FFCP PHASE1:Hg19::chr19:55661012..55661035,-: Difference between revisions
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|id=chr19:55661012..55661035,-
|short_description=p7@TNNT1
|description=CAGE_peak_7_at_TNNT1_5end
|association_with_transcript=-406bp_to_ENST00000291901,ENST0000035...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7138 | |EntrezGene=7138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |HGNC=11948 | ||
|TSSclassifier=strong | |||
|UniProt=P13805,F5H1H4,Q05DL6 | |UniProt=P13805,F5H1H4,Q05DL6 | ||
|association_with_transcript=-406bp_to_ENST00000291901,ENST00000356783,ENST00000429737,ENST00000536926,NM_001126132,NM_001126133,NM_003283,uc002qjb.3,uc002qjc.3,uc002qjd.3,uc002qje.3,uc002qjf.2_5end | |||
|cluster_id=chr19:55661012..55661035,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_7_at_TNNT1_5end | |||
|id=chr19:55661012..55661035,- | |||
|ontology_enrichment_celltype=CL:0000188!6.21e-10!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.45e-11;1!UBERON:0006298;3.81e-11;1 | |||
|ontology_enrichment_disease=DOID:114!3.25e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;3.81e-11;1!DOID:4549;3.81e-11;1!DOID:5861;3.81e-11;1!DOID:6496;3.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.96e-11,1;DOID:4549,2.96e-11,1;DOID:5861,2.96e-11,1;DOID:6496,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001630!3.37e-09!2;UBERON:0005090!3.37e-09!2;UBERON:0000341!7.58e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.91e-22;16!UBERON:0002036;2.91e-22;16!UBERON:0005090;1.01e-21;2!UBERON:0001630;1.01e-21;2!UBERON:0001723;1.15e-14;3!UBERON:0001033;1.15e-14;3!UBERON:0001389;8.62e-12;1!UBERON:0000026;8.62e-12;1!UBERON:0008784;8.62e-12;1!UBERON:0006058;8.62e-12;1!UBERON:0003663;8.62e-12;1!UBERON:0004256;8.62e-12;1!UBERON:0004708;8.62e-12;1!UBERON:0002101;8.62e-12;1!UBERON:0004709;8.62e-12;1!UBERON:0002529;8.62e-12;1!UBERON:0010538;8.62e-12;1!UBERON:0003661;8.62e-12;1!UBERON:0010890;8.62e-12;1!UBERON:0002471;8.62e-12;1!UBERON:0001383;8.62e-12;1!UBERON:0010758;8.62e-12;1!UBERON:0010707;8.62e-12;1!UBERON:0000978;8.62e-12;1!UBERON:0002103;8.62e-12;1!UBERON:0001665;8.62e-12;1!UBERON:0003823;8.62e-12;1!UBERON:0000154;8.62e-12;1!UBERON:0010709;8.62e-12;1!UBERON:0002426;1.06e-11;1!UBERON:0003831;1.06e-11;1!UBERON:0003898;1.06e-11;1!UBERON:0004830;1.06e-11;1!UBERON:0003830;1.06e-11;1!UBERON:0005175;1.06e-11;1!UBERON:0001774;1.06e-11;1!UBERON:0001103;1.06e-11;1!UBERON:0000989;1.45e-11;1!UBERON:0008811;1.45e-11;1!UBERON:0002385;2.31e-11;31!UBERON:0001015;2.31e-11;31!UBERON:0000383;2.31e-11;31!UBERON:0007029;3.81e-11;1!UBERON:0001736;3.81e-11;1!UBERON:0001301;3.81e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.01e-21,2;UBERON:0001630,1.01e-21,2;UBERON:0001723,1.15e-14,3;UBERON:0001033,1.15e-14,3;UBERON:0010056,1.15e-14,3;UBERON:0005418,8.62e-12,1;UBERON:0001389,8.62e-12,1;UBERON:0000026,8.62e-12,1;UBERON:0008784,8.62e-12,1;UBERON:0006058,8.62e-12,1;UBERON:0003663,8.62e-12,1;UBERON:0004256,8.62e-12,1;UBERON:0004708,8.62e-12,1;UBERON:0002101,8.62e-12,1;UBERON:0004709,8.62e-12,1;UBERON:0002529,8.62e-12,1;UBERON:0010538,8.62e-12,1;UBERON:0003661,8.62e-12,1;UBERON:0010890,8.62e-12,1;UBERON:0002471,8.62e-12,1;UBERON:0001383,8.62e-12,1;UBERON:0004357,8.62e-12,1;UBERON:0004347,8.62e-12,1;UBERON:0005420,8.62e-12,1;UBERON:0005732,8.62e-12,1;UBERON:0010758,8.62e-12,1;UBERON:0010707,8.62e-12,1;UBERON:0000978,8.62e-12,1;UBERON:0002103,8.62e-12,1;UBERON:0001665,8.62e-12,1;UBERON:0003823,8.62e-12,1;UBERON:0000154,8.62e-12,1;UBERON:0010709,8.62e-12,1;UBERON:0005733,8.62e-12,1;UBERON:0005730,8.62e-12,1;UBERON:0002426,1.06e-11,1;UBERON:0003831,1.06e-11,1;UBERON:0003898,1.06e-11,1;UBERON:0004830,1.06e-11,1;UBERON:0003830,1.06e-11,1;UBERON:0005175,1.06e-11,1;UBERON:0001774,1.06e-11,1;UBERON:0001103,1.06e-11,1;UBERON:0010084,1.06e-11,1;UBERON:0000989,1.45e-11,1;UBERON:0008811,1.45e-11,1;UBERON:0006258,1.45e-11,1;UBERON:0005876,1.45e-11,1;UBERON:0004874,1.45e-11,1;UBERON:0007029,2.42e-11,1;UBERON:0001736,3.63e-11,1;UBERON:0006298,3.63e-11,1;UBERON:0001301,4.44e-11,1 | |||
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| ||
|short_description=p7@TNNT1 | |||
}} | }} |
Latest revision as of 00:06, 20 September 2015
Short description: | p7@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNNT1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -406bp_to_ENST00000291901, ENST00000356783, ENST00000429737, ENST00000536926, NM_001126132, NM_001126133, NM_003283, uc002qjb.3, uc002qjc.3, uc002qjd.3, uc002qje.3, uc002qjf.2_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | P13805F5H1H4Q05DL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.96e-11 | 1 |
extraosseous chondrosarcoma | 2.96e-11 | 1 |
myxoid chondrosarcoma | 2.96e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 2.96e-11 | 1 |