 |
keratinizing barrier epithelial cell | 4.33e-08 | 6 |
epithelial fate stem cell | 4.33e-08 | 6 |
stratified epithelial stem cell | 4.33e-08 | 6 |
surface ectodermal cell | 4.33e-08 | 6 |
epidermal cell | 1.45e-07 | 9 |
glandular epithelial cell | 2.43e-07 | 9 |
CD1a-positive Langerhans cell | 4.79e-07 | 2 |
immature CD1a-positive Langerhans cell | 4.79e-07 | 2 |
mammary gland epithelial cell | 6.57e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.48e-13 | 22 |
surface structure | 2.33e-13 | 99 |
mouth mucosa | 5.51e-13 | 13 |
respiratory system | 1.83e-12 | 74 |
orifice | 3.80e-12 | 36 |
mouth | 1.30e-11 | 29 |
stomodeum | 1.30e-11 | 29 |
mucosa of oral region | 1.35e-11 | 4 |
respiratory system mucosa | 1.35e-11 | 4 |
mucosa | 6.33e-10 | 20 |
gingival epithelium | 1.07e-09 | 3 |
lower respiratory tract epithelium | 5.07e-09 | 3 |
epithelium of bronchus | 5.07e-09 | 3 |
head | 5.56e-09 | 56 |
endoderm-derived structure | 2.34e-08 | 160 |
endoderm | 2.34e-08 | 160 |
presumptive endoderm | 2.34e-08 | 160 |
anterior region of body | 9.38e-08 | 62 |
craniocervical region | 9.38e-08 | 62 |
protuberance | 1.99e-07 | 6 |
pharyngeal arch | 1.99e-07 | 6 |
embryonic head | 1.99e-07 | 6 |
mammary gland | 6.57e-07 | 4 |
mammary bud | 6.57e-07 | 4 |
mammary ridge | 6.57e-07 | 4 |
mammary placode | 6.57e-07 | 4 |
jaw skeleton | 6.85e-07 | 4 |
splanchnocranium | 6.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-23 | 14 |
carcinoma | 4.02e-08 | 106 |
thoracic cancer | 3.76e-07 | 4 |
breast cancer | 3.76e-07 | 4 |