FFCP PHASE1:Hg19::chr1:201330489..201330500,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009wzn.2,uc009wzo.2_5end | |association_with_transcript=0bp_to_uc009wzn.2,uc009wzo.2_5end | ||
|cluster_id=chr1:201330489..201330500,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_19_at_TNNT2_5end | |description=CAGE_peak_19_at_TNNT2_5end | ||
|id=chr1:201330489..201330500,- | |id=chr1:201330489..201330500,- | ||
|ontology_enrichment_celltype=CL:0002575;3.62e-12;2 | |ontology_enrichment_celltype=CL:0000188!5.84e-12!9;CL:0000515!1.39e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002575;3.62e-12;2 | ||
|ontology_enrichment_disease=DOID:114;7.00e-45;2!DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:1287;4.86e-23;4 | |ontology_enrichment_celltype_v019_2=CL:0002575,3.62e-12,2 | ||
|ontology_enrichment_uberon=UBERON:0007100;6.82e-56;25!UBERON:0004151;2.30e-30;3!UBERON:0003978;3.59e-30;3!UBERON:0000946;3.59e-30;3!UBERON:0000948;3.93e-25;22!UBERON:0002084;2.10e-23;1!UBERON:0002079;2.10e-23;1!UBERON:0002135;2.10e-23;1!UBERON:0002082;2.10e-23;1!UBERON:0002146;4.10e-23;1!UBERON:0005623;4.10e-23;1!UBERON:0002081;2.07e-12;2!UBERON:0002133;2.07e-12;2!UBERON:0003103;3.89e-11;61!UBERON:0010313;8.84e-10;10 | |ontology_enrichment_development_v019=UBERON:0010227;2.10e-23;1!UBERON:0010226;2.10e-23;1!UBERON:0004140;4.10e-23;1!UBERON:0005062;6.42e-23;4!UBERON:0007284;6.42e-23;4 | ||
|ontology_enrichment_disease=DOID:114!3.97e-15!2;DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1287!5.41e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.00e-45;2!DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:1287;4.86e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.26e-45,2;DOID:178,4.10e-23,1;DOID:326,4.10e-23,1;DOID:3978,4.10e-23,1;DOID:3394,4.10e-23,1;DOID:5844,4.10e-23,1;DOID:1287,4.60e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.29e-21!3;UBERON:0003978!1.70e-21!3;UBERON:0009751!1.70e-21!3;UBERON:0000946!1.70e-21!3;UBERON:0002523!1.70e-21!3;UBERON:0005983!1.70e-21!3;UBERON:0002165!1.70e-21!3;UBERON:0002062!1.70e-21!3;UBERON:0007280!1.70e-21!3;UBERON:0007100!1.46e-19!27;UBERON:0002081!6.45e-15!2;UBERON:0002133!6.91e-15!2;UBERON:0003103!3.33e-14!69;UBERON:0000948!5.78e-10!24;UBERON:0005498!5.78e-10!24;UBERON:0004140!5.78e-10!24;UBERON:0009881!5.78e-10!24;UBERON:0004141!5.78e-10!24;UBERON:0003084!5.78e-10!24;UBERON:0007005!5.78e-10!24;UBERON:0004139!5.78e-10!24;UBERON:0004291!5.78e-10!24;UBERON:0002084!1.91e-08!1;UBERON:0002082!1.91e-08!1;UBERON:0004706!1.91e-08!1;UBERON:0002079!2.04e-08!1;UBERON:0002135!2.19e-08!1;UBERON:0002146!2.35e-08!1;UBERON:0005623!2.35e-08!1;UBERON:0002134!3.34e-08!1;UBERON:0005208!3.34e-08!1;UBERON:0005946!3.34e-08!1;UBERON:0005965!3.34e-08!1;UBERON:0002078!3.34e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.82e-56;25!UBERON:0004151;2.30e-30;3!UBERON:0003978;3.59e-30;3!UBERON:0000946;3.59e-30;3!UBERON:0000948;3.93e-25;22!UBERON:0002084;2.10e-23;1!UBERON:0002079;2.10e-23;1!UBERON:0002135;2.10e-23;1!UBERON:0002082;2.10e-23;1!UBERON:0002146;4.10e-23;1!UBERON:0005623;4.10e-23;1!UBERON:0002081;2.07e-12;2!UBERON:0002133;2.07e-12;2!UBERON:0003103;3.89e-11;61!UBERON:0010313;8.84e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.19e-52,27;UBERON:0004151,1.98e-30,3;UBERON:0003978,3.59e-30,3;UBERON:0009751,3.59e-30,3;UBERON:0000946,3.59e-30,3;UBERON:0002523,3.59e-30,3;UBERON:0005983,3.59e-30,3;UBERON:0002165,3.59e-30,3;UBERON:0002062,3.59e-30,3;UBERON:0007280,3.59e-30,3;UBERON:0002084,1.67e-23,1;UBERON:0002082,1.67e-23,1;UBERON:0010226,1.67e-23,1;UBERON:0002079,2.10e-23,1;UBERON:0002135,2.62e-23,1;UBERON:0002146,3.28e-23,1;UBERON:0005623,3.28e-23,1;UBERON:0000948,4.58e-23,24;UBERON:0005498,4.58e-23,24;UBERON:0004140,4.58e-23,24;UBERON:0009881,4.58e-23,24;UBERON:0004141,4.58e-23,24;UBERON:0003084,4.58e-23,24;UBERON:0007005,4.58e-23,24;UBERON:0004139,4.58e-23,24;UBERON:0004291,4.58e-23,24;UBERON:0003103,1.47e-20,68;UBERON:0004797,1.49e-13,7;UBERON:0001009,2.01e-12,112;UBERON:0002081,2.07e-12,2;UBERON:0010227,2.07e-12,2;UBERON:0002133,2.32e-12,2;UBERON:0010313,8.84e-10,10;UBERON:0002342,8.84e-10,10;UBERON:0005062,8.84e-10,10;UBERON:0007023,2.19e-09,114;UBERON:0004872,8.61e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.340906509664404,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,2.7499250881402,0.717873024576814,2.1964690054889,8.15529491459485,8.03417246790741,2.01550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,4.2881719582402,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.340906509664404,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,2.7499250881402,0.717873024576814,2.1964690054889,8.15529491459485,8.03417246790741,2.01550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,4.2881719582402,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p19@TNNT2 | |short_description=p19@TNNT2 | ||
}} | }} |
Latest revision as of 17:22, 19 September 2015
Short description: | p19@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_uc009wzn.2, uc009wzo.2_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.26e-45 | 2 |
vascular disease | 4.10e-23 | 1 |
ischemia | 4.10e-23 | 1 |
extrinsic cardiomyopathy | 4.10e-23 | 1 |
myocardial ischemia | 4.10e-23 | 1 |
myocardial infarction | 4.10e-23 | 1 |
cardiovascular system disease | 4.60e-23 | 4 |