FFCP PHASE1:Hg19::chr19:42806919..42806958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5050 | |EntrezGene=5050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8576 | |HGNC=8576 | ||
|TSSclassifier=strong | |||
|UniProt=Q15102 | |UniProt=Q15102 | ||
|association_with_transcript=0bp_to_ENST00000538771,NM_001145939,NM_001145940,uc010xwi.1,uc010xwj.1_5end | |association_with_transcript=0bp_to_ENST00000538771,NM_001145939,NM_001145940,uc010xwi.1,uc010xwj.1_5end | ||
|cluster_id=chr19:42806919..42806958,- | |||
|description=CAGE_peak_3_at_PAFAH1B3_5end | |description=CAGE_peak_3_at_PAFAH1B3_5end | ||
|id=chr19:42806919..42806958,- | |id=chr19:42806919..42806958,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000988!1.27e-09!182;CL:0000037!3.33e-08!172;CL:0000566!3.33e-08!172;CL:0002057!1.11e-07!42;CL:0002032!2.60e-07!165;CL:0000837!2.60e-07!165;CL:0000034!3.55e-07!444;CL:0000860!5.73e-07!45 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:8692;2.48e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000988,2.52e-10,177;CL:0000037,4.55e-09,168;CL:0002032,3.99e-08,161;CL:0000837,3.99e-08,161;CL:0000860,1.21e-07,42;CL:0002057,1.21e-07,42;CL:0000763,1.60e-07,108;CL:0000049,1.60e-07,108;CL:0000034,2.22e-07,441;CL:0000473,5.30e-07,48;CL:0000234,5.30e-07,48 | ||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!3.93e-08!39;DOID:2531!6.21e-08!51;DOID:0060083!6.21e-08!51;DOID:8692!1.72e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.48e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.49e-08,39;DOID:2531,4.48e-08,51;DOID:0060083,4.48e-08,51;DOID:8692,1.55e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@PAFAH1B3 | |short_description=p3@PAFAH1B3 | ||
}} | }} |
Latest revision as of 09:00, 18 September 2015
Short description: | p3@PAFAH1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAFAH1B3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538771, NM_001145939, NM_001145940, uc010xwi.1, uc010xwj.1_5end |
EntrezGene: | PAFAH1B3 |
HGNC: | 8576 |
UniProt: | Q15102 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.52e-10 | 177 |
hematopoietic stem cell | 4.55e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.99e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.99e-08 | 161 |
classical monocyte | 1.21e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-07 | 42 |
myeloid cell | 1.60e-07 | 108 |
common myeloid progenitor | 1.60e-07 | 108 |
stem cell | 2.22e-07 | 441 |
defensive cell | 5.30e-07 | 48 |
phagocyte | 5.30e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.49e-08 | 39 |
hematologic cancer | 4.48e-08 | 51 |
immune system cancer | 4.48e-08 | 51 |
myeloid leukemia | 1.55e-07 | 31 |