FFCP PHASE1:Hg19::chr2:74517994..74518001,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57835 | |EntrezGene=57835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |HGNC=18168 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNL6 | |UniProt=C9JNL6 | ||
|association_with_transcript=-162bp_to_ENST00000432728_5end | |association_with_transcript=-162bp_to_ENST00000432728_5end | ||
|cluster_id=chr2:74517994..74518001,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_12_at_SLC4A5_5end | |description=CAGE_peak_12_at_SLC4A5_5end | ||
|id=chr2:74517994..74518001,- | |id=chr2:74517994..74518001,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease=DOID:0060060!5.53e-17!1;DOID:0060061!5.53e-17!1;DOID:8691!5.53e-17!1 | |ontology_enrichment_disease=DOID:0060060!5.53e-17!1;DOID:0060061!5.53e-17!1;DOID:8691!5.53e-17!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.34e-66;1!DOID:0060061;3.34e-66;1!DOID:8691;3.34e-66;1!DOID:0060058;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.39e-66,1;DOID:0060061,2.39e-66,1;DOID:8691,2.39e-66,1;DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0009722!1.68e-22!11;UBERON:0007690!1.68e-22!11;UBERON:0001896!4.02e-21!3;UBERON:0005290!4.02e-21!3;UBERON:0010096!4.02e-21!3;UBERON:0008814!1.31e-16!15;UBERON:0002336!2.25e-16!1;UBERON:0001018!2.25e-16!1;UBERON:0002473!2.25e-16!1;UBERON:0005340!2.25e-16!1;UBERON:0002316!2.25e-16!1;UBERON:0003544!2.25e-16!1;UBERON:0001020!2.25e-16!1;UBERON:0005970!2.25e-16!1;UBERON:0002437!2.25e-16!1;UBERON:0002370!2.64e-16!4;UBERON:0005058!2.64e-16!4;UBERON:0009113!2.64e-16!4;UBERON:0003295!2.64e-16!4;UBERON:0005562!2.64e-16!4;UBERON:0000974!1.85e-14!10;UBERON:0000966!2.37e-13!5;UBERON:0005388!2.37e-13!5;UBERON:0001802!2.37e-13!5;UBERON:0002046!3.65e-13!5;UBERON:0004117!3.65e-13!5;UBERON:0007689!3.65e-13!5;UBERON:0007123!3.65e-13!5;UBERON:0003091!3.65e-13!5;UBERON:0003351!3.39e-11!6;UBERON:0004177!9.95e-10!7;UBERON:0000341!4.70e-09!2;UBERON:0005162!7.49e-09!2;UBERON:0000122!7.49e-09!2;UBERON:0002298!1.59e-08!8;UBERON:0000970!1.45e-07!20;UBERON:0002368!2.81e-07!35;UBERON:0002104!3.14e-07!21;UBERON:0003408!4.52e-07!10;UBERON:0001042!4.52e-07!10;UBERON:0009145!4.52e-07!10;UBERON:0000153!8.32e-07!129;UBERON:0007811!8.32e-07!129 | |ontology_enrichment_uberon=UBERON:0009722!1.68e-22!11;UBERON:0007690!1.68e-22!11;UBERON:0001896!4.02e-21!3;UBERON:0005290!4.02e-21!3;UBERON:0010096!4.02e-21!3;UBERON:0008814!1.31e-16!15;UBERON:0002336!2.25e-16!1;UBERON:0001018!2.25e-16!1;UBERON:0002473!2.25e-16!1;UBERON:0005340!2.25e-16!1;UBERON:0002316!2.25e-16!1;UBERON:0003544!2.25e-16!1;UBERON:0001020!2.25e-16!1;UBERON:0005970!2.25e-16!1;UBERON:0002437!2.25e-16!1;UBERON:0002370!2.64e-16!4;UBERON:0005058!2.64e-16!4;UBERON:0009113!2.64e-16!4;UBERON:0003295!2.64e-16!4;UBERON:0005562!2.64e-16!4;UBERON:0000974!1.85e-14!10;UBERON:0000966!2.37e-13!5;UBERON:0005388!2.37e-13!5;UBERON:0001802!2.37e-13!5;UBERON:0002046!3.65e-13!5;UBERON:0004117!3.65e-13!5;UBERON:0007689!3.65e-13!5;UBERON:0007123!3.65e-13!5;UBERON:0003091!3.65e-13!5;UBERON:0003351!3.39e-11!6;UBERON:0004177!9.95e-10!7;UBERON:0000341!4.70e-09!2;UBERON:0005162!7.49e-09!2;UBERON:0000122!7.49e-09!2;UBERON:0002298!1.59e-08!8;UBERON:0000970!1.45e-07!20;UBERON:0002368!2.81e-07!35;UBERON:0002104!3.14e-07!21;UBERON:0003408!4.52e-07!10;UBERON:0001042!4.52e-07!10;UBERON:0009145!4.52e-07!10;UBERON:0000153!8.32e-07!129;UBERON:0007811!8.32e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.96e-34;2!UBERON:0005058;5.96e-34;2!UBERON:0009113;5.96e-34;2!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0004177;1.71e-14;5!UBERON:0005057;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000974,6.56e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00268647389276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.129177819672012,1.55186785739645,0,0.190941474834495,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00268647389276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.129177819672012,1.55186785739645,0,0.190941474834495,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@SLC4A5 | |short_description=p12@SLC4A5 | ||
}} | }} |
Latest revision as of 10:37, 18 September 2015
Short description: | p12@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC4A5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -162bp_to_ENST00000432728_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | C9JNL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
neck | 6.56e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.39e-66 | 1 |
cutaneous T cell lymphoma | 2.39e-66 | 1 |
mycosis fungoides | 2.39e-66 | 1 |
lymphoma | 6.13e-08 | 10 |