FFCP PHASE1:Hg19::chr11:77282391..77282402,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:77282391..77282402,+ | |||
|coexpression_cluster_id=C337 | |coexpression_cluster_id=C337 | ||
|description=CAGE_peak_at_chr11:77282391..77282402,+ | |description=CAGE_peak_at_chr11:77282391..77282402,+ | ||
|id=chr11:77282391..77282402,+ | |id=chr11:77282391..77282402,+ | ||
|ontology_enrichment_celltype=CL:0000511;9.91e-41;1!CL:0002625;9.91e-41;1!CL:0000216;9.91e-41;1!CL:0002174;1.48e-40;1!CL:0000501;1.48e-40;1!CL:0000174;1.60e-14;3!CL:0000154;5.92e-08;6 | |ontology_enrichment_celltype=CL:0000511!7.89e-13!1;CL:0002625!7.89e-13!1;CL:0000216!7.89e-13!1;CL:0002174!8.85e-13!1;CL:0000501!8.85e-13!1;CL:0002557!4.81e-12!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000511;9.91e-41;1!CL:0002625;9.91e-41;1!CL:0000216;9.91e-41;1!CL:0002174;1.48e-40;1!CL:0000501;1.48e-40;1!CL:0000174;1.60e-14;3!CL:0000154;5.92e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.91e-41,1;CL:0002625,9.91e-41,1;CL:0000216,9.91e-41,1;CL:0002174,1.48e-40,1;CL:0000501,1.48e-40,1;CL:0000174,1.60e-14,3;CL:0000154,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.21e-17;10!UBERON:0005564;7.21e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001136;9.91e-41;1!UBERON:0001343;9.91e-41;1!UBERON:0004910;9.91e-41;1!UBERON:0004813;9.91e-41;1!UBERON:0000991;1.13e-30;21!UBERON:0004909;3.81e-21;2!UBERON:0000473;9.44e-21;8!UBERON:0003135;2.09e-15;11!UBERON:0000992;3.12e-13;13!UBERON:0005904;2.80e-11;4!UBERON:0003133;9.13e-11;44!UBERON:0002553;2.82e-10;52!UBERON:0002118;3.35e-09;5!UBERON:0002323;9.81e-09;45!UBERON:0003101;3.21e-08;22!UBERON:0000079;3.21e-08;22!UBERON:0004458;8.30e-08;48 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!5.80e-19!21;UBERON:0009196!5.80e-19!21;UBERON:0009117!5.80e-19!21;UBERON:0005564!5.80e-19!21;UBERON:0004176!4.36e-18!22;UBERON:0000473!2.39e-13!8;UBERON:0001136!7.89e-13!1;UBERON:0001343!7.89e-13!1;UBERON:0004910!7.89e-13!1;UBERON:0005154!7.89e-13!1;UBERON:0005295!7.89e-13!1;UBERON:0004813!7.89e-13!1;UBERON:0005297!7.89e-13!1;UBERON:0005294!7.89e-13!1;UBERON:0010141!7.89e-13!1;UBERON:0005891!7.89e-13!1;UBERON:0001882!1.96e-12!1;UBERON:0005403!1.96e-12!1;UBERON:0003135!7.40e-10!11;UBERON:0002323!1.88e-08!46;UBERON:0000992!2.30e-08!13;UBERON:0003133!4.40e-08!48;UBERON:0004458!6.56e-08!49;UBERON:0004909!4.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.91e-41;1!UBERON:0001343;9.91e-41;1!UBERON:0004910;9.91e-41;1!UBERON:0004813;9.91e-41;1!UBERON:0000991;1.13e-30;21!UBERON:0004909;3.81e-21;2!UBERON:0000473;9.44e-21;8!UBERON:0003135;2.09e-15;11!UBERON:0000992;3.12e-13;13!UBERON:0005904;2.80e-11;4!UBERON:0003133;9.13e-11;44!UBERON:0002553;2.82e-10;52!UBERON:0002118;3.35e-09;5!UBERON:0002323;9.81e-09;45!UBERON:0003101;3.21e-08;22!UBERON:0000079;3.21e-08;22!UBERON:0004458;8.30e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.91e-41,1;UBERON:0001343,9.91e-41,1;UBERON:0004910,9.91e-41,1;UBERON:0005154,9.91e-41,1;UBERON:0005295,9.91e-41,1;UBERON:0004813,9.91e-41,1;UBERON:0005297,9.91e-41,1;UBERON:0005294,9.91e-41,1;UBERON:0010141,9.91e-41,1;UBERON:0005891,9.91e-41,1;UBERON:0000991,1.13e-30,21;UBERON:0009196,1.13e-30,21;UBERON:0009117,1.13e-30,21;UBERON:0005564,1.13e-30,21;UBERON:0004176,2.54e-29,22;UBERON:0004909,3.81e-21,2;UBERON:0000473,9.92e-21,8;UBERON:0003135,2.17e-15,11;UBERON:0002323,1.89e-14,46;UBERON:0003133,7.05e-14,48;UBERON:0004458,1.31e-13,49;UBERON:0000992,3.03e-13,13;UBERON:0003886,2.04e-12,54;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0005904,2.80e-11,4;UBERON:0002553,4.53e-11,61;UBERON:0002118,3.22e-09,5;UBERON:0003101,3.27e-08,22;UBERON:0000079,3.27e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84413987978241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84413987978241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:77282391..77282402,+ | |short_description=p@chr11:77282391..77282402,+ | ||
}} | }} |
Latest revision as of 02:44, 24 July 2015
Short description: | p@chr11:77282391..77282402, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:77282391..77282402, + |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.91e-41 | 1 |
seminiferous tubule epithelial cell | 9.91e-41 | 1 |
Sertoli cell | 9.91e-41 | 1 |
follicular cell of ovary | 1.48e-40 | 1 |
granulosa cell | 1.48e-40 | 1 |
steroid hormone secreting cell | 1.60e-14 | 3 |
protein secreting cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.91e-41 | 1 |
seminiferous tubule of testis | 9.91e-41 | 1 |
epithelium of male gonad | 9.91e-41 | 1 |
epithelial cord | 9.91e-41 | 1 |
sex cord | 9.91e-41 | 1 |
seminiferous tubule epithelium | 9.91e-41 | 1 |
testis sex cord | 9.91e-41 | 1 |
genital ridge | 9.91e-41 | 1 |
primitive sex cord of indifferent gonad | 9.91e-41 | 1 |
coelomic epithelium | 9.91e-41 | 1 |
gonad | 1.13e-30 | 21 |
indifferent external genitalia | 1.13e-30 | 21 |
indifferent gonad | 1.13e-30 | 21 |
gonad primordium | 1.13e-30 | 21 |
external genitalia | 2.54e-29 | 22 |
epithelium of gonad | 3.81e-21 | 2 |
testis | 9.92e-21 | 8 |
male reproductive organ | 2.17e-15 | 11 |
body cavity | 1.89e-14 | 46 |
reproductive organ | 7.05e-14 | 48 |
body cavity or lining | 1.31e-13 | 49 |
female gonad | 3.03e-13 | 13 |
body cavity precursor | 2.04e-12 | 54 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
duct of male reproductive system | 2.80e-11 | 4 |
anatomical cavity | 4.53e-11 | 61 |
right ovary | 3.22e-09 | 5 |
male organism | 3.27e-08 | 22 |
male reproductive system | 3.27e-08 | 22 |