FFCP PHASE1:Hg19::chr22:51142547..51142550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:51142547..51142550,- | |||
|coexpression_cluster_id=C600 | |coexpression_cluster_id=C600 | ||
|description=CAGE_peak_at_chr22:51142547..51142550,- | |description=CAGE_peak_at_chr22:51142547..51142550,- | ||
|id=chr22:51142547..51142550,- | |id=chr22:51142547..51142550,- | ||
|ontology_enrichment_celltype=CL:0000764;1.78e-26;2!CL:0000558;1.78e-26;2 | |ontology_enrichment_celltype=CL:0000540!3.23e-09!6;CL:0000031!3.23e-09!6;CL:0000404!3.23e-09!6;CL:0000764!1.27e-08!2;CL:0000765!1.27e-08!2;CL:0000050!1.27e-08!2;CL:0000038!1.27e-08!2;CL:0000558!1.27e-08!2;CL:0000547!1.27e-08!2;CL:0000549!1.27e-08!2;CL:0000550!1.27e-08!2;CL:0000552!1.27e-08!2;CL:0001014!6.64e-08!2;CL:0001016!6.64e-08!2;CL:0000047!6.49e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;1.78e-26;2!CL:0000558;1.78e-26;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.47e-26,2;CL:0000765,1.47e-26,2;CL:0000050,1.47e-26,2;CL:0000038,1.47e-26,2;CL:0000558,1.47e-26,2;CL:0000547,1.47e-26,2;CL:0000549,1.47e-26,2;CL:0000550,1.47e-26,2;CL:0000552,1.47e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.48e-26;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;7.51e-87;9!UBERON:0001557;7.51e-87;9!UBERON:0000072;3.54e-19;37!UBERON:0000065;8.33e-16;44!UBERON:0001004;3.76e-08;65 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.49e-32!9;UBERON:0001557!4.56e-14!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.51e-87;9!UBERON:0001557;7.51e-87;9!UBERON:0000072;3.54e-19;37!UBERON:0000065;8.33e-16;44!UBERON:0001004;3.76e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.08e-87,9;UBERON:0001557,5.43e-41,19;UBERON:0008947,3.65e-20,38;UBERON:0003258,3.65e-20,38;UBERON:0000072,3.68e-16,47;UBERON:0000065,5.77e-14,54;UBERON:0001004,5.68e-10,74;UBERON:0001041,2.35e-08,87 | |||
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| ||
|short_description=p@chr22:51142547..51142550,- | |short_description=p@chr22:51142547..51142550,- | ||
}} | }} |
Latest revision as of 22:36, 28 July 2015
Short description: | p@chr22:51142547..51142550, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:51142547..51142550, - |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.47e-26 | 2 |
erythroblast | 1.47e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 1.47e-26 | 2 |
erythroid progenitor cell | 1.47e-26 | 2 |
reticulocyte | 1.47e-26 | 2 |
proerythroblast | 1.47e-26 | 2 |
basophilic erythroblast | 1.47e-26 | 2 |
polychromatophilic erythroblast | 1.47e-26 | 2 |
orthochromatic erythroblast | 1.47e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.08e-87 | 9 |
upper respiratory tract | 5.43e-41 | 19 |
respiratory primordium | 3.65e-20 | 38 |
endoderm of foregut | 3.65e-20 | 38 |
segment of respiratory tract | 3.68e-16 | 47 |
respiratory tract | 5.77e-14 | 54 |
respiratory system | 5.68e-10 | 74 |
foregut | 2.35e-08 | 87 |