FFCP PHASE1:Hg19::chr1:112298182..112298205,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:112298182..112298205,+
|short_description=p3@DDX20
|description=CAGE_peak_3_at_DDX20_5end
|association_with_transcript=0bp_to_NM_007204,uc001ebs.2,uc010owf...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11218 | |EntrezGene=11218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2743 | |HGNC=2743 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4N4,Q9UHI6 | |UniProt=Q9H4N4,Q9UHI6 | ||
|association_with_transcript=0bp_to_NM_007204,uc001ebs.2,uc010owf.1_5end | |||
|cluster_id=chr1:112298182..112298205,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_DDX20_5end | |||
|id=chr1:112298182..112298205,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.49e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0,0.485168122375632,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0,0.212604299965044,0,0,0.450530678524519,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,16.1104262862187,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,1.99613798001194,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.337017719270924,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0.18378979906969,0,39.0260295823933,55.4685749423289,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0,0.485168122375632,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0,0.212604299965044,0,0,0.450530678524519,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,16.1104262862187,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,1.99613798001194,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.337017719270924,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0.18378979906969,0,39.0260295823933,55.4685749423289,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@DDX20 | |||
}} | }} |
Latest revision as of 04:01, 16 September 2015
Short description: | p3@DDX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX20_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_007204, uc001ebs.2, uc010owf.1_5end |
EntrezGene: | DDX20 |
HGNC: | 2743 |
UniProt: | Q9H4N4Q9UHI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |