FFCP PHASE1:Hg19::chr2:134325832..134325855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |EntrezGene=344148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |HGNC=29847 | ||
|TSSclassifier=strong | |||
|UniProt=O14513 | |UniProt=O14513 | ||
|association_with_transcript=175bp_to_ENST00000409261,NM_207363,NM_207481,uc002ttp.2,uc002ttq.2,uc002ttt.1_5end | |association_with_transcript=175bp_to_ENST00000409261,NM_207363,NM_207481,uc002ttp.2,uc002ttq.2,uc002ttt.1_5end | ||
|cluster_id=chr2:134325832..134325855,- | |||
|description=CAGE_peak_7_at_NCKAP5_5end | |description=CAGE_peak_7_at_NCKAP5_5end | ||
|id=chr2:134325832..134325855,- | |id=chr2:134325832..134325855,- | ||
|ontology_enrichment_celltype=CL:1000306!9.31e-08!4;CL:0002547!9.31e-08!4 | |ontology_enrichment_celltype=CL:1000306!9.31e-08!4;CL:0002547!9.31e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000511;7.36e-18;1!CL:0002625;7.36e-18;1!CL:0000222;7.36e-18;1!CL:0002568;7.36e-18;1!CL:0000216;7.36e-18;1!CL:0000632;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.23e-18,1;CL:0002625,6.23e-18,1;CL:0000216,6.23e-18,1;CL:0002568,1.70e-17,1;CL:0000632,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;7.36e-18;1!DOID:3350;1.33e-09;2!DOID:3307;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.72e-18,1;DOID:3307,9.46e-10,2;DOID:3350,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000415!9.31e-08!4;UBERON:0007240!9.31e-08!4;UBERON:0005742!9.31e-08!4;UBERON:0005734!9.31e-08!4;UBERON:0004664!9.31e-08!4;UBERON:0004663!9.31e-08!4;UBERON:0000477!5.71e-07!286 | |ontology_enrichment_uberon=UBERON:0000415!9.31e-08!4;UBERON:0007240!9.31e-08!4;UBERON:0005742!9.31e-08!4;UBERON:0005734!9.31e-08!4;UBERON:0004664!9.31e-08!4;UBERON:0004663!9.31e-08!4;UBERON:0000477!5.71e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;7.36e-18;1!UBERON:0001136;7.36e-18;1!UBERON:0001343;7.36e-18;1!UBERON:0004910;7.36e-18;1!UBERON:0004813;7.36e-18;1!UBERON:0004909;1.33e-09;2!UBERON:0002114;8.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.16e-18,1;UBERON:0001136,6.23e-18,1;UBERON:0001343,6.23e-18,1;UBERON:0004910,6.23e-18,1;UBERON:0005154,6.23e-18,1;UBERON:0005295,6.23e-18,1;UBERON:0004813,6.23e-18,1;UBERON:0005297,6.23e-18,1;UBERON:0005294,6.23e-18,1;UBERON:0010141,6.23e-18,1;UBERON:0005891,6.23e-18,1;UBERON:0004909,1.22e-09,2 | |||
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| ||
|short_description=p7@NCKAP5 | |short_description=p7@NCKAP5 | ||
}} | }} |
Latest revision as of 00:50, 17 September 2015
Short description: | p7@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NCKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000409261, NM_207363, NM_207481, uc002ttp.2, uc002ttq.2, uc002ttt.1_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | O14513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.23e-18 | 1 |
seminiferous tubule epithelial cell | 6.23e-18 | 1 |
Sertoli cell | 6.23e-18 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.70e-17 | 1 |
hepatic stellate cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 3.16e-18 | 1 |
mesothelium | 6.23e-18 | 1 |
seminiferous tubule of testis | 6.23e-18 | 1 |
epithelium of male gonad | 6.23e-18 | 1 |
epithelial cord | 6.23e-18 | 1 |
sex cord | 6.23e-18 | 1 |
seminiferous tubule epithelium | 6.23e-18 | 1 |
testis sex cord | 6.23e-18 | 1 |
genital ridge | 6.23e-18 | 1 |
primitive sex cord of indifferent gonad | 6.23e-18 | 1 |
coelomic epithelium | 6.23e-18 | 1 |
epithelium of gonad | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.72e-18 | 1 |
teratoma | 9.46e-10 | 2 |
mesenchymal cell neoplasm | 1.44e-09 | 2 |