FFCP PHASE1:Hg19::chr11:67437863..67437876,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:67437863..67437876,- | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_at_chr11:67437863..67437876,- | |description=CAGE_peak_at_chr11:67437863..67437876,- | ||
|id=chr11:67437863..67437876,- | |id=chr11:67437863..67437876,- | ||
|ontology_enrichment_celltype=CL:0002623;6.99e-16;3!CL:0000622;6.65e-10;5!CL:0000154;2.13e-08;6!CL:0000039;3.67e-07;7!CL:0000586;3.67e-07;7 | |ontology_enrichment_celltype=CL:0002251!9.07e-14!21;CL:0002076!6.93e-12!43;CL:0000223!6.62e-10!59;CL:0002623!5.22e-09!3;CL:0000622!5.53e-09!5;CL:0000154!1.83e-07!6;CL:0000150!3.76e-07!9;CL:0000066!5.67e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0002623;6.99e-16;3!CL:0000622;6.65e-10;5!CL:0000154;2.13e-08;6!CL:0000039;3.67e-07;7!CL:0000586;3.67e-07;7 | ||
|ontology_enrichment_disease=DOID:5093;3.55e-12;4!DOID:1612;3.55e-12;4!DOID:1325;3.67e-07;7!DOID:3904;3.67e-07;7!DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3910;9.27e-07;2!DOID:3498;9.27e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0002623,5.38e-16,3;CL:0000622,5.69e-10,5;CL:0000154,1.87e-08,6;CL:0000039,3.56e-07,7;CL:0000586,3.56e-07,7 | ||
|ontology_enrichment_uberon=UBERON:0006947;4.29e-16;3!UBERON:0004054;4.29e-16;3!UBERON:0001000;8.84e-13;1!UBERON:0005352;8.84e-13;1!UBERON:0007029;1.25e-12;1!UBERON:0000989;1.25e-12;1!UBERON:0000998;1.25e-12;1!UBERON:0008811;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0005904;2.61e-12;4!UBERON:0000058;1.14e-10;10!UBERON:0003135;7.62e-10;11!UBERON:0001044;2.13e-08;6!UBERON:0003293;2.13e-08;6!UBERON:0003294;2.13e-08;6!UBERON:0010047;2.13e-08;6!UBERON:0003408;2.13e-08;6!UBERON:0000167;2.13e-08;6!UBERON:0003101;2.17e-08;22!UBERON:0000079;2.17e-08;22!UBERON:0004903;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | |ontology_enrichment_development_v019=UBERON:0008425;7.02e-13;1!UBERON:0000358;1.25e-12;1!UBERON:0003124;1.25e-12;1!UBERON:0005754;1.25e-12;1!UBERON:0004874;1.25e-12;1!UBERON:0007297;6.07e-07;2 | ||
|ontology_enrichment_disease=DOID:305!2.22e-09!106;DOID:0050687!7.05e-09!143;DOID:1749!2.33e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.55e-12;4!DOID:1612;3.55e-12;4!DOID:1325;3.67e-07;7!DOID:3904;3.67e-07;7!DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3910;9.27e-07;2!DOID:3498;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.86e-12,4;DOID:1612,3.86e-12,4;DOID:1325,3.68e-07,7;DOID:3904,3.68e-07,7;DOID:4074,9.02e-07,2;DOID:4905,9.02e-07,2;DOID:3498,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.44e-11!5;UBERON:0000161!1.83e-10!35;UBERON:0000166!5.22e-10!21;UBERON:0003343!1.37e-09!4;UBERON:0004785!1.37e-09!4;UBERON:0006947!1.16e-08!3;UBERON:0004054!1.16e-08!3;UBERON:0000344!1.37e-08!12;UBERON:0000165!2.26e-08!28;UBERON:0000930!2.26e-08!28;UBERON:0003101!1.41e-07!22;UBERON:0000079!1.41e-07!22;UBERON:0001044!1.53e-07!6;UBERON:0003293!1.53e-07!6;UBERON:0003294!1.53e-07!6;UBERON:0010047!1.53e-07!6;UBERON:0000167!1.53e-07!6;UBERON:0005156!9.64e-07!59;UBERON:0000990!9.64e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.29e-16;3!UBERON:0004054;4.29e-16;3!UBERON:0001000;8.84e-13;1!UBERON:0005352;8.84e-13;1!UBERON:0007029;1.25e-12;1!UBERON:0000989;1.25e-12;1!UBERON:0000998;1.25e-12;1!UBERON:0008811;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0005904;2.61e-12;4!UBERON:0000058;1.14e-10;10!UBERON:0003135;7.62e-10;11!UBERON:0001044;2.13e-08;6!UBERON:0003293;2.13e-08;6!UBERON:0003294;2.13e-08;6!UBERON:0010047;2.13e-08;6!UBERON:0003408;2.13e-08;6!UBERON:0000167;2.13e-08;6!UBERON:0003101;2.17e-08;22!UBERON:0000079;2.17e-08;22!UBERON:0004903;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.98e-16,3;UBERON:0004054,3.98e-16,3;UBERON:0001000,8.85e-13,1;UBERON:0005352,8.85e-13,1;UBERON:0000989,9.92e-13,1;UBERON:0008811,9.92e-13,1;UBERON:0006258,9.92e-13,1;UBERON:0005876,9.92e-13,1;UBERON:0004874,9.92e-13,1;UBERON:0000998,1.11e-12,1;UBERON:0006868,1.11e-12,1;UBERON:0007029,1.40e-12,1;UBERON:0005904,2.47e-12,4;UBERON:0003135,6.97e-10,11;UBERON:0001044,1.87e-08,6;UBERON:0003293,1.87e-08,6;UBERON:0003294,1.87e-08,6;UBERON:0010047,1.87e-08,6;UBERON:0000167,1.87e-08,6;UBERON:0003101,2.24e-08,22;UBERON:0000079,2.24e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,1.10497186723076,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,13.9061399993951,0,0.227586896570999,1.27126825146383,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,1.1528195219403,1.97466817701499,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,5.12959723704208,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.587954384486266,0,0.17472666824203,0,0,0,0,0.872901148395775,0,0,0,0,0,0.586654148204409,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,2.97726707033577,0,0.511049710558381,0,0,0,0,2.48366636455389,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,1.53646629384555,8.2951159417691,0,0,0,2.54032230114557,0,0,0,0.559277158988962,0.098150233615243,0,0,0,0,2.4285549652957,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.852935927603924,0,0,0,0,0,0,0.217716747896961,0,0.673520530145875,0.286888821570705,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,1.10497186723076,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,13.9061399993951,0,0.227586896570999,1.27126825146383,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,1.1528195219403,1.97466817701499,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,5.12959723704208,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.587954384486266,0,0.17472666824203,0,0,0,0,0.872901148395775,0,0,0,0,0,0.586654148204409,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,2.97726707033577,0,0.511049710558381,0,0,0,0,2.48366636455389,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,1.53646629384555,8.2951159417691,0,0,0,2.54032230114557,0,0,0,0.559277158988962,0.098150233615243,0,0,0,0,2.4285549652957,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.852935927603924,0,0,0,0,0,0,0.217716747896961,0,0.673520530145875,0.286888821570705,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:67437863..67437876,- | |short_description=p@chr11:67437863..67437876,- | ||
}} | }} |
Latest revision as of 19:17, 19 September 2015
Short description: | p@chr11:67437863..67437876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:67437863..67437876, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.38e-16 | 3 |
acinar cell | 5.69e-10 | 5 |
protein secreting cell | 1.87e-08 | 6 |
germ line cell | 3.56e-07 | 7 |
germ cell | 3.56e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.98e-16 | 3 |
internal male genitalia | 3.98e-16 | 3 |
vas deferens | 8.85e-13 | 1 |
spermatic cord | 8.85e-13 | 1 |
penis | 9.92e-13 | 1 |
intromittent organ | 9.92e-13 | 1 |
lateral plate mesenchyme | 9.92e-13 | 1 |
undifferentiated genital tubercle | 9.92e-13 | 1 |
somatopleure | 9.92e-13 | 1 |
seminal vesicle | 1.11e-12 | 1 |
seminal fluid secreting gland | 1.11e-12 | 1 |
surface | 1.40e-12 | 1 |
duct of male reproductive system | 2.47e-12 | 4 |
male reproductive organ | 6.97e-10 | 11 |
saliva-secreting gland | 1.87e-08 | 6 |
gland of oral region | 1.87e-08 | 6 |
gland of foregut | 1.87e-08 | 6 |
oral gland | 1.87e-08 | 6 |
oral cavity | 1.87e-08 | 6 |
male organism | 2.24e-08 | 22 |
male reproductive system | 2.24e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.86e-12 | 4 |
breast cancer | 3.86e-12 | 4 |
bronchus cancer | 3.68e-07 | 7 |
bronchogenic carcinoma | 3.68e-07 | 7 |
pancreas adenocarcinoma | 9.02e-07 | 2 |
pancreatic carcinoma | 9.02e-07 | 2 |
pancreatic ductal adenocarcinoma | 9.02e-07 | 2 |